RNA–Protein interactions for RNA: ENST00000506267.1

HMGB2-204, Transcript of high mobility group box 2, humanhuman

TSL 3

Gene HMGB2, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-204ENST00000506267 ARHGAP5Q13017 1502 aa36.02■■■■□ 3.36
HMGB2-204ENST00000506267 PREX2Q70Z35 1606 aa36.01■■■■□ 3.35
HMGB2-204ENST00000506267 CDC42BPAQ5VT25 1732 aa35.98■■■■□ 3.35
HMGB2-204ENST00000506267 VPS8Q8N3P4 1428 aa35.98■■■■□ 3.35
HMGB2-204ENST00000506267 ZMYM4Q5VZL5 1548 aa35.98■■■■□ 3.35
HMGB2-204ENST00000506267 POGZQ7Z3K3 1410 aa35.97■■■■□ 3.35
HMGB2-204ENST00000506267 MTUS2Q5JR59 1369 aa35.93■■■■□ 3.34
HMGB2-204ENST00000506267 ARHGEF40Q8TER5 1519 aa35.91■■■■□ 3.34
HMGB2-204ENST00000506267 GPATCH8Q9UKJ3 1502 aaKnown RBP35.91■■■■□ 3.34
HMGB2-204ENST00000506267 EHBP1L1Q8N3D4 1523 aa35.88■■■■□ 3.33
HMGB2-204ENST00000506267 MAGI2Q86UL8 1455 aa35.87■■■■□ 3.33
HMGB2-204ENST00000506267 YEATS2Q9ULM3 1422 aa35.85■■■■□ 3.33
HMGB2-204ENST00000506267 ARHGEF12Q9NZN5 1544 aa35.84■■■■□ 3.33
HMGB2-204ENST00000506267 TIAM1Q13009 1591 aa35.84■■■■□ 3.33
HMGB2-204ENST00000506267 ABCC1P33527 1531 aa35.83■■■■□ 3.33
HMGB2-204ENST00000506267 ZFYVE16Q7Z3T8 1539 aa35.83■■■■□ 3.33
HMGB2-204ENST00000506267 ZNF518AQ6AHZ1 1483 aa35.82■■■■□ 3.32
HMGB2-204ENST00000506267 KDM5CP41229 1560 aa35.81■■■■□ 3.32
HMGB2-204ENST00000506267 AFAP1Q8N556 730 aa35.8■■■■□ 3.32
HMGB2-204ENST00000506267 CCNB3Q8WWL7 1395 aa35.79■■■■□ 3.32
HMGB2-204ENST00000506267 ITSN2Q9NZM3 1697 aa35.78■■■■□ 3.32
HMGB2-204ENST00000506267 SAMD9LQ8IVG5 1584 aa35.77■■■■□ 3.32
HMGB2-204ENST00000506267 TRAPPC8Q9Y2L5 1435 aa35.76■■■■□ 3.32
HMGB2-204ENST00000506267 SIGLEC1Q9BZZ2 1709 aa35.74■■■■□ 3.31
HMGB2-204ENST00000506267 MAP3K1Q13233 1512 aa35.73■■■■□ 3.31
HMGB2-204ENST00000506267 ADAMTSL3P82987 1691 aa35.72■■■■□ 3.31
HMGB2-204ENST00000506267 CFDP1Q9UEE9 299 aaPredicted RBP35.72■■■■□ 3.31
HMGB2-204ENST00000506267 BCORL1Q5H9F3 1711 aa35.71■■■■□ 3.31
HMGB2-204ENST00000506267 ZNF777Q9ULD5 760 aaPredicted RBP35.71■■■■□ 3.31
HMGB2-204ENST00000506267 LRRC9Q6ZRR7 1453 aa35.7■■■■□ 3.31
HMGB2-204ENST00000506267 SUPT6HQ7KZ85 1726 aaKnown RBP35.69■■■■□ 3.3
HMGB2-204ENST00000506267 NCOA2Q15596 1464 aa35.69■■■■□ 3.3
HMGB2-204ENST00000506267 HECW2Q9P2P5 1572 aa35.68■■■■□ 3.3
HMGB2-204ENST00000506267 ATP10AO60312 1499 aa35.67■■■■□ 3.3
HMGB2-204ENST00000506267 MLH3Q9UHC1 1453 aa35.67■■■■□ 3.3
HMGB2-204ENST00000506267 ARID4BQ4LE39 1312 aaPredicted RBP35.67■■■■□ 3.3
HMGB2-204ENST00000506267 SYCP2Q9BX26 1530 aa35.67■■■■□ 3.3
HMGB2-204ENST00000506267 KIAA1107Q9UPP5 1409 aa35.66■■■■□ 3.3
HMGB2-204ENST00000506267 KANK4Q5T7N3 995 aaPredicted RBP35.64■■■■□ 3.3
HMGB2-204ENST00000506267 PLEKHH2Q8IVE3 1493 aa35.62■■■■□ 3.29
HMGB2-204ENST00000506267 HNRNPMP52272 730 aaKnown RBP eCLIP35.62■■■■□ 3.29
HMGB2-204ENST00000506267 C9orf84Q5VXU9 1444 aa35.62■■■■□ 3.29
HMGB2-204ENST00000506267 DIP2CQ9Y2E4 1556 aa35.61■■■■□ 3.29
HMGB2-204ENST00000506267 ZNF644Q9H582 1327 aaPredicted RBP35.59■■■■□ 3.29
HMGB2-204ENST00000506267 KIDINS220Q9ULH0 1771 aa35.59■■■■□ 3.29
HMGB2-204ENST00000506267 ABCA6Q8N139 1617 aa35.58■■■■□ 3.29
HMGB2-204ENST00000506267 MADDQ8WXG6 1647 aa35.57■■■■□ 3.28
HMGB2-204ENST00000506267 REREQ9P2R6 1566 aa35.54■■■■□ 3.28
HMGB2-204ENST00000506267 MYT1LQ9UL68 1186 aa35.53■■■■□ 3.28
HMGB2-204ENST00000506267 PTPRMP28827 1452 aa35.53■■■■□ 3.28
HMGB2-204ENST00000506267 MBD5Q9P267 1494 aa35.53■■■■□ 3.28
HMGB2-204ENST00000506267 SPAG9O60271 1321 aaKnown RBP35.48■■■■□ 3.27
HMGB2-204ENST00000506267 INO80Q9ULG1 1556 aaPredicted RBP35.45■■■■□ 3.27
HMGB2-204ENST00000506267 RIMS1Q86UR5 1692 aaKnown RBP35.44■■■■□ 3.26
HMGB2-204ENST00000506267 CAMSAP2Q08AD1 1489 aa35.44■■■■□ 3.26
HMGB2-204ENST00000506267 MLECQ14165 292 aa35.44■■■■□ 3.26
HMGB2-204ENST00000506267 ATP7AQ04656 1500 aa35.43■■■■□ 3.26
HMGB2-204ENST00000506267 AGLP35573 1532 aa35.42■■■■□ 3.26
HMGB2-204ENST00000506267 APLP2Q06481 763 aa35.41■■■■□ 3.26
HMGB2-204ENST00000506267 FER1L4A9Z1Z3 1794 aa35.38■■■■□ 3.25
HMGB2-204ENST00000506267 MYOM3Q5VTT5 1437 aa35.37■■■■□ 3.25
HMGB2-204ENST00000506267 MIA2Q96PC5 1412 aa35.33■■■■□ 3.25
HMGB2-204ENST00000506267 CCDC141Q6ZP82 1450 aa35.33■■■■□ 3.25
HMGB2-204ENST00000506267 RTEL1-TNFRSF6BF6WH68 1400 aa35.32■■■■□ 3.25
HMGB2-204ENST00000506267 ARHGEF5Q12774 1597 aa35.31■■■■□ 3.24
HMGB2-204ENST00000506267 RSPH4AQ5TD94 716 aa35.31■■■■□ 3.24
HMGB2-204ENST00000506267 PLXNC1O60486 1568 aa35.3■■■■□ 3.24
HMGB2-204ENST00000506267 A2MP01023 1474 aa35.28■■■■□ 3.24
HMGB2-204ENST00000506267 ADGBQ8N7X0 1667 aa35.24■■■■□ 3.23
HMGB2-204ENST00000506267 DHX29Q7Z478 1369 aaKnown RBP35.15■■■■□ 3.22
HMGB2-204ENST00000506267 PLPPR3Q6T4P5 718 aa35.15■■■■□ 3.22
HMGB2-204ENST00000506267 PTPN23Q9H3S7 1636 aa35.14■■■■□ 3.22
HMGB2-204ENST00000506267 MAST1Q9Y2H9 1570 aa35.14■■■■□ 3.22
HMGB2-204ENST00000506267 TSPY4P0CV99 314 aa35.14■■■■□ 3.22
HMGB2-204ENST00000506267 TSPY10P0CW01 314 aa35.14■■■■□ 3.22
HMGB2-204ENST00000506267 FGD6Q6ZV73 1430 aa35.14■■■■□ 3.22
HMGB2-204ENST00000506267 CEBPAP49715 358 aaPredicted RBP35.13■■■■□ 3.21
HMGB2-204ENST00000506267 LMTK3Q96Q04 1460 aa35.11■■■■□ 3.21
HMGB2-204ENST00000506267 TCOF1Q13428 1488 aaKnown RBP35.1■■■■□ 3.21
HMGB2-204ENST00000506267 C3P01024 1663 aa35.08■■■■□ 3.21
HMGB2-204ENST00000506267 CNTLNQ9NXG0 1405 aa35.07■■■■□ 3.21
HMGB2-204ENST00000506267 ESF1Q9H501 851 aaKnown RBP35.04■■■■□ 3.2
HMGB2-204ENST00000506267 ABCC5O15440 1437 aa35.04■■■■□ 3.2
HMGB2-204ENST00000506267 GGT6Q6P531 493 aa35.02■■■■□ 3.2
HMGB2-204ENST00000506267 MROH2AA6NES4 1674 aa35.01■■■■□ 3.2
HMGB2-204ENST00000506267 CROCC2H7BZ55 1655 aa35■■■■□ 3.19
HMGB2-204ENST00000506267 SETD1BQ9UPS6 1966 aaKnown RBP35■■■■□ 3.19
HMGB2-204ENST00000506267 DNMT1P26358 1616 aaKnown RBP34.99■■■■□ 3.19
HMGB2-204ENST00000506267 SHANK2Q9UPX8 1470 aa34.98■■■■□ 3.19
HMGB2-204ENST00000506267 PPP6R1Q9UPN7 881 aa34.98■■■■□ 3.19
HMGB2-204ENST00000506267 CLTCQ00610 1675 aaKnown RBP34.98■■■■□ 3.19
HMGB2-204ENST00000506267 KIF3BO15066 747 aa34.97■■■■□ 3.19
HMGB2-204ENST00000506267 DAPK1P53355 1430 aa34.97■■■■□ 3.19
HMGB2-204ENST00000506267 ZMYM3Q14202 1370 aa34.96■■■■□ 3.19
HMGB2-204ENST00000506267 PREX1Q8TCU6 1659 aa34.95■■■■□ 3.19
HMGB2-204ENST00000506267 HSPA2P54652 639 aa34.89■■■■□ 3.18
HMGB2-204ENST00000506267 DUOX2Q9NRD8 1548 aa34.86■■■■□ 3.17
HMGB2-204ENST00000506267 NPATQ14207 1427 aa34.86■■■■□ 3.17
HMGB2-204ENST00000506267 RNF17Q9BXT8 1623 aaKnown RBP34.85■■■■□ 3.17
HMGB2-204ENST00000506267 EIF2AK4Q9P2K8 1649 aaKnown RBP34.85■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms