RNA–Protein interactions for RNA: ENST00000506727.1

PKD2-204, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

TSL 4

Gene PKD2, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-204ENST00000506727 NCOA1Q15788 1441 aa15.33■□□□□ 0.04
PKD2-204ENST00000506727 KIAA0556O60303 1618 aa15.32■□□□□ 0.04
PKD2-204ENST00000506727 NCBP3Q53F19 620 aaKnown RBP15.31■□□□□ 0.04
PKD2-204ENST00000506727 FHOD3Q2V2M9 1422 aa15.31■□□□□ 0.04
PKD2-204ENST00000506727 NPM3O75607 178 aaKnown RBP15.3■□□□□ 0.04
PKD2-204ENST00000506727 RICTORQ6R327 1708 aa15.3■□□□□ 0.04
PKD2-204ENST00000506727 ABCA8O94911 1581 aa15.29■□□□□ 0.04
PKD2-204ENST00000506727 DENND4BO75064 1496 aaPredicted RBP15.29■□□□□ 0.04
PKD2-204ENST00000506727 PIP4K2BP78356 416 aa15.29■□□□□ 0.04
PKD2-204ENST00000506727 CARMIL1Q5VZK9 1371 aa15.28■□□□□ 0.04
PKD2-204ENST00000506727 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
PKD2-204ENST00000506727 ZMYM4Q5VZL5 1548 aa15.27■□□□□ 0.03
PKD2-204ENST00000506727 ZFYVE16Q7Z3T8 1539 aa15.27■□□□□ 0.03
PKD2-204ENST00000506727 EFCAB5A4FU69 1503 aa15.26■□□□□ 0.03
PKD2-204ENST00000506727 TOM1O60784 492 aa15.25■□□□□ 0.03
PKD2-204ENST00000506727 MAGI2Q86UL8 1455 aa15.25■□□□□ 0.03
PKD2-204ENST00000506727 KIF27Q86VH2 1401 aa15.25■□□□□ 0.03
PKD2-204ENST00000506727 ATP10BO94823 1461 aa15.17■□□□□ 0.02
PKD2-204ENST00000506727 POTEAQ6S8J7 498 aa15.17■□□□□ 0.02
PKD2-204ENST00000506727 CAMSAP1Q5T5Y3 1602 aa15.17■□□□□ 0.02
PKD2-204ENST00000506727 TRAPPC8Q9Y2L5 1435 aa15.17■□□□□ 0.02
PKD2-204ENST00000506727 NCKAP5LQ9HCH0 1330 aa15.17■□□□□ 0.02
PKD2-204ENST00000506727 ATP10AO60312 1499 aa15.15■□□□□ 0.02
PKD2-204ENST00000506727 HECW1Q76N89 1606 aa15.13■□□□□ 0.01
PKD2-204ENST00000506727 C3P01024 1663 aa15.12■□□□□ 0.01
PKD2-204ENST00000506727 C9orf84Q5VXU9 1444 aa15.12■□□□□ 0.01
PKD2-204ENST00000506727 PKD2Q13563 968 aa15.11■□□□□ 0.01
PKD2-204ENST00000506727 ARID3CA6NKF2 412 aa15.1■□□□□ 0.01
PKD2-204ENST00000506727 ALKQ9UM73 1620 aa15.1■□□□□ 0.01
PKD2-204ENST00000506727 PTPRKQ15262 1439 aa15.09■□□□□ 0.01
PKD2-204ENST00000506727 CFAP74Q9C0B2 1584 aa15.08■□□□□ 0
PKD2-204ENST00000506727 UPF1Q92900 1129 aaKnown RBP eCLIP15.08■□□□□ 0
PKD2-204ENST00000506727 GOLGA3Q08378 1498 aa15.08■□□□□ 0
PKD2-204ENST00000506727 SETD1AO15047 1707 aaKnown RBP15.07■□□□□ 0
PKD2-204ENST00000506727 CPS1P31327 1500 aa15.07■□□□□ 0
PKD2-204ENST00000506727 PLA2R1Q13018 1463 aa15.06■□□□□ 0
PKD2-204ENST00000506727 TCOF1Q13428 1488 aaKnown RBP15.06■□□□□ 0
PKD2-204ENST00000506727 RAPGEF2Q9Y4G8 1499 aa15.03■□□□□ -0
PKD2-204ENST00000506727 NPATQ14207 1427 aa15□□□□□ -0.01
PKD2-204ENST00000506727 SHANK2Q9UPX8 1470 aa14.99□□□□□ -0.01
PKD2-204ENST00000506727 SCAPERQ9BY12 1400 aa14.98□□□□□ -0.01
PKD2-204ENST00000506727 ESF1Q9H501 851 aaKnown RBP14.97□□□□□ -0.01
PKD2-204ENST00000506727 FAM9AQ8IZU1 332 aaPredicted RBP14.95□□□□□ -0.02
PKD2-204ENST00000506727 SLC4A1APQ9BWU0 796 aaKnown RBP14.95□□□□□ -0.02
PKD2-204ENST00000506727 AGLP35573 1532 aa14.95□□□□□ -0.02
PKD2-204ENST00000506727 CNTLNQ9NXG0 1405 aa14.94□□□□□ -0.02
PKD2-204ENST00000506727 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
PKD2-204ENST00000506727 REREQ9P2R6 1566 aa14.93□□□□□ -0.02
PKD2-204ENST00000506727 ZNF142P52746 1687 aaPredicted RBP14.93□□□□□ -0.02
PKD2-204ENST00000506727 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.92□□□□□ -0.02
PKD2-204ENST00000506727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
PKD2-204ENST00000506727 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
PKD2-204ENST00000506727 CTTNBP2Q8WZ74 1663 aa14.88□□□□□ -0.03
PKD2-204ENST00000506727 CEP170BQ9Y4F5 1589 aaPredicted RBP14.88□□□□□ -0.03
PKD2-204ENST00000506727 SUPT6HQ7KZ85 1726 aaKnown RBP14.88□□□□□ -0.03
PKD2-204ENST00000506727 HOXD11P31277 338 aaPredicted RBP14.87□□□□□ -0.03
PKD2-204ENST00000506727 VWDEQ8N2E2 1590 aa14.86□□□□□ -0.03
PKD2-204ENST00000506727 DIP2CQ9Y2E4 1556 aa14.86□□□□□ -0.03
PKD2-204ENST00000506727 MYO3AQ8NEV4 1616 aa14.86□□□□□ -0.03
PKD2-204ENST00000506727 PLEKHD1A6NEE1 506 aa14.86□□□□□ -0.03
PKD2-204ENST00000506727 ZMYM3Q14202 1370 aa14.85□□□□□ -0.03
PKD2-204ENST00000506727 MROH2AA6NES4 1674 aa14.85□□□□□ -0.03
PKD2-204ENST00000506727 POTEDQ86YR6 584 aa14.85□□□□□ -0.03
PKD2-204ENST00000506727 RAPGEF6Q8TEU7 1601 aa14.84□□□□□ -0.03
PKD2-204ENST00000506727 PLCH2O75038 1416 aa14.83□□□□□ -0.03
PKD2-204ENST00000506727 ZNF518AQ6AHZ1 1483 aa14.83□□□□□ -0.03
PKD2-204ENST00000506727 EHMT2Q96KQ7 1210 aa14.83□□□□□ -0.04
PKD2-204ENST00000506727 KDM5CP41229 1560 aa14.82□□□□□ -0.04
PKD2-204ENST00000506727 NEURL4Q96JN8 1562 aa14.82□□□□□ -0.04
PKD2-204ENST00000506727 RNF17Q9BXT8 1623 aaKnown RBP14.82□□□□□ -0.04
PKD2-204ENST00000506727 NUP153P49790 1475 aaKnown RBP14.82□□□□□ -0.04
PKD2-204ENST00000506727 AFAP1Q8N556 730 aa14.8□□□□□ -0.04
PKD2-204ENST00000506727 LRRC7Q96NW7 1537 aa14.8□□□□□ -0.04
PKD2-204ENST00000506727 IFFO2Q5TF58 517 aa14.79□□□□□ -0.04
PKD2-204ENST00000506727 P3H3Q8IVL6 736 aa14.79□□□□□ -0.04
PKD2-204ENST00000506727 POLR1AO95602 1720 aaPredicted RBP14.78□□□□□ -0.04
PKD2-204ENST00000506727 ABCA6Q8N139 1617 aa14.77□□□□□ -0.04
PKD2-204ENST00000506727 EFCAB2Q5VUJ9 269 aa14.77□□□□□ -0.05
PKD2-204ENST00000506727 TRIM52Q96A61 297 aa14.77□□□□□ -0.05
PKD2-204ENST00000506727 DNMT1P26358 1616 aaKnown RBP14.76□□□□□ -0.05
PKD2-204ENST00000506727 A2ML1A8K2U0 1454 aa14.76□□□□□ -0.05
PKD2-204ENST00000506727 MLH3Q9UHC1 1453 aa14.76□□□□□ -0.05
PKD2-204ENST00000506727 FAM135BQ49AJ0 1406 aa14.75□□□□□ -0.05
PKD2-204ENST00000506727 MYT1LQ9UL68 1186 aa14.74□□□□□ -0.05
PKD2-204ENST00000506727 SYNMO15061 1565 aa14.72□□□□□ -0.05
PKD2-204ENST00000506727 STRCP1A6NGW2 1772 aa14.71□□□□□ -0.05
PKD2-204ENST00000506727 ZRANB1Q9UGI0 708 aa14.71□□□□□ -0.05
PKD2-204ENST00000506727 MED14O60244 1454 aa14.7□□□□□ -0.06
PKD2-204ENST00000506727 ZNF772Q68DY9 489 aaPredicted RBP14.7□□□□□ -0.06
PKD2-204ENST00000506727 CDK12Q9NYV4 1490 aaPredicted RBP14.69□□□□□ -0.06
PKD2-204ENST00000506727 ANKLE2Q86XL3 938 aa14.69□□□□□ -0.06
PKD2-204ENST00000506727 SETBP1Q9Y6X0 1596 aa14.68□□□□□ -0.06
PKD2-204ENST00000506727 NPHP4O75161 1426 aaPredicted RBP14.67□□□□□ -0.06
PKD2-204ENST00000506727 RXRBP28702 533 aa14.67□□□□□ -0.06
PKD2-204ENST00000506727 CLTCQ00610 1675 aaKnown RBP14.66□□□□□ -0.06
PKD2-204ENST00000506727 RBM33Q96EV2 1170 aaKnown RBP14.66□□□□□ -0.06
PKD2-204ENST00000506727 SAMD9Q5K651 1589 aa14.65□□□□□ -0.06
PKD2-204ENST00000506727 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.65□□□□□ -0.06
PKD2-204ENST00000506727 DEPDC5O75140 1603 aa14.64□□□□□ -0.07
PKD2-204ENST00000506727 MYO5CQ9NQX4 1742 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms