RNA–Protein interactions for RNA: ENST00000508070.1

HMGCR-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 3

Gene HMGCR, Length 450 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-206ENST00000508070 CDK11AQ9UQ88 783 aaPredicted RBP13.14□□□□□ -0.31
HMGCR-206ENST00000508070 DMRT2Q9Y5R5 561 aa13.14□□□□□ -0.31
HMGCR-206ENST00000508070 ATP10AO60312 1499 aa13.13□□□□□ -0.31
HMGCR-206ENST00000508070 HECW1Q76N89 1606 aa13.11□□□□□ -0.31
HMGCR-206ENST00000508070 TTC37Q6PGP7 1564 aa13.11□□□□□ -0.31
HMGCR-206ENST00000508070 ATP1B4Q9UN42 357 aaPredicted RBP13.1□□□□□ -0.31
HMGCR-206ENST00000508070 CEBPAP49715 358 aaPredicted RBP13.09□□□□□ -0.31
HMGCR-206ENST00000508070 C9orf84Q5VXU9 1444 aa13.09□□□□□ -0.31
HMGCR-206ENST00000508070 CDK13Q14004 1512 aaKnown RBP13.08□□□□□ -0.32
HMGCR-206ENST00000508070 ARHGEF12Q9NZN5 1544 aa13.08□□□□□ -0.32
HMGCR-206ENST00000508070 AFAP1Q8N556 730 aa13.07□□□□□ -0.32
HMGCR-206ENST00000508070 FMN1Q68DA7 1419 aa13.06□□□□□ -0.32
HMGCR-206ENST00000508070 SIGLEC1Q9BZZ2 1709 aa13.06□□□□□ -0.32
HMGCR-206ENST00000508070 UBTFP17480 764 aaKnown RBP13.06□□□□□ -0.32
HMGCR-206ENST00000508070 MYT1LQ9UL68 1186 aa13.06□□□□□ -0.32
HMGCR-206ENST00000508070 FER1L4A9Z1Z3 1794 aa13.05□□□□□ -0.32
HMGCR-206ENST00000508070 SETD1BQ9UPS6 1966 aaKnown RBP13.04□□□□□ -0.32
HMGCR-206ENST00000508070 ZNF518AQ6AHZ1 1483 aa13.04□□□□□ -0.32
HMGCR-206ENST00000508070 ESF1Q9H501 851 aaKnown RBP13.03□□□□□ -0.32
HMGCR-206ENST00000508070 UHRF1BP1Q6BDS2 1440 aa13.03□□□□□ -0.32
HMGCR-206ENST00000508070 TROQ12816 1431 aaPredicted RBP13.02□□□□□ -0.33
HMGCR-206ENST00000508070 DISP3Q9P2K9 1392 aa13.01□□□□□ -0.33
HMGCR-206ENST00000508070 PTPRTO14522 1441 aa13.01□□□□□ -0.33
HMGCR-206ENST00000508070 PREX1Q8TCU6 1659 aa13.01□□□□□ -0.33
HMGCR-206ENST00000508070 CLIP1P30622 1438 aa13□□□□□ -0.33
HMGCR-206ENST00000508070 SOCS7O14512 581 aa13□□□□□ -0.33
HMGCR-206ENST00000508070 MYO5CQ9NQX4 1742 aa12.99□□□□□ -0.33
HMGCR-206ENST00000508070 ARHGAP5Q13017 1502 aa12.98□□□□□ -0.33
HMGCR-206ENST00000508070 MLH3Q9UHC1 1453 aa12.98□□□□□ -0.33
HMGCR-206ENST00000508070 ILDR2Q71H61 639 aa12.98□□□□□ -0.33
HMGCR-206ENST00000508070 KDM5CP41229 1560 aa12.98□□□□□ -0.33
HMGCR-206ENST00000508070 ARHGAP35Q9NRY4 1499 aa12.97□□□□□ -0.33
HMGCR-206ENST00000508070 TRAPPC8Q9Y2L5 1435 aa12.97□□□□□ -0.33
HMGCR-206ENST00000508070 EHMT2Q96KQ7 1210 aa12.97□□□□□ -0.33
HMGCR-206ENST00000508070 STRCQ7RTU9 1775 aa12.97□□□□□ -0.33
HMGCR-206ENST00000508070 REREQ9P2R6 1566 aa12.96□□□□□ -0.33
HMGCR-206ENST00000508070 KIF14Q15058 1648 aa12.95□□□□□ -0.34
HMGCR-206ENST00000508070 AGLP35573 1532 aa12.95□□□□□ -0.34
HMGCR-206ENST00000508070 CNTLNQ9NXG0 1405 aa12.94□□□□□ -0.34
HMGCR-206ENST00000508070 DIP2CQ9Y2E4 1556 aa12.94□□□□□ -0.34
HMGCR-206ENST00000508070 IQSEC2Q5JU85 1478 aa12.91□□□□□ -0.34
HMGCR-206ENST00000508070 NPATQ14207 1427 aa12.89□□□□□ -0.35
HMGCR-206ENST00000508070 NCOA1Q15788 1441 aa12.89□□□□□ -0.35
HMGCR-206ENST00000508070 LTBP4Q8N2S1 1624 aa12.89□□□□□ -0.35
HMGCR-206ENST00000508070 ZMYM3Q14202 1370 aa12.89□□□□□ -0.35
HMGCR-206ENST00000508070 C3P01024 1663 aa12.89□□□□□ -0.35
HMGCR-206ENST00000508070 CASKIN1Q8WXD9 1431 aa12.88□□□□□ -0.35
HMGCR-206ENST00000508070 ABCA6Q8N139 1617 aa12.88□□□□□ -0.35
HMGCR-206ENST00000508070 CDC42BPBQ9Y5S2 1711 aa12.88□□□□□ -0.35
HMGCR-206ENST00000508070 ABCC1P33527 1531 aa12.88□□□□□ -0.35
HMGCR-206ENST00000508070 SPAG9O60271 1321 aaKnown RBP12.88□□□□□ -0.35
HMGCR-206ENST00000508070 CCDC18Q5T9S5 1454 aa12.87□□□□□ -0.35
HMGCR-206ENST00000508070 PKD2Q13563 968 aa12.87□□□□□ -0.35
HMGCR-206ENST00000508070 ZNF777Q9ULD5 760 aaPredicted RBP12.87□□□□□ -0.35
HMGCR-206ENST00000508070 HNRNPMP52272 730 aaKnown RBP eCLIP12.86□□□□□ -0.35
HMGCR-206ENST00000508070 PPP6R1Q9UPN7 881 aa12.86□□□□□ -0.35
HMGCR-206ENST00000508070 NCKAP5LQ9HCH0 1330 aa12.86□□□□□ -0.35
HMGCR-206ENST00000508070 PREX2Q70Z35 1606 aa12.84□□□□□ -0.35
HMGCR-206ENST00000508070 KIDINS220Q9ULH0 1771 aa12.84□□□□□ -0.35
HMGCR-206ENST00000508070 UBAP1LF5GYI3 381 aa12.84□□□□□ -0.35
HMGCR-206ENST00000508070 CAMSAP1Q5T5Y3 1602 aa12.83□□□□□ -0.36
HMGCR-206ENST00000508070 ITSN2Q9NZM3 1697 aa12.83□□□□□ -0.36
HMGCR-206ENST00000508070 KIAA1107Q9UPP5 1409 aa12.82□□□□□ -0.36
HMGCR-206ENST00000508070 CFDP1Q9UEE9 299 aaPredicted RBP12.82□□□□□ -0.36
HMGCR-206ENST00000508070 ZNF335Q9H4Z2 1342 aaPredicted RBP12.82□□□□□ -0.36
HMGCR-206ENST00000508070 LRRIQ1Q96JM4 1722 aa12.82□□□□□ -0.36
HMGCR-206ENST00000508070 SPATA31D1Q6ZQQ2 1576 aa12.81□□□□□ -0.36
HMGCR-206ENST00000508070 SAMD9LQ8IVG5 1584 aa12.81□□□□□ -0.36
HMGCR-206ENST00000508070 GGT6Q6P531 493 aa12.81□□□□□ -0.36
HMGCR-206ENST00000508070 GPATCH8Q9UKJ3 1502 aaKnown RBP12.81□□□□□ -0.36
HMGCR-206ENST00000508070 PLEKHH2Q8IVE3 1493 aa12.8□□□□□ -0.36
HMGCR-206ENST00000508070 MROH2AA6NES4 1674 aa12.8□□□□□ -0.36
HMGCR-206ENST00000508070 PLA2R1Q13018 1463 aa12.79□□□□□ -0.36
HMGCR-206ENST00000508070 PTPRKQ15262 1439 aa12.79□□□□□ -0.36
HMGCR-206ENST00000508070 A2MP01023 1474 aa12.78□□□□□ -0.36
HMGCR-206ENST00000508070 CDC42BPAQ5VT25 1732 aa12.78□□□□□ -0.36
HMGCR-206ENST00000508070 FYCO1Q9BQS8 1478 aa12.78□□□□□ -0.36
HMGCR-206ENST00000508070 CCNB3Q8WWL7 1395 aa12.77□□□□□ -0.37
HMGCR-206ENST00000508070 TCOF1Q13428 1488 aaKnown RBP12.77□□□□□ -0.37
HMGCR-206ENST00000508070 ATP7AQ04656 1500 aa12.76□□□□□ -0.37
HMGCR-206ENST00000508070 SYCP2Q9BX26 1530 aa12.76□□□□□ -0.37
HMGCR-206ENST00000508070 SUPT6HQ7KZ85 1726 aaKnown RBP12.74□□□□□ -0.37
HMGCR-206ENST00000508070 TOM1O60784 492 aa12.74□□□□□ -0.37
HMGCR-206ENST00000508070 PLXNC1O60486 1568 aa12.73□□□□□ -0.37
HMGCR-206ENST00000508070 CEP170BQ9Y4F5 1589 aaPredicted RBP12.73□□□□□ -0.37
HMGCR-206ENST00000508070 MTUS2Q5JR59 1369 aa12.72□□□□□ -0.37
HMGCR-206ENST00000508070 DHX29Q7Z478 1369 aaKnown RBP12.72□□□□□ -0.37
HMGCR-206ENST00000508070 CLTCQ00610 1675 aaKnown RBP12.72□□□□□ -0.37
HMGCR-206ENST00000508070 A2ML1A8K2U0 1454 aa12.72□□□□□ -0.37
HMGCR-206ENST00000508070 RTEL1-TNFRSF6BF6WH68 1400 aa12.71□□□□□ -0.37
HMGCR-206ENST00000508070 ZNF644Q9H582 1327 aaPredicted RBP12.71□□□□□ -0.37
HMGCR-206ENST00000508070 RSPH4AQ5TD94 716 aa12.71□□□□□ -0.37
HMGCR-206ENST00000508070 ANKLE2Q86XL3 938 aa12.71□□□□□ -0.37
HMGCR-206ENST00000508070 ZNF142P52746 1687 aaPredicted RBP12.7□□□□□ -0.38
HMGCR-206ENST00000508070 MYO3AQ8NEV4 1616 aa12.7□□□□□ -0.38
HMGCR-206ENST00000508070 INO80Q9ULG1 1556 aaPredicted RBP12.7□□□□□ -0.38
HMGCR-206ENST00000508070 KIF3BO15066 747 aa12.7□□□□□ -0.38
HMGCR-206ENST00000508070 HSPA1LP34931 641 aa12.7□□□□□ -0.38
HMGCR-206ENST00000508070 THEMISQ8N1K5 641 aaPredicted RBP12.7□□□□□ -0.38
HMGCR-206ENST00000508070 FBXO31Q5XUX0 539 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms