RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 MAP3K1Q13233 1512 aa28.9■■■□□ 2.22
PDLIM7-216ENST00000506537 RICTORQ6R327 1708 aa28.89■■■□□ 2.21
PDLIM7-216ENST00000506537 RAPGEF3O95398 923 aa28.88■■■□□ 2.21
PDLIM7-216ENST00000506537 ADGRL1O94910 1474 aa28.88■■■□□ 2.21
PDLIM7-216ENST00000506537 GPATCH8Q9UKJ3 1502 aaKnown RBP28.88■■■□□ 2.21
PDLIM7-216ENST00000506537 DENND4BO75064 1496 aaPredicted RBP28.87■■■□□ 2.21
PDLIM7-216ENST00000506537 EFCAB2Q5VUJ9 269 aa28.87■■■□□ 2.21
PDLIM7-216ENST00000506537 LRRC9Q6ZRR7 1453 aa28.86■■■□□ 2.21
PDLIM7-216ENST00000506537 SUPT6HQ7KZ85 1726 aaKnown RBP28.83■■■□□ 2.21
PDLIM7-216ENST00000506537 SCAPERQ9BY12 1400 aa28.83■■■□□ 2.21
PDLIM7-216ENST00000506537 NCOA2Q15596 1464 aa28.81■■■□□ 2.2
PDLIM7-216ENST00000506537 POGZQ7Z3K3 1410 aa28.81■■■□□ 2.2
PDLIM7-216ENST00000506537 CCNB3Q8WWL7 1395 aa28.81■■■□□ 2.2
PDLIM7-216ENST00000506537 KANK4Q5T7N3 995 aaPredicted RBP28.8■■■□□ 2.2
PDLIM7-216ENST00000506537 ABCC1P33527 1531 aa28.79■■■□□ 2.2
PDLIM7-216ENST00000506537 SAMD9LQ8IVG5 1584 aa28.78■■■□□ 2.2
PDLIM7-216ENST00000506537 ZMYM4Q5VZL5 1548 aa28.78■■■□□ 2.2
PDLIM7-216ENST00000506537 ITSN2Q9NZM3 1697 aa28.76■■■□□ 2.19
PDLIM7-216ENST00000506537 ARHGEF12Q9NZN5 1544 aa28.75■■■□□ 2.19
PDLIM7-216ENST00000506537 ARHGEF40Q8TER5 1519 aa28.72■■■□□ 2.19
PDLIM7-216ENST00000506537 KDM5CP41229 1560 aa28.71■■■□□ 2.19
PDLIM7-216ENST00000506537 CFDP1Q9UEE9 299 aaPredicted RBP28.7■■■□□ 2.18
PDLIM7-216ENST00000506537 ZNF518AQ6AHZ1 1483 aa28.7■■■□□ 2.18
PDLIM7-216ENST00000506537 SYCP2Q9BX26 1530 aa28.69■■■□□ 2.18
PDLIM7-216ENST00000506537 APLP2Q06481 763 aa28.68■■■□□ 2.18
PDLIM7-216ENST00000506537 ZNF777Q9ULD5 760 aaPredicted RBP28.68■■■□□ 2.18
PDLIM7-216ENST00000506537 TRAPPC8Q9Y2L5 1435 aa28.68■■■□□ 2.18
PDLIM7-216ENST00000506537 ZFYVE16Q7Z3T8 1539 aa28.66■■■□□ 2.18
PDLIM7-216ENST00000506537 YEATS2Q9ULM3 1422 aa28.66■■■□□ 2.18
PDLIM7-216ENST00000506537 MAGI2Q86UL8 1455 aa28.65■■■□□ 2.18
PDLIM7-216ENST00000506537 AFAP1Q8N556 730 aa28.64■■■□□ 2.18
PDLIM7-216ENST00000506537 KIAA1107Q9UPP5 1409 aa28.62■■■□□ 2.17
PDLIM7-216ENST00000506537 PLEKHH2Q8IVE3 1493 aa28.62■■■□□ 2.17
PDLIM7-216ENST00000506537 ZNF644Q9H582 1327 aaPredicted RBP28.62■■■□□ 2.17
PDLIM7-216ENST00000506537 HECW2Q9P2P5 1572 aa28.62■■■□□ 2.17
PDLIM7-216ENST00000506537 KDM4FA0A1W2PPD8 638 aa28.6■■■□□ 2.17
PDLIM7-216ENST00000506537 CAMSAP2Q08AD1 1489 aa28.58■■■□□ 2.17
PDLIM7-216ENST00000506537 SIGLEC1Q9BZZ2 1709 aa28.57■■■□□ 2.16
PDLIM7-216ENST00000506537 HNRNPMP52272 730 aaKnown RBP eCLIP28.57■■■□□ 2.16
PDLIM7-216ENST00000506537 MYOM3Q5VTT5 1437 aa28.57■■■□□ 2.16
PDLIM7-216ENST00000506537 MBD5Q9P267 1494 aa28.56■■■□□ 2.16
PDLIM7-216ENST00000506537 MLH3Q9UHC1 1453 aa28.56■■■□□ 2.16
PDLIM7-216ENST00000506537 ABCA6Q8N139 1617 aa28.54■■■□□ 2.16
PDLIM7-216ENST00000506537 DIP2CQ9Y2E4 1556 aa28.54■■■□□ 2.16
PDLIM7-216ENST00000506537 KIDINS220Q9ULH0 1771 aa28.53■■■□□ 2.16
PDLIM7-216ENST00000506537 MIA2Q96PC5 1412 aa28.5■■■□□ 2.15
PDLIM7-216ENST00000506537 INO80Q9ULG1 1556 aaPredicted RBP28.5■■■□□ 2.15
PDLIM7-216ENST00000506537 ATP10AO60312 1499 aa28.49■■■□□ 2.15
PDLIM7-216ENST00000506537 C9orf84Q5VXU9 1444 aa28.48■■■□□ 2.15
PDLIM7-216ENST00000506537 ILDR1Q86SU0 546 aaPredicted RBP28.46■■■□□ 2.15
PDLIM7-216ENST00000506537 ATP7AQ04656 1500 aa28.46■■■□□ 2.15
PDLIM7-216ENST00000506537 BCORL1Q5H9F3 1711 aa28.46■■■□□ 2.15
PDLIM7-216ENST00000506537 ARHGEF5Q12774 1597 aa28.45■■■□□ 2.14
PDLIM7-216ENST00000506537 CCDC141Q6ZP82 1450 aa28.44■■■□□ 2.14
PDLIM7-216ENST00000506537 SPAG9O60271 1321 aaKnown RBP28.43■■■□□ 2.14
PDLIM7-216ENST00000506537 REREQ9P2R6 1566 aa28.43■■■□□ 2.14
PDLIM7-216ENST00000506537 MYT1LQ9UL68 1186 aa28.43■■■□□ 2.14
PDLIM7-216ENST00000506537 ADAMTSL3P82987 1691 aa28.42■■■□□ 2.14
PDLIM7-216ENST00000506537 PTPN23Q9H3S7 1636 aa28.42■■■□□ 2.14
PDLIM7-216ENST00000506537 FGD6Q6ZV73 1430 aa28.42■■■□□ 2.14
PDLIM7-216ENST00000506537 ARID4BQ4LE39 1312 aaPredicted RBP28.42■■■□□ 2.14
PDLIM7-216ENST00000506537 TCOF1Q13428 1488 aaKnown RBP28.37■■■□□ 2.13
PDLIM7-216ENST00000506537 MADDQ8WXG6 1647 aa28.35■■■□□ 2.13
PDLIM7-216ENST00000506537 RTEL1-TNFRSF6BF6WH68 1400 aa28.35■■■□□ 2.13
PDLIM7-216ENST00000506537 PPARGC1BQ86YN6 1023 aaKnown RBP28.33■■■□□ 2.13
PDLIM7-216ENST00000506537 AGLP35573 1532 aa28.33■■■□□ 2.13
PDLIM7-216ENST00000506537 PLXNC1O60486 1568 aa28.33■■■□□ 2.12
PDLIM7-216ENST00000506537 RSPH4AQ5TD94 716 aa28.32■■■□□ 2.12
PDLIM7-216ENST00000506537 ADGBQ8N7X0 1667 aa28.3■■■□□ 2.12
PDLIM7-216ENST00000506537 MAST1Q9Y2H9 1570 aa28.3■■■□□ 2.12
PDLIM7-216ENST00000506537 CROCC2H7BZ55 1655 aa28.29■■■□□ 2.12
PDLIM7-216ENST00000506537 A2MP01023 1474 aa28.27■■■□□ 2.12
PDLIM7-216ENST00000506537 MLECQ14165 292 aa28.27■■■□□ 2.12
PDLIM7-216ENST00000506537 DNMT1P26358 1616 aaKnown RBP28.27■■■□□ 2.12
PDLIM7-216ENST00000506537 ABCC5O15440 1437 aa28.26■■■□□ 2.11
PDLIM7-216ENST00000506537 RIMS1Q86UR5 1692 aaKnown RBP28.26■■■□□ 2.11
PDLIM7-216ENST00000506537 FER1L4A9Z1Z3 1794 aa28.24■■■□□ 2.11
PDLIM7-216ENST00000506537 PTPRMP28827 1452 aa28.23■■■□□ 2.11
PDLIM7-216ENST00000506537 DAPK1P53355 1430 aa28.23■■■□□ 2.11
PDLIM7-216ENST00000506537 SHANK2Q9UPX8 1470 aa28.22■■■□□ 2.11
PDLIM7-216ENST00000506537 TSPY4P0CV99 314 aa28.22■■■□□ 2.11
PDLIM7-216ENST00000506537 TSPY10P0CW01 314 aa28.22■■■□□ 2.11
PDLIM7-216ENST00000506537 DHX29Q7Z478 1369 aaKnown RBP28.17■■■□□ 2.1
PDLIM7-216ENST00000506537 FAM50AQ14320 339 aaKnown RBP28.15■■■□□ 2.1
PDLIM7-216ENST00000506537 KIF15Q9NS87 1388 aa28.06■■■□□ 2.08
PDLIM7-216ENST00000506537 PTPRKQ15262 1439 aa28.06■■■□□ 2.08
PDLIM7-216ENST00000506537 DUOX2Q9NRD8 1548 aa28.06■■■□□ 2.08
PDLIM7-216ENST00000506537 ADGRL2O95490 1459 aa28.05■■■□□ 2.08
PDLIM7-216ENST00000506537 RRBP1Q9P2E9 1410 aaKnown RBP28.05■■■□□ 2.08
PDLIM7-216ENST00000506537 CHIC2Q9UKJ5 165 aa28.05■■■□□ 2.08
PDLIM7-216ENST00000506537 EIF2AK4Q9P2K8 1649 aaKnown RBP28.04■■■□□ 2.08
PDLIM7-216ENST00000506537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.04■■■□□ 2.082e-6■■■■□ 23.1
PDLIM7-216ENST00000506537 KIF3BO15066 747 aa28.02■■■□□ 2.08
PDLIM7-216ENST00000506537 GGT6Q6P531 493 aa28.02■■■□□ 2.08
PDLIM7-216ENST00000506537 RNF17Q9BXT8 1623 aaKnown RBP28.02■■■□□ 2.08
PDLIM7-216ENST00000506537 NCOA1Q15788 1441 aa28.01■■■□□ 2.08
PDLIM7-216ENST00000506537 C3P01024 1663 aa28.01■■■□□ 2.07
PDLIM7-216ENST00000506537 CLTCQ00610 1675 aaKnown RBP28.01■■■□□ 2.07
PDLIM7-216ENST00000506537 RRP7BPQ9NSQ0 103 aa28.01■■■□□ 2.07
PDLIM7-216ENST00000506537 CNTLNQ9NXG0 1405 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms