RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 DENND4BO75064 1496 aaPredicted RBP23.3■■□□□ 1.32
DSP-203ENST00000506617 ADGRL1O94910 1474 aa23.3■■□□□ 1.32
DSP-203ENST00000506617 RAPGEF3O95398 923 aa23.27■■□□□ 1.32
DSP-203ENST00000506617 EFCAB2Q5VUJ9 269 aa23.26■■□□□ 1.31
DSP-203ENST00000506617 MAP3K1Q13233 1512 aa23.25■■□□□ 1.31
DSP-203ENST00000506617 SUPT6HQ7KZ85 1726 aaKnown RBP23.25■■□□□ 1.31
DSP-203ENST00000506617 SCAPERQ9BY12 1400 aa23.24■■□□□ 1.31
DSP-203ENST00000506617 GPATCH8Q9UKJ3 1502 aaKnown RBP23.23■■□□□ 1.31
DSP-203ENST00000506617 POGZQ7Z3K3 1410 aa23.22■■□□□ 1.31
DSP-203ENST00000506617 ZMYM4Q5VZL5 1548 aa23.22■■□□□ 1.31
DSP-203ENST00000506617 ITSN2Q9NZM3 1697 aa23.22■■□□□ 1.31
DSP-203ENST00000506617 ABCC1P33527 1531 aa23.21■■□□□ 1.31
DSP-203ENST00000506617 LRRC9Q6ZRR7 1453 aa23.2■■□□□ 1.3
DSP-203ENST00000506617 CCNB3Q8WWL7 1395 aa23.2■■□□□ 1.3
DSP-203ENST00000506617 SAMD9LQ8IVG5 1584 aa23.18■■□□□ 1.3
DSP-203ENST00000506617 ARHGEF40Q8TER5 1519 aa23.18■■□□□ 1.3
DSP-203ENST00000506617 NCOA2Q15596 1464 aa23.17■■□□□ 1.3
DSP-203ENST00000506617 APLP2Q06481 763 aa23.15■■□□□ 1.3
DSP-203ENST00000506617 KDM5CP41229 1560 aa23.14■■□□□ 1.3
DSP-203ENST00000506617 ARHGEF12Q9NZN5 1544 aa23.14■■□□□ 1.3
DSP-203ENST00000506617 ZNF518AQ6AHZ1 1483 aa23.14■■□□□ 1.29
DSP-203ENST00000506617 ZFYVE16Q7Z3T8 1539 aa23.13■■□□□ 1.29
DSP-203ENST00000506617 SYCP2Q9BX26 1530 aa23.13■■□□□ 1.29
DSP-203ENST00000506617 KANK4Q5T7N3 995 aaPredicted RBP23.11■■□□□ 1.29
DSP-203ENST00000506617 CFDP1Q9UEE9 299 aaPredicted RBP23.11■■□□□ 1.29
DSP-203ENST00000506617 ZNF777Q9ULD5 760 aaPredicted RBP23.11■■□□□ 1.29
DSP-203ENST00000506617 MAGI2Q86UL8 1455 aa23.11■■□□□ 1.29
DSP-203ENST00000506617 YEATS2Q9ULM3 1422 aa23.1■■□□□ 1.29
DSP-203ENST00000506617 HECW2Q9P2P5 1572 aa23.1■■□□□ 1.29
DSP-203ENST00000506617 TRAPPC8Q9Y2L5 1435 aa23.09■■□□□ 1.29
DSP-203ENST00000506617 KDM4FA0A1W2PPD8 638 aa23.08■■□□□ 1.29
DSP-203ENST00000506617 PLEKHH2Q8IVE3 1493 aa23.06■■□□□ 1.28
DSP-203ENST00000506617 AFAP1Q8N556 730 aa23.06■■□□□ 1.28
DSP-203ENST00000506617 SIGLEC1Q9BZZ2 1709 aa23.05■■□□□ 1.28
DSP-203ENST00000506617 KIAA1107Q9UPP5 1409 aa23.03■■□□□ 1.28
DSP-203ENST00000506617 ABCA6Q8N139 1617 aa23.02■■□□□ 1.28
DSP-203ENST00000506617 AEBP2Q6ZN18 517 aaPredicted RBP23.02■■□□□ 1.28
DSP-203ENST00000506617 DIP2CQ9Y2E4 1556 aa23.01■■□□□ 1.27
DSP-203ENST00000506617 KIDINS220Q9ULH0 1771 aa23.01■■□□□ 1.27
DSP-203ENST00000506617 CAMSAP2Q08AD1 1489 aa23.01■■□□□ 1.27
DSP-203ENST00000506617 MLH3Q9UHC1 1453 aa23.01■■□□□ 1.27
DSP-203ENST00000506617 ZNF644Q9H582 1327 aaPredicted RBP23.01■■□□□ 1.27
DSP-203ENST00000506617 BCORL1Q5H9F3 1711 aa23■■□□□ 1.27
DSP-203ENST00000506617 HNRNPMP52272 730 aaKnown RBP eCLIP23■■□□□ 1.27
DSP-203ENST00000506617 MYOM3Q5VTT5 1437 aa22.98■■□□□ 1.27
DSP-203ENST00000506617 C9orf84Q5VXU9 1444 aa22.98■■□□□ 1.27
DSP-203ENST00000506617 ATP10AO60312 1499 aa22.98■■□□□ 1.27
DSP-203ENST00000506617 MYT1LQ9UL68 1186 aa22.97■■□□□ 1.27
DSP-203ENST00000506617 MBD5Q9P267 1494 aa22.97■■□□□ 1.27
DSP-203ENST00000506617 INO80Q9ULG1 1556 aaPredicted RBP22.97■■□□□ 1.27
DSP-203ENST00000506617 ADAMTSL3P82987 1691 aa22.97■■□□□ 1.27
DSP-203ENST00000506617 ARID4BQ4LE39 1312 aaPredicted RBP22.95■■□□□ 1.26
DSP-203ENST00000506617 ATP7AQ04656 1500 aa22.94■■□□□ 1.26
DSP-203ENST00000506617 REREQ9P2R6 1566 aa22.93■■□□□ 1.26
DSP-203ENST00000506617 MIA2Q96PC5 1412 aa22.92■■□□□ 1.26
DSP-203ENST00000506617 MADDQ8WXG6 1647 aa22.92■■□□□ 1.26
DSP-203ENST00000506617 SPAG9O60271 1321 aaKnown RBP22.91■■□□□ 1.26
DSP-203ENST00000506617 ARHGEF5Q12774 1597 aa22.91■■□□□ 1.26
DSP-203ENST00000506617 CCDC141Q6ZP82 1450 aa22.91■■□□□ 1.26
DSP-203ENST00000506617 PTPN23Q9H3S7 1636 aa22.88■■□□□ 1.25
DSP-203ENST00000506617 RIMS1Q86UR5 1692 aaKnown RBP22.87■■□□□ 1.25
DSP-203ENST00000506617 FER1L4A9Z1Z3 1794 aa22.86■■□□□ 1.25
DSP-203ENST00000506617 ADGBQ8N7X0 1667 aa22.84■■□□□ 1.25
DSP-203ENST00000506617 FGD6Q6ZV73 1430 aa22.84■■□□□ 1.25
DSP-203ENST00000506617 AGLP35573 1532 aa22.83■■□□□ 1.25
DSP-203ENST00000506617 PLXNC1O60486 1568 aa22.82■■□□□ 1.24
DSP-203ENST00000506617 MLECQ14165 292 aa22.82■■□□□ 1.24
DSP-203ENST00000506617 RTEL1-TNFRSF6BF6WH68 1400 aa22.82■■□□□ 1.24
DSP-203ENST00000506617 CROCC2H7BZ55 1655 aa22.81■■□□□ 1.24
DSP-203ENST00000506617 PTPRMP28827 1452 aa22.8■■□□□ 1.24
DSP-203ENST00000506617 TCOF1Q13428 1488 aaKnown RBP22.8■■□□□ 1.24
DSP-203ENST00000506617 RSPH4AQ5TD94 716 aa22.8■■□□□ 1.24
DSP-203ENST00000506617 MAST1Q9Y2H9 1570 aa22.8■■□□□ 1.24
DSP-203ENST00000506617 A2MP01023 1474 aa22.79■■□□□ 1.24
DSP-203ENST00000506617 DNMT1P26358 1616 aaKnown RBP22.76■■□□□ 1.23
DSP-203ENST00000506617 TSPY4P0CV99 314 aa22.73■■□□□ 1.23
DSP-203ENST00000506617 TSPY10P0CW01 314 aa22.73■■□□□ 1.23
DSP-203ENST00000506617 PPARGC1BQ86YN6 1023 aaKnown RBP22.73■■□□□ 1.23
DSP-203ENST00000506617 SHANK2Q9UPX8 1470 aa22.72■■□□□ 1.23
DSP-203ENST00000506617 ABCC5O15440 1437 aa22.71■■□□□ 1.23
DSP-203ENST00000506617 DAPK1P53355 1430 aa22.71■■□□□ 1.23
DSP-203ENST00000506617 DHX29Q7Z478 1369 aaKnown RBP22.69■■□□□ 1.22
DSP-203ENST00000506617 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.65■■□□□ 1.22
DSP-203ENST00000506617 C3P01024 1663 aa22.65■■□□□ 1.22
DSP-203ENST00000506617 FAM50AQ14320 339 aaKnown RBP22.64■■□□□ 1.21
DSP-203ENST00000506617 MROH2AA6NES4 1674 aa22.63■■□□□ 1.21
DSP-203ENST00000506617 CLTCQ00610 1675 aaKnown RBP22.63■■□□□ 1.21
DSP-203ENST00000506617 PLPPR3Q6T4P5 718 aa22.63■■□□□ 1.21
DSP-203ENST00000506617 EIF2AK4Q9P2K8 1649 aaKnown RBP22.62■■□□□ 1.21
DSP-203ENST00000506617 RRBP1Q9P2E9 1410 aaKnown RBP22.62■■□□□ 1.21
DSP-203ENST00000506617 CNTLNQ9NXG0 1405 aa22.6■■□□□ 1.21
DSP-203ENST00000506617 GGT6Q6P531 493 aa22.6■■□□□ 1.21
DSP-203ENST00000506617 DUOX2Q9NRD8 1548 aa22.6■■□□□ 1.21
DSP-203ENST00000506617 ESF1Q9H501 851 aaKnown RBP22.59■■□□□ 1.21
DSP-203ENST00000506617 RNF17Q9BXT8 1623 aaKnown RBP22.58■■□□□ 1.21
DSP-203ENST00000506617 KIF3BO15066 747 aa22.58■■□□□ 1.21
DSP-203ENST00000506617 KIF15Q9NS87 1388 aa22.58■■□□□ 1.21
DSP-203ENST00000506617 CEBPAP49715 358 aaPredicted RBP22.57■■□□□ 1.2
DSP-203ENST00000506617 ADGRL2O95490 1459 aa22.56■■□□□ 1.2
DSP-203ENST00000506617 CHIC2Q9UKJ5 165 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms