RNA–Protein interactions for RNA: ENST00000507816.5

SEC31A-223, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 4

Gene SEC31A, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-223	ENST00000507816	FER1L4	A9Z1Z3	1794 aa		33.35	■■■□□ 2.93
SEC31A-223	ENST00000507816	MLEC	Q14165	292 aa		33.33	■■■□□ 2.93
SEC31A-223	ENST00000507816	ARHGEF12	Q9NZN5	1544 aa		33.33	■■■□□ 2.93
SEC31A-223	ENST00000507816	ATP10A	O60312	1499 aa		33.31	■■■□□ 2.92
SEC31A-223	ENST00000507816	C9orf84	Q5VXU9	1444 aa		33.31	■■■□□ 2.92
SEC31A-223	ENST00000507816	FMN1	Q68DA7	1419 aa		33.28	■■■□□ 2.92
SEC31A-223	ENST00000507816	EFCAB2	Q5VUJ9	269 aa		33.26	■■■□□ 2.91
SEC31A-223	ENST00000507816	MYO5C	Q9NQX4	1742 aa		33.25	■■■□□ 2.91
SEC31A-223	ENST00000507816	CERK	Q8TCT0	537 aa		33.23	■■■□□ 2.91
SEC31A-223	ENST00000507816	ZNF518A	Q6AHZ1	1483 aa		33.22	■■■□□ 2.91
SEC31A-223	ENST00000507816	CDK11A	Q9UQ88	783 aa	Predicted RBP	33.2	■■■□□ 2.91
SEC31A-223	ENST00000507816	KIF14	Q15058	1648 aa		33.2	■■■□□ 2.9
SEC31A-223	ENST00000507816	PREX1	Q8TCU6	1659 aa		33.2	■■■□□ 2.9
SEC31A-223	ENST00000507816	ARHGAP35	Q9NRY4	1499 aa		33.18	■■■□□ 2.9
SEC31A-223	ENST00000507816	ATP1B4	Q9UN42	357 aa	Predicted RBP	33.18	■■■□□ 2.9
SEC31A-223	ENST00000507816	KDM5C	P41229	1560 aa		33.17	■■■□□ 2.9
SEC31A-223	ENST00000507816	TRO	Q12816	1431 aa	Predicted RBP	33.16	■■■□□ 2.9
SEC31A-223	ENST00000507816	ARHGAP5	Q13017	1502 aa		33.14	■■■□□ 2.9
SEC31A-223	ENST00000507816	UBTF	P17480	764 aa	Known RBP	33.12	■■■□□ 2.89
SEC31A-223	ENST00000507816	CLIP1	P30622	1438 aa		33.11	■■■□□ 2.89
SEC31A-223	ENST00000507816	CEBPA	P49715	358 aa	Predicted RBP	33.1	■■■□□ 2.89
SEC31A-223	ENST00000507816	RERE	Q9P2R6	1566 aa		33.09	■■■□□ 2.89
SEC31A-223	ENST00000507816	DIP2C	Q9Y2E4	1556 aa		33.08	■■■□□ 2.89
SEC31A-223	ENST00000507816	AFAP1	Q8N556	730 aa		33.07	■■■□□ 2.88
SEC31A-223	ENST00000507816	UHRF1BP1	Q6BDS2	1440 aa		33.06	■■■□□ 2.88
SEC31A-223	ENST00000507816	EHMT2	Q96KQ7	1210 aa		33.04	■■■□□ 2.88
SEC31A-223	ENST00000507816	DMRT2	Q9Y5R5	561 aa		33.03	■■■□□ 2.88
SEC31A-223	ENST00000507816	MLH3	Q9UHC1	1453 aa		33.02	■■■□□ 2.88
SEC31A-223	ENST00000507816	ABCA6	Q8N139	1617 aa		32.99	■■■□□ 2.87
SEC31A-223	ENST00000507816	STRC	Q7RTU9	1775 aa		32.99	■■■□□ 2.87
SEC31A-223	ENST00000507816	MYT1L	Q9UL68	1186 aa		32.98	■■■□□ 2.87
SEC31A-223	ENST00000507816	AGL	P35573	1532 aa		32.97	■■■□□ 2.87
SEC31A-223	ENST00000507816	LRRIQ1	Q96JM4	1722 aa		32.97	■■■□□ 2.87
SEC31A-223	ENST00000507816	ABCC1	P33527	1531 aa		32.96	■■■□□ 2.87
SEC31A-223	ENST00000507816	PREX2	Q70Z35	1606 aa		32.95	■■■□□ 2.86
SEC31A-223	ENST00000507816	CDC42BPB	Q9Y5S2	1711 aa		32.94	■■■□□ 2.86
SEC31A-223	ENST00000507816	TRAPPC8	Q9Y2L5	1435 aa		32.92	■■■□□ 2.86
SEC31A-223	ENST00000507816	CCDC18	Q5T9S5	1454 aa		32.91	■■■□□ 2.86
SEC31A-223	ENST00000507816	C3	P01024	1663 aa		32.91	■■■□□ 2.86
SEC31A-223	ENST00000507816	SETD1B	Q9UPS6	1966 aa	Known RBP	32.9	■■■□□ 2.86
SEC31A-223	ENST00000507816	PTPRT	O14522	1441 aa		32.9	■■■□□ 2.86
SEC31A-223	ENST00000507816	ITSN2	Q9NZM3	1697 aa		32.88	■■■□□ 2.85
SEC31A-223	ENST00000507816	CASKIN1	Q8WXD9	1431 aa		32.87	■■■□□ 2.85
SEC31A-223	ENST00000507816	ESF1	Q9H501	851 aa	Known RBP	32.86	■■■□□ 2.85
SEC31A-223	ENST00000507816	CNTLN	Q9NXG0	1405 aa		32.84	■■■□□ 2.85
SEC31A-223	ENST00000507816	KIDINS220	Q9ULH0	1771 aa		32.81	■■■□□ 2.84
SEC31A-223	ENST00000507816	DISP3	Q9P2K9	1392 aa		32.79	■■■□□ 2.84
SEC31A-223	ENST00000507816	NCOA1	Q15788	1441 aa		32.77	■■■□□ 2.84
SEC31A-223	ENST00000507816	CDC42BPA	Q5VT25	1732 aa		32.75	■■■□□ 2.83
SEC31A-223	ENST00000507816	LTBP4	Q8N2S1	1624 aa		32.74	■■■□□ 2.83
SEC31A-223	ENST00000507816	SAMD9L	Q8IVG5	1584 aa		32.74	■■■□□ 2.83
SEC31A-223	ENST00000507816	CHIC1	Q5VXU3	224 aa		32.73	■■■□□ 2.83
SEC31A-223	ENST00000507816	NPAT	Q14207	1427 aa		32.73	■■■□□ 2.83
SEC31A-223	ENST00000507816	FYCO1	Q9BQS8	1478 aa		32.73	■■■□□ 2.83
SEC31A-223	ENST00000507816	IQSEC2	Q5JU85	1478 aa		32.72	■■■□□ 2.83
SEC31A-223	ENST00000507816	MROH2A	A6NES4	1674 aa		32.69	■■■□□ 2.82
SEC31A-223	ENST00000507816	SYCP2	Q9BX26	1530 aa		32.68	■■■□□ 2.82
SEC31A-223	ENST00000507816	ILDR2	Q71H61	639 aa		32.68	■■■□□ 2.82
SEC31A-223	ENST00000507816	CAMSAP1	Q5T5Y3	1602 aa		32.64	■■■□□ 2.82
SEC31A-223	ENST00000507816	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.64	■■■□□ 2.82
SEC31A-223	ENST00000507816	SPATA31D1	Q6ZQQ2	1576 aa		32.63	■■■□□ 2.81
SEC31A-223	ENST00000507816	SPAG9	O60271	1321 aa	Known RBP	32.63	■■■□□ 2.81
SEC31A-223	ENST00000507816	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.63	■■■□□ 2.81
SEC31A-223	ENST00000507816	ZMYM3	Q14202	1370 aa		32.62	■■■□□ 2.81
SEC31A-223	ENST00000507816	SOCS7	O14512	581 aa		32.6	■■■□□ 2.81
SEC31A-223	ENST00000507816	PLXNC1	O60486	1568 aa		32.6	■■■□□ 2.81
SEC31A-223	ENST00000507816	ATP7A	Q04656	1500 aa		32.6	■■■□□ 2.81
SEC31A-223	ENST00000507816	KIAA1107	Q9UPP5	1409 aa		32.6	■■■□□ 2.81
SEC31A-223	ENST00000507816	PLEKHH2	Q8IVE3	1493 aa		32.58	■■■□□ 2.81
SEC31A-223	ENST00000507816	INO80	Q9ULG1	1556 aa	Predicted RBP	32.58	■■■□□ 2.81
SEC31A-223	ENST00000507816	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.55	■■■□□ 2.8
SEC31A-223	ENST00000507816	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.55	■■■□□ 2.8
SEC31A-223	ENST00000507816	A2M	P01023	1474 aa		32.54	■■■□□ 2.8
SEC31A-223	ENST00000507816	ZNF142	P52746	1687 aa	Predicted RBP	32.53	■■■□□ 2.8
SEC31A-223	ENST00000507816	PLA2R1	Q13018	1463 aa		32.53	■■■□□ 2.8
SEC31A-223	ENST00000507816	MYO3A	Q8NEV4	1616 aa		32.52	■■■□□ 2.8
SEC31A-223	ENST00000507816	CLTC	Q00610	1675 aa	Known RBP	32.51	■■■□□ 2.79
SEC31A-223	ENST00000507816	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.5	■■■□□ 2.79
SEC31A-223	ENST00000507816	PTPRK	Q15262	1439 aa		32.49	■■■□□ 2.79
SEC31A-223	ENST00000507816	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.49	■■■□□ 2.79
SEC31A-223	ENST00000507816	NCKAP5L	Q9HCH0	1330 aa		32.49	■■■□□ 2.79
SEC31A-223	ENST00000507816	CCNB3	Q8WWL7	1395 aa		32.48	■■■□□ 2.79
SEC31A-223	ENST00000507816	PKD2	Q13563	968 aa		32.47	■■■□□ 2.79
SEC31A-223	ENST00000507816	TCOF1	Q13428	1488 aa	Known RBP	32.47	■■■□□ 2.79
SEC31A-223	ENST00000507816	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.46	■■■□□ 2.79
SEC31A-223	ENST00000507816	GGT6	Q6P531	493 aa		32.41	■■■□□ 2.78
SEC31A-223	ENST00000507816	PPP6R1	Q9UPN7	881 aa		32.41	■■■□□ 2.78
SEC31A-223	ENST00000507816	MTUS2	Q5JR59	1369 aa		32.4	■■■□□ 2.78
SEC31A-223	ENST00000507816	ADGB	Q8N7X0	1667 aa		32.39	■■■□□ 2.78
SEC31A-223	ENST00000507816	UBAP1L	F5GYI3	381 aa		32.36	■■■□□ 2.77
SEC31A-223	ENST00000507816	TIAM1	Q13009	1591 aa		32.34	■■■□□ 2.77
SEC31A-223	ENST00000507816	A2ML1	A8K2U0	1454 aa		32.34	■■■□□ 2.77
SEC31A-223	ENST00000507816	MBD5	Q9P267	1494 aa		32.34	■■■□□ 2.77
SEC31A-223	ENST00000507816	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.32	■■■□□ 2.76
SEC31A-223	ENST00000507816	EHBP1L1	Q8N3D4	1523 aa		32.31	■■■□□ 2.76
SEC31A-223	ENST00000507816	ZNF644	Q9H582	1327 aa	Predicted RBP	32.29	■■■□□ 2.76
SEC31A-223	ENST00000507816	DNMT1	P26358	1616 aa	Known RBP	32.27	■■■□□ 2.76
SEC31A-223	ENST00000507816	DHX29	Q7Z478	1369 aa	Known RBP	32.26	■■■□□ 2.75
SEC31A-223	ENST00000507816	CEP162	Q5TB80	1403 aa		32.25	■■■□□ 2.75
SEC31A-223	ENST00000507816	FAM135A	Q9P2D6	1515 aa		32.23	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms