RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 RAPGEF3O95398 923 aa21.55■■□□□ 1.04
PDCD6-204ENST00000506909 FBXO41Q8TF61 875 aa21.55■■□□□ 1.04
PDCD6-204ENST00000506909 MTUS2Q5JR59 1369 aa21.55■■□□□ 1.04
PDCD6-204ENST00000506909 DENND4BO75064 1496 aaPredicted RBP21.55■■□□□ 1.04
PDCD6-204ENST00000506909 ARHGAP5Q13017 1502 aa21.54■■□□□ 1.04
PDCD6-204ENST00000506909 EHBP1L1Q8N3D4 1523 aa21.53■■□□□ 1.04
PDCD6-204ENST00000506909 HECW2Q9P2P5 1572 aa21.53■■□□□ 1.04
PDCD6-204ENST00000506909 ADGRL1O94910 1474 aa21.52■■□□□ 1.04
PDCD6-204ENST00000506909 TIAM1Q13009 1591 aa21.52■■□□□ 1.04
PDCD6-204ENST00000506909 SCAPERQ9BY12 1400 aa21.5■■□□□ 1.03
PDCD6-204ENST00000506909 MAP3K1Q13233 1512 aa21.49■■□□□ 1.03
PDCD6-204ENST00000506909 ZMYM4Q5VZL5 1548 aa21.47■■□□□ 1.03
PDCD6-204ENST00000506909 GPATCH8Q9UKJ3 1502 aaKnown RBP21.47■■□□□ 1.03
PDCD6-204ENST00000506909 SUPT6HQ7KZ85 1726 aaKnown RBP21.46■■□□□ 1.03
PDCD6-204ENST00000506909 POGZQ7Z3K3 1410 aa21.45■■□□□ 1.02
PDCD6-204ENST00000506909 CCNB3Q8WWL7 1395 aa21.44■■□□□ 1.02
PDCD6-204ENST00000506909 ITSN2Q9NZM3 1697 aa21.44■■□□□ 1.02
PDCD6-204ENST00000506909 LMTK3Q96Q04 1460 aa21.43■■□□□ 1.02
PDCD6-204ENST00000506909 ABCC1P33527 1531 aa21.42■■□□□ 1.02
PDCD6-204ENST00000506909 MAGI2Q86UL8 1455 aa21.42■■□□□ 1.02
PDCD6-204ENST00000506909 ZNF518AQ6AHZ1 1483 aa21.41■■□□□ 1.02
PDCD6-204ENST00000506909 LRRC9Q6ZRR7 1453 aa21.41■■□□□ 1.02
PDCD6-204ENST00000506909 ARHGEF40Q8TER5 1519 aa21.4■■□□□ 1.02
PDCD6-204ENST00000506909 SAMD9LQ8IVG5 1584 aa21.4■■□□□ 1.02
PDCD6-204ENST00000506909 KDM5CP41229 1560 aa21.39■■□□□ 1.01
PDCD6-204ENST00000506909 NCOA2Q15596 1464 aa21.39■■□□□ 1.01
PDCD6-204ENST00000506909 CFDP1Q9UEE9 299 aaPredicted RBP21.38■■□□□ 1.01
PDCD6-204ENST00000506909 ZFYVE16Q7Z3T8 1539 aa21.38■■□□□ 1.01
PDCD6-204ENST00000506909 ARHGEF12Q9NZN5 1544 aa21.38■■□□□ 1.01
PDCD6-204ENST00000506909 AFAP1Q8N556 730 aa21.35■■□□□ 1.01
PDCD6-204ENST00000506909 ZNF777Q9ULD5 760 aaPredicted RBP21.35■■□□□ 1.01
PDCD6-204ENST00000506909 PLEKHH2Q8IVE3 1493 aa21.34■■□□□ 1.01
PDCD6-204ENST00000506909 APLP2Q06481 763 aa21.34■■□□□ 1.01
PDCD6-204ENST00000506909 KANK4Q5T7N3 995 aaPredicted RBP21.34■■□□□ 1.01
PDCD6-204ENST00000506909 KIAA1107Q9UPP5 1409 aa21.34■■□□□ 1.01
PDCD6-204ENST00000506909 YEATS2Q9ULM3 1422 aa21.33■■□□□ 1.01
PDCD6-204ENST00000506909 TRAPPC8Q9Y2L5 1435 aa21.33■■□□□ 1.01
PDCD6-204ENST00000506909 SYCP2Q9BX26 1530 aa21.32■■□□□ 1
PDCD6-204ENST00000506909 MLH3Q9UHC1 1453 aa21.32■■□□□ 1
PDCD6-204ENST00000506909 BCORL1Q5H9F3 1711 aa21.29■■□□□ 1
PDCD6-204ENST00000506909 ATP10AO60312 1499 aa21.29■■□□□ 1
PDCD6-204ENST00000506909 KIDINS220Q9ULH0 1771 aa21.28■■□□□ 1
PDCD6-204ENST00000506909 HNRNPMP52272 730 aaKnown RBP eCLIP21.28■■□□□ 12e-7■■■■■ 37.9
PDCD6-204ENST00000506909 SIGLEC1Q9BZZ2 1709 aa21.28■■□□□ 1
PDCD6-204ENST00000506909 ADAMTSL3P82987 1691 aa21.28■■□□□ 1
PDCD6-204ENST00000506909 SOCS7O14512 581 aa21.26■□□□□ 0.99
PDCD6-204ENST00000506909 ZNF644Q9H582 1327 aaPredicted RBP21.26■□□□□ 0.99
PDCD6-204ENST00000506909 C9orf84Q5VXU9 1444 aa21.25■□□□□ 0.99
PDCD6-204ENST00000506909 DIP2CQ9Y2E4 1556 aa21.25■□□□□ 0.99
PDCD6-204ENST00000506909 ABCA6Q8N139 1617 aa21.25■□□□□ 0.99
PDCD6-204ENST00000506909 ARID4BQ4LE39 1312 aaPredicted RBP21.25■□□□□ 0.99
PDCD6-204ENST00000506909 MYT1LQ9UL68 1186 aa21.23■□□□□ 0.99
PDCD6-204ENST00000506909 MBD5Q9P267 1494 aa21.23■□□□□ 0.99
PDCD6-204ENST00000506909 REREQ9P2R6 1566 aa21.23■□□□□ 0.99
PDCD6-204ENST00000506909 CAMSAP2Q08AD1 1489 aa21.22■□□□□ 0.99
PDCD6-204ENST00000506909 MYOM3Q5VTT5 1437 aa21.21■□□□□ 0.99
PDCD6-204ENST00000506909 MIA2Q96PC5 1412 aa21.21■□□□□ 0.99
PDCD6-204ENST00000506909 INO80Q9ULG1 1556 aaPredicted RBP21.2■□□□□ 0.98
PDCD6-204ENST00000506909 SPAG9O60271 1321 aaKnown RBP21.2■□□□□ 0.98
PDCD6-204ENST00000506909 ATP7AQ04656 1500 aa21.19■□□□□ 0.98
PDCD6-204ENST00000506909 RSPH4AQ5TD94 716 aa21.19■□□□□ 0.98
PDCD6-204ENST00000506909 ILDR2Q71H61 639 aa21.18■□□□□ 0.98
PDCD6-204ENST00000506909 ARHGEF5Q12774 1597 aa21.17■□□□□ 0.98
PDCD6-204ENST00000506909 MADDQ8WXG6 1647 aa21.17■□□□□ 0.98
PDCD6-204ENST00000506909 AGLP35573 1532 aa21.15■□□□□ 0.98
PDCD6-204ENST00000506909 CCDC141Q6ZP82 1450 aa21.15■□□□□ 0.98
PDCD6-204ENST00000506909 RTEL1-TNFRSF6BF6WH68 1400 aa21.14■□□□□ 0.98
PDCD6-204ENST00000506909 ADGBQ8N7X0 1667 aa21.14■□□□□ 0.97
PDCD6-204ENST00000506909 FER1L4A9Z1Z3 1794 aa21.13■□□□□ 0.97
PDCD6-204ENST00000506909 RIMS1Q86UR5 1692 aaKnown RBP21.12■□□□□ 0.97
PDCD6-204ENST00000506909 PTPRMP28827 1452 aa21.11■□□□□ 0.97
PDCD6-204ENST00000506909 PTPN23Q9H3S7 1636 aa21.11■□□□□ 0.97
PDCD6-204ENST00000506909 PLXNC1O60486 1568 aa21.08■□□□□ 0.97
PDCD6-204ENST00000506909 MLECQ14165 292 aa21.08■□□□□ 0.97
PDCD6-204ENST00000506909 A2MP01023 1474 aa21.07■□□□□ 0.96
PDCD6-204ENST00000506909 FGD6Q6ZV73 1430 aa21.07■□□□□ 0.96
PDCD6-204ENST00000506909 TSPY4P0CV99 314 aa21.07■□□□□ 0.96
PDCD6-204ENST00000506909 TSPY10P0CW01 314 aa21.07■□□□□ 0.96
PDCD6-204ENST00000506909 MAST1Q9Y2H9 1570 aa21.06■□□□□ 0.96
PDCD6-204ENST00000506909 TCOF1Q13428 1488 aaKnown RBP21.05■□□□□ 0.96
PDCD6-204ENST00000506909 DISP3Q9P2K9 1392 aa21.04■□□□□ 0.96
PDCD6-204ENST00000506909 CROCC2H7BZ55 1655 aa21.02■□□□□ 0.96
PDCD6-204ENST00000506909 DNMT1P26358 1616 aaKnown RBP21.01■□□□□ 0.95
PDCD6-204ENST00000506909 DHX29Q7Z478 1369 aaKnown RBP21■□□□□ 0.95
PDCD6-204ENST00000506909 SETD1BQ9UPS6 1966 aaKnown RBP20.97■□□□□ 0.95
PDCD6-204ENST00000506909 ABCC5O15440 1437 aa20.97■□□□□ 0.95
PDCD6-204ENST00000506909 SHANK2Q9UPX8 1470 aa20.97■□□□□ 0.95
PDCD6-204ENST00000506909 DAPK1P53355 1430 aa20.95■□□□□ 0.95
PDCD6-204ENST00000506909 MROH2AA6NES4 1674 aa20.95■□□□□ 0.94
PDCD6-204ENST00000506909 C3P01024 1663 aa20.95■□□□□ 0.94
PDCD6-204ENST00000506909 CNTLNQ9NXG0 1405 aa20.95■□□□□ 0.94
PDCD6-204ENST00000506909 ESF1Q9H501 851 aaKnown RBP20.94■□□□□ 0.94
PDCD6-204ENST00000506909 PPP6R1Q9UPN7 881 aa20.93■□□□□ 0.94
PDCD6-204ENST00000506909 CLTCQ00610 1675 aaKnown RBP20.91■□□□□ 0.94
PDCD6-204ENST00000506909 GGT6Q6P531 493 aa20.91■□□□□ 0.94
PDCD6-204ENST00000506909 EIF2AK4Q9P2K8 1649 aaKnown RBP20.9■□□□□ 0.94
PDCD6-204ENST00000506909 KIF3BO15066 747 aa20.9■□□□□ 0.94
PDCD6-204ENST00000506909 PPARGC1BQ86YN6 1023 aaKnown RBP20.9■□□□□ 0.94
PDCD6-204ENST00000506909 DUOX2Q9NRD8 1548 aa20.89■□□□□ 0.94
PDCD6-204ENST00000506909 FAM50AQ14320 339 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms