RNA–Protein interactions for RNA: ENST00000506510.6

PDE4D-215, Transcript of phosphodiesterase 4D, humanhuman

TSL 4

Gene PDE4D, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-215ENST00000506510 TMC2Q8TDI7 906 aa12.63□□□□□ -0.39
PDE4D-215ENST00000506510 KIF3CO14782 793 aa12.62□□□□□ -0.39
PDE4D-215ENST00000506510 CADPS2Q86UW7 1296 aa12.61□□□□□ -0.39
PDE4D-215ENST00000506510 NCKAP5LQ9HCH0 1330 aa12.58□□□□□ -0.4
PDE4D-215ENST00000506510 PLCB2Q00722 1185 aa12.57□□□□□ -0.4
PDE4D-215ENST00000506510 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
PDE4D-215ENST00000506510 CRISPLD2Q9H0B8 497 aa12.56□□□□□ -0.4
PDE4D-215ENST00000506510 SNPHO15079 494 aa12.55□□□□□ -0.4
PDE4D-215ENST00000506510 FAM163AQ96GL9 167 aaPredicted RBP12.55□□□□□ -0.4
PDE4D-215ENST00000506510 HOXB3P14651 431 aaPredicted RBP12.53□□□□□ -0.4
PDE4D-215ENST00000506510 PDE4AP27815 886 aa12.52□□□□□ -0.41
PDE4D-215ENST00000506510 DSG2Q14126 1118 aa12.52□□□□□ -0.41
PDE4D-215ENST00000506510 FOXK1P85037 733 aa12.51□□□□□ -0.41
PDE4D-215ENST00000506510 LCE2DQ5TA82 110 aaPredicted RBP12.51□□□□□ -0.41
PDE4D-215ENST00000506510 DOK7Q18PE1 504 aa12.5□□□□□ -0.41
PDE4D-215ENST00000506510 LARP6Q9BRS8 491 aaKnown RBP12.5□□□□□ -0.41
PDE4D-215ENST00000506510 ST18O60284 1047 aa12.49□□□□□ -0.41
PDE4D-215ENST00000506510 PLPP6Q8IY26 295 aa12.49□□□□□ -0.41
PDE4D-215ENST00000506510 TSHZ2Q9NRE2 1034 aa12.49□□□□□ -0.41
PDE4D-215ENST00000506510 PPP1R15BQ5SWA1 713 aa12.48□□□□□ -0.41
PDE4D-215ENST00000506510 ZNF710Q8N1W2 664 aa12.47□□□□□ -0.41
PDE4D-215ENST00000506510 DDX27Q96GQ7 796 aaKnown RBP12.47□□□□□ -0.41
PDE4D-215ENST00000506510 MFSD10Q14728 455 aa12.45□□□□□ -0.42
PDE4D-215ENST00000506510 RIMBP2O15034 1052 aa12.43□□□□□ -0.42
PDE4D-215ENST00000506510 HAP1P54257 671 aaPredicted RBP12.4□□□□□ -0.42
PDE4D-215ENST00000506510 SLC34A2O95436 690 aa12.38□□□□□ -0.43
PDE4D-215ENST00000506510 MARVELD3Q96A59 401 aa12.38□□□□□ -0.43
PDE4D-215ENST00000506510 ZSWIM6Q9HCJ5 1215 aa12.38□□□□□ -0.43
PDE4D-215ENST00000506510 ARSIQ5FYB1 569 aa12.37□□□□□ -0.43
PDE4D-215ENST00000506510 HOXB1P14653 301 aaPredicted RBP12.36□□□□□ -0.43
PDE4D-215ENST00000506510 GPR153Q6NV75 609 aa12.36□□□□□ -0.43
PDE4D-215ENST00000506510 UPF1Q92900 1129 aaKnown RBP eCLIP12.36□□□□□ -0.43
PDE4D-215ENST00000506510 KHSRPQ92945 711 aaKnown RBP eCLIP12.36□□□□□ -0.435e-6■□□□□ 9
PDE4D-215ENST00000506510 PCDHGA4Q9Y5G9 962 aa12.36□□□□□ -0.43
PDE4D-215ENST00000506510 POTEMA6NI47 508 aa12.33□□□□□ -0.44
PDE4D-215ENST00000506510 EMP3P54852 163 aa12.33□□□□□ -0.44
PDE4D-215ENST00000506510 POTEGQ6S5H5 508 aa12.33□□□□□ -0.44
PDE4D-215ENST00000506510 PTCD2Q8WV60 388 aaKnown RBP12.33□□□□□ -0.44
PDE4D-215ENST00000506510 WDR70Q9NW82 654 aa12.32□□□□□ -0.44
PDE4D-215ENST00000506510 OXER1Q8TDS5 423 aa12.31□□□□□ -0.44
PDE4D-215ENST00000506510 EMILIN3Q9NT22 766 aa12.31□□□□□ -0.44
PDE4D-215ENST00000506510 NUDT7P0C024 238 aa12.3□□□□□ -0.44
PDE4D-215ENST00000506510 CAMK2BQ13554 666 aa12.28□□□□□ -0.44
PDE4D-215ENST00000506510 FAM205CA6NFA0 338 aa12.26□□□□□ -0.45
PDE4D-215ENST00000506510 TBC1D12O60347 775 aa12.26□□□□□ -0.45
PDE4D-215ENST00000506510 E2F4Q16254 413 aa12.25□□□□□ -0.45
PDE4D-215ENST00000506510 ERBB3P21860 1342 aa12.24□□□□□ -0.45
PDE4D-215ENST00000506510 HS3ST6Q96QI5 342 aa12.23□□□□□ -0.45
PDE4D-215ENST00000506510 DPYSL4O14531 572 aa12.22□□□□□ -0.45
PDE4D-215ENST00000506510 MAP3K9P80192 1104 aa12.22□□□□□ -0.45
PDE4D-215ENST00000506510 KDM4FA0A1W2PPD8 638 aa12.21□□□□□ -0.45
PDE4D-215ENST00000506510 POTEB3A0JP26 581 aa12.21□□□□□ -0.45
PDE4D-215ENST00000506510 POTEBQ6S5H4 581 aa12.21□□□□□ -0.45
PDE4D-215ENST00000506510 ZNF316A6NFI3 1004 aaPredicted RBP12.2□□□□□ -0.46
PDE4D-215ENST00000506510 VARS2Q5ST30 1063 aaKnown RBP12.2□□□□□ -0.46
PDE4D-215ENST00000506510 LHX6Q9UPM6 363 aa12.2□□□□□ -0.46
PDE4D-215ENST00000506510 KDM2AQ9Y2K7 1162 aa12.19□□□□□ -0.46
PDE4D-215ENST00000506510 EVI5O60447 810 aa12.18□□□□□ -0.46
PDE4D-215ENST00000506510 KCNV2Q8TDN2 545 aa12.16□□□□□ -0.46
PDE4D-215ENST00000506510 VSIG10Q8N0Z9 540 aa12.13□□□□□ -0.47
PDE4D-215ENST00000506510 CDAN1Q8IWY9 1227 aa12.12□□□□□ -0.47
PDE4D-215ENST00000506510 PDIA6Q15084 440 aa12.1□□□□□ -0.47
PDE4D-215ENST00000506510 ANO8Q9HCE9 1232 aaPredicted RBP12.1□□□□□ -0.47
PDE4D-215ENST00000506510 ARIH1Q9Y4X5 557 aaPredicted RBP12.1□□□□□ -0.47
PDE4D-215ENST00000506510 P3H3Q8IVL6 736 aa12.09□□□□□ -0.47
PDE4D-215ENST00000506510 ZNF454Q8N9F8 522 aa12.08□□□□□ -0.48
PDE4D-215ENST00000506510 PSDA5PKW4 1024 aaPredicted RBP12.07□□□□□ -0.48
PDE4D-215ENST00000506510 ZNF687Q8N1G0 1237 aa12.06□□□□□ -0.48
PDE4D-215ENST00000506510 ARHGEF1Q92888 912 aaKnown RBP12.06□□□□□ -0.48
PDE4D-215ENST00000506510 PPP4R3BQ5MIZ7 849 aa12.05□□□□□ -0.48
PDE4D-215ENST00000506510 SPDYE16A6NNV3 312 aaPredicted RBP12.04□□□□□ -0.48
PDE4D-215ENST00000506510 FOSBP53539 338 aa12.04□□□□□ -0.48
PDE4D-215ENST00000506510 JPH4Q96JJ6 628 aa12.04□□□□□ -0.48
PDE4D-215ENST00000506510 DDX12PQ92771 950 aa12.03□□□□□ -0.48
PDE4D-215ENST00000506510 KRTAP3-3Q9BYR6 98 aa12.02□□□□□ -0.49
PDE4D-215ENST00000506510 KRTAP3-2Q9BYR7 98 aa12.02□□□□□ -0.49
PDE4D-215ENST00000506510 PCDH10Q9P2E7 1040 aa12.02□□□□□ -0.49
PDE4D-215ENST00000506510 PCDHGA10Q9Y5H3 936 aa12.01□□□□□ -0.49
PDE4D-215ENST00000506510 POTEEQ6S8J3 1075 aa12□□□□□ -0.49
PDE4D-215ENST00000506510 AXIN2Q9Y2T1 843 aa12□□□□□ -0.49
PDE4D-215ENST00000506510 PHF14O94880 888 aa11.99□□□□□ -0.49
PDE4D-215ENST00000506510 PTGER2P43116 358 aa11.99□□□□□ -0.49
PDE4D-215ENST00000506510 ZDHHC16Q969W1 377 aa11.98□□□□□ -0.49
PDE4D-215ENST00000506510 GRXCR2A6NFK2 248 aa11.97□□□□□ -0.49
PDE4D-215ENST00000506510 NBR1Q14596 966 aa11.96□□□□□ -0.49
PDE4D-215ENST00000506510 ADAM33Q9BZ11 813 aa11.96□□□□□ -0.49
PDE4D-215ENST00000506510 PBX2P40425 430 aa11.95□□□□□ -0.5
PDE4D-215ENST00000506510 TYW1BQ6NUM6 668 aa11.95□□□□□ -0.5
PDE4D-215ENST00000506510 PSEN2P49810 448 aa11.94□□□□□ -0.5
PDE4D-215ENST00000506510 KCNK17Q96T54 332 aa11.94□□□□□ -0.5
PDE4D-215ENST00000506510 BCL2L12Q9HB09 334 aa11.94□□□□□ -0.5
PDE4D-215ENST00000506510 ARHGAP33O14559 1287 aa11.93□□□□□ -0.5
PDE4D-215ENST00000506510 MLLT3P42568 568 aaPredicted RBP11.93□□□□□ -0.5
PDE4D-215ENST00000506510 EPAS1Q99814 870 aa11.93□□□□□ -0.5
PDE4D-215ENST00000506510 SEMA3EO15041 775 aa11.92□□□□□ -0.5
PDE4D-215ENST00000506510 SLC24A1O60721 1099 aa11.92□□□□□ -0.5
PDE4D-215ENST00000506510 FBXW7Q969H0 707 aa11.92□□□□□ -0.5
PDE4D-215ENST00000506510 RBM33Q96EV2 1170 aaKnown RBP11.92□□□□□ -0.5
PDE4D-215ENST00000506510 PTPREP23469 700 aa11.9□□□□□ -0.5
PDE4D-215ENST00000506510 LSM11P83369 360 aaKnown RBP eCLIP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms