RNA–Protein interactions for RNA: ENST00000506820.1

AFP-203, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-203ENST00000506820 TMC2Q8TDI7 906 aa9.45□□□□□ -0.9
AFP-203ENST00000506820 PPP1R37O75864 691 aa9.4□□□□□ -0.9
AFP-203ENST00000506820 EMP3P54852 163 aa9.4□□□□□ -0.9
AFP-203ENST00000506820 ZSWIM6Q9HCJ5 1215 aa9.4□□□□□ -0.9
AFP-203ENST00000506820 TMEM92Q6UXU6 159 aa9.39□□□□□ -0.91
AFP-203ENST00000506820 C2orf72A6NCS6 295 aa9.37□□□□□ -0.91
AFP-203ENST00000506820 HOXB3P14651 431 aaPredicted RBP9.37□□□□□ -0.91
AFP-203ENST00000506820 NKX1-1Q15270 411 aaPredicted RBP9.37□□□□□ -0.91
AFP-203ENST00000506820 MARVELD3Q96A59 401 aa9.37□□□□□ -0.91
AFP-203ENST00000506820 RTN4Q9NQC3 1192 aaKnown RBP9.36□□□□□ -0.91
AFP-203ENST00000506820 HOXB1P14653 301 aaPredicted RBP9.35□□□□□ -0.91
AFP-203ENST00000506820 CDAN1Q8IWY9 1227 aa9.34□□□□□ -0.91
AFP-203ENST00000506820 KIF3CO14782 793 aa9.33□□□□□ -0.92
AFP-203ENST00000506820 BBXQ8WY36 941 aaPredicted RBP9.33□□□□□ -0.92
AFP-203ENST00000506820 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.33□□□□□ -0.92
AFP-203ENST00000506820 ERBB3P21860 1342 aa9.31□□□□□ -0.92
AFP-203ENST00000506820 FAM205CA6NFA0 338 aa9.31□□□□□ -0.92
AFP-203ENST00000506820 GTPBP6O43824 516 aaPredicted RBP9.31□□□□□ -0.92
AFP-203ENST00000506820 GPHNQ9NQX3 736 aaPredicted RBP9.31□□□□□ -0.92
AFP-203ENST00000506820 PDE4AP27815 886 aa9.29□□□□□ -0.92
AFP-203ENST00000506820 FOXK1P85037 733 aa9.28□□□□□ -0.92
AFP-203ENST00000506820 TBC1D12O60347 775 aa9.27□□□□□ -0.93
AFP-203ENST00000506820 SLC34A2O95436 690 aa9.27□□□□□ -0.93
AFP-203ENST00000506820 ARSIQ5FYB1 569 aa9.27□□□□□ -0.93
AFP-203ENST00000506820 GPR153Q6NV75 609 aa9.27□□□□□ -0.93
AFP-203ENST00000506820 HS3ST6Q96QI5 342 aa9.27□□□□□ -0.93
AFP-203ENST00000506820 PLPP6Q8IY26 295 aa9.25□□□□□ -0.93
AFP-203ENST00000506820 SPRYD3Q8NCJ5 442 aa9.25□□□□□ -0.93
AFP-203ENST00000506820 DSG2Q14126 1118 aa9.22□□□□□ -0.93
AFP-203ENST00000506820 VARS2Q5ST30 1063 aaKnown RBP9.22□□□□□ -0.93
AFP-203ENST00000506820 PCDHGA4Q9Y5G9 962 aa9.22□□□□□ -0.93
AFP-203ENST00000506820 CRISPLD2Q9H0B8 497 aa9.2□□□□□ -0.94
AFP-203ENST00000506820 ZNF316A6NFI3 1004 aaPredicted RBP9.19□□□□□ -0.94
AFP-203ENST00000506820 PPP1R15BQ5SWA1 713 aa9.19□□□□□ -0.94
AFP-203ENST00000506820 PTCD2Q8WV60 388 aaKnown RBP9.19□□□□□ -0.94
AFP-203ENST00000506820 DDX27Q96GQ7 796 aaKnown RBP9.19□□□□□ -0.94
AFP-203ENST00000506820 LARP6Q9BRS8 491 aaKnown RBP9.19□□□□□ -0.94
AFP-203ENST00000506820 PSDA5PKW4 1024 aaPredicted RBP9.18□□□□□ -0.94
AFP-203ENST00000506820 NUDT7P0C024 238 aa9.18□□□□□ -0.94
AFP-203ENST00000506820 KHSRPQ92945 711 aaKnown RBP eCLIP9.17□□□□□ -0.94
AFP-203ENST00000506820 MMRN1Q13201 1228 aa9.16□□□□□ -0.94
AFP-203ENST00000506820 ZNF687Q8N1G0 1237 aa9.16□□□□□ -0.94
AFP-203ENST00000506820 CFAP44Q96MT7 982 aa9.16□□□□□ -0.94
AFP-203ENST00000506820 PAXIP1Q6ZW49 1069 aaPredicted RBP9.15□□□□□ -0.94
AFP-203ENST00000506820 NCKAP5LQ9HCH0 1330 aa9.14□□□□□ -0.95
AFP-203ENST00000506820 POTEB3A0JP26 581 aa9.14□□□□□ -0.95
AFP-203ENST00000506820 POTEBQ6S5H4 581 aa9.14□□□□□ -0.95
AFP-203ENST00000506820 LHX6Q9UPM6 363 aa9.13□□□□□ -0.95
AFP-203ENST00000506820 UPF1Q92900 1129 aaKnown RBP eCLIP9.11□□□□□ -0.95
AFP-203ENST00000506820 PBX2P40425 430 aa9.1□□□□□ -0.95
AFP-203ENST00000506820 MAP3K9P80192 1104 aa9.1□□□□□ -0.95
AFP-203ENST00000506820 MFSD10Q14728 455 aa9.1□□□□□ -0.95
AFP-203ENST00000506820 OXER1Q8TDS5 423 aa9.09□□□□□ -0.95
AFP-203ENST00000506820 KCNH8Q96L42 1107 aa9.09□□□□□ -0.95
AFP-203ENST00000506820 PPP4R3BQ5MIZ7 849 aa9.08□□□□□ -0.96
AFP-203ENST00000506820 SPNS2Q8IVW8 549 aa9.08□□□□□ -0.96
AFP-203ENST00000506820 KRTAP3-3Q9BYR6 98 aa9.08□□□□□ -0.96
AFP-203ENST00000506820 KRTAP3-2Q9BYR7 98 aa9.08□□□□□ -0.96
AFP-203ENST00000506820 WDR70Q9NW82 654 aa9.08□□□□□ -0.96
AFP-203ENST00000506820 CADPS2Q86UW7 1296 aa9.06□□□□□ -0.96
AFP-203ENST00000506820 ANKRD13DQ6ZTN6 518 aa9.04□□□□□ -0.96
AFP-203ENST00000506820 KDM4FA0A1W2PPD8 638 aa9.03□□□□□ -0.96
AFP-203ENST00000506820 ARHGAP33O14559 1287 aa9.03□□□□□ -0.96
AFP-203ENST00000506820 EVI5O60447 810 aa9.03□□□□□ -0.96
AFP-203ENST00000506820 PTGER2P43116 358 aa9.03□□□□□ -0.96
AFP-203ENST00000506820 LSM11P83369 360 aaKnown RBP eCLIP9□□□□□ -0.97
AFP-203ENST00000506820 ZNF454Q8N9F8 522 aa9□□□□□ -0.97
AFP-203ENST00000506820 ANO8Q9HCE9 1232 aaPredicted RBP8.99□□□□□ -0.97
AFP-203ENST00000506820 STAC3Q96MF2 364 aa8.98□□□□□ -0.97
AFP-203ENST00000506820 CAMK2BQ13554 666 aa8.97□□□□□ -0.97
AFP-203ENST00000506820 JPH4Q96JJ6 628 aa8.97□□□□□ -0.97
AFP-203ENST00000506820 EMILIN3Q9NT22 766 aa8.97□□□□□ -0.97
AFP-203ENST00000506820 AXIN2Q9Y2T1 843 aa8.97□□□□□ -0.97
AFP-203ENST00000506820 E2F4Q16254 413 aa8.96□□□□□ -0.98
AFP-203ENST00000506820 MYT1LQ9UL68 1186 aa8.96□□□□□ -0.98
AFP-203ENST00000506820 PTPREP23469 700 aa8.94□□□□□ -0.98
AFP-203ENST00000506820 FOSBP53539 338 aa8.94□□□□□ -0.98
AFP-203ENST00000506820 ZDHHC16Q969W1 377 aa8.94□□□□□ -0.98
AFP-203ENST00000506820 KCNK17Q96T54 332 aa8.94□□□□□ -0.98
AFP-203ENST00000506820 TK2O00142 265 aa8.93□□□□□ -0.98
AFP-203ENST00000506820 DPYSL4O14531 572 aa8.93□□□□□ -0.98
AFP-203ENST00000506820 BCL2L12Q9HB09 334 aa8.93□□□□□ -0.98
AFP-203ENST00000506820 FBXW7Q969H0 707 aa8.92□□□□□ -0.98
AFP-203ENST00000506820 RNF166Q96A37 237 aaPredicted RBP8.92□□□□□ -0.98
AFP-203ENST00000506820 SPDYE16A6NNV3 312 aaPredicted RBP8.91□□□□□ -0.98
AFP-203ENST00000506820 PSEN2P49810 448 aa8.91□□□□□ -0.98
AFP-203ENST00000506820 ADGRD1Q6QNK2 874 aa8.91□□□□□ -0.98
AFP-203ENST00000506820 PHF14O94880 888 aa8.9□□□□□ -0.98
AFP-203ENST00000506820 TYW1BQ6NUM6 668 aa8.9□□□□□ -0.98
AFP-203ENST00000506820 POTEEQ6S8J3 1075 aa8.9□□□□□ -0.98
AFP-203ENST00000506820 EPAS1Q99814 870 aa8.9□□□□□ -0.98
AFP-203ENST00000506820 DMRTA1Q5VZB9 504 aa8.87□□□□□ -0.99
AFP-203ENST00000506820 TSHZ2Q9NRE2 1034 aa8.87□□□□□ -0.99
AFP-203ENST00000506820 PCDHGA10Q9Y5H3 936 aa8.87□□□□□ -0.99
AFP-203ENST00000506820 PDIA6Q15084 440 aa8.85□□□□□ -0.99
AFP-203ENST00000506820 ADAM33Q9BZ11 813 aa8.85□□□□□ -0.99
AFP-203ENST00000506820 ARIH1Q9Y4X5 557 aaPredicted RBP8.85□□□□□ -0.99
AFP-203ENST00000506820 PLCB2Q00722 1185 aa8.84□□□□□ -0.99
AFP-203ENST00000506820 SLC4A5Q9BY07 1137 aa8.84□□□□□ -0.99
AFP-203ENST00000506820 DDX12PQ92771 950 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms