RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 LRRIQ1Q96JM4 1722 aa9.8□□□□□ -0.84
GYPB-205ENST00000505583 ZMYM4Q5VZL5 1548 aa9.8□□□□□ -0.84
GYPB-205ENST00000505583 YEATS2Q9ULM3 1422 aa9.8□□□□□ -0.84
GYPB-205ENST00000505583 LMTK3Q96Q04 1460 aa9.79□□□□□ -0.84
GYPB-205ENST00000505583 HECW1Q76N89 1606 aa9.79□□□□□ -0.84
GYPB-205ENST00000505583 ARHGAP35Q9NRY4 1499 aa9.79□□□□□ -0.84
GYPB-205ENST00000505583 KIF14Q15058 1648 aa9.78□□□□□ -0.84
GYPB-205ENST00000505583 PCF11O94913 1555 aaKnown RBP9.78□□□□□ -0.84
GYPB-205ENST00000505583 ZFYVE16Q7Z3T8 1539 aa9.77□□□□□ -0.84
GYPB-205ENST00000505583 MYO5CQ9NQX4 1742 aa9.77□□□□□ -0.85
GYPB-205ENST00000505583 PLCH2O75038 1416 aa9.76□□□□□ -0.85
GYPB-205ENST00000505583 UBTFP17480 764 aaKnown RBP9.76□□□□□ -0.85
GYPB-205ENST00000505583 POGZQ7Z3K3 1410 aa9.75□□□□□ -0.85
GYPB-205ENST00000505583 SCAPERQ9BY12 1400 aa9.75□□□□□ -0.85
GYPB-205ENST00000505583 ATP1B4Q9UN42 357 aaPredicted RBP9.75□□□□□ -0.85
GYPB-205ENST00000505583 FER1L4A9Z1Z3 1794 aa9.75□□□□□ -0.85
GYPB-205ENST00000505583 HSPA2P54652 639 aa9.74□□□□□ -0.85
GYPB-205ENST00000505583 FMN1Q68DA7 1419 aa9.73□□□□□ -0.85
GYPB-205ENST00000505583 MAGI2Q86UL8 1455 aa9.73□□□□□ -0.85
GYPB-205ENST00000505583 MLECQ14165 292 aa9.73□□□□□ -0.85
GYPB-205ENST00000505583 CDC42BPBQ9Y5S2 1711 aa9.72□□□□□ -0.85
GYPB-205ENST00000505583 FBXO41Q8TF61 875 aa9.71□□□□□ -0.86
GYPB-205ENST00000505583 TROQ12816 1431 aaPredicted RBP9.71□□□□□ -0.86
GYPB-205ENST00000505583 ARHGEF12Q9NZN5 1544 aa9.71□□□□□ -0.86
GYPB-205ENST00000505583 EFCAB2Q5VUJ9 269 aa9.7□□□□□ -0.86
GYPB-205ENST00000505583 ATP10AO60312 1499 aa9.7□□□□□ -0.86
GYPB-205ENST00000505583 ARHGAP5Q13017 1502 aa9.7□□□□□ -0.86
GYPB-205ENST00000505583 KDM5CP41229 1560 aa9.7□□□□□ -0.86
GYPB-205ENST00000505583 NCBP3Q53F19 620 aaKnown RBP9.69□□□□□ -0.86
GYPB-205ENST00000505583 C9orf84Q5VXU9 1444 aa9.69□□□□□ -0.86
GYPB-205ENST00000505583 AFAP1Q8N556 730 aa9.69□□□□□ -0.86
GYPB-205ENST00000505583 DIP2CQ9Y2E4 1556 aa9.68□□□□□ -0.86
GYPB-205ENST00000505583 CEBPAP49715 358 aaPredicted RBP9.68□□□□□ -0.86
GYPB-205ENST00000505583 CDC42BPAQ5VT25 1732 aa9.68□□□□□ -0.86
GYPB-205ENST00000505583 PREX2Q70Z35 1606 aa9.67□□□□□ -0.86
GYPB-205ENST00000505583 ABCA6Q8N139 1617 aa9.67□□□□□ -0.86
GYPB-205ENST00000505583 ZNF518AQ6AHZ1 1483 aa9.67□□□□□ -0.86
GYPB-205ENST00000505583 CDK11AQ9UQ88 783 aaPredicted RBP9.67□□□□□ -0.86
GYPB-205ENST00000505583 PREX1Q8TCU6 1659 aa9.67□□□□□ -0.86
GYPB-205ENST00000505583 ITSN2Q9NZM3 1697 aa9.66□□□□□ -0.86
GYPB-205ENST00000505583 ABCC1P33527 1531 aa9.66□□□□□ -0.86
GYPB-205ENST00000505583 CLIP1P30622 1438 aa9.65□□□□□ -0.86
GYPB-205ENST00000505583 CASKIN1Q8WXD9 1431 aa9.65□□□□□ -0.86
GYPB-205ENST00000505583 TRAPPC8Q9Y2L5 1435 aa9.65□□□□□ -0.86
GYPB-205ENST00000505583 STRCQ7RTU9 1775 aa9.65□□□□□ -0.86
GYPB-205ENST00000505583 C3P01024 1663 aa9.64□□□□□ -0.87
GYPB-205ENST00000505583 REREQ9P2R6 1566 aa9.64□□□□□ -0.87
GYPB-205ENST00000505583 KIDINS220Q9ULH0 1771 aa9.64□□□□□ -0.87
GYPB-205ENST00000505583 CCDC18Q5T9S5 1454 aa9.63□□□□□ -0.87
GYPB-205ENST00000505583 MLH3Q9UHC1 1453 aa9.63□□□□□ -0.87
GYPB-205ENST00000505583 SAMD9LQ8IVG5 1584 aa9.62□□□□□ -0.87
GYPB-205ENST00000505583 MYT1LQ9UL68 1186 aa9.61□□□□□ -0.87
GYPB-205ENST00000505583 FYCO1Q9BQS8 1478 aa9.6□□□□□ -0.87
GYPB-205ENST00000505583 CERKQ8TCT0 537 aa9.6□□□□□ -0.87
GYPB-205ENST00000505583 AGLP35573 1532 aa9.6□□□□□ -0.87
GYPB-205ENST00000505583 SCAF1Q9H7N4 1312 aaKnown RBP9.59□□□□□ -0.87
GYPB-205ENST00000505583 NPM3O75607 178 aaKnown RBP9.59□□□□□ -0.87
GYPB-205ENST00000505583 SYCP2Q9BX26 1530 aa9.59□□□□□ -0.87
GYPB-205ENST00000505583 GPATCH8Q9UKJ3 1502 aaKnown RBP9.59□□□□□ -0.87
GYPB-205ENST00000505583 SETD1BQ9UPS6 1966 aaKnown RBP9.59□□□□□ -0.87
GYPB-205ENST00000505583 ZNF777Q9ULD5 760 aaPredicted RBP9.58□□□□□ -0.88
GYPB-205ENST00000505583 SUPT6HQ7KZ85 1726 aaKnown RBP9.58□□□□□ -0.88
GYPB-205ENST00000505583 UHRF1BP1Q6BDS2 1440 aa9.57□□□□□ -0.88
GYPB-205ENST00000505583 HNRNPMP52272 730 aaKnown RBP eCLIP9.56□□□□□ -0.88
GYPB-205ENST00000505583 INO80Q9ULG1 1556 aaPredicted RBP9.55□□□□□ -0.88
GYPB-205ENST00000505583 MAPK8IP2Q13387 824 aaPredicted RBP9.55□□□□□ -0.88
GYPB-205ENST00000505583 CNKSR2Q8WXI2 1034 aa9.55□□□□□ -0.88
GYPB-205ENST00000505583 SLC4A1APQ9BWU0 796 aaKnown RBP9.55□□□□□ -0.88
GYPB-205ENST00000505583 ATP7AQ04656 1500 aa9.55□□□□□ -0.88
GYPB-205ENST00000505583 MROH2AA6NES4 1674 aa9.55□□□□□ -0.88
GYPB-205ENST00000505583 CLTCQ00610 1675 aaKnown RBP9.55□□□□□ -0.88
GYPB-205ENST00000505583 PLXNC1O60486 1568 aa9.54□□□□□ -0.88
GYPB-205ENST00000505583 TIAM1Q13009 1591 aa9.53□□□□□ -0.88
GYPB-205ENST00000505583 SPAG9O60271 1321 aaKnown RBP9.53□□□□□ -0.88
GYPB-205ENST00000505583 ZNF644Q9H582 1327 aaPredicted RBP9.53□□□□□ -0.88
GYPB-205ENST00000505583 LTBP4Q8N2S1 1624 aa9.53□□□□□ -0.88
GYPB-205ENST00000505583 ESF1Q9H501 851 aaKnown RBP9.52□□□□□ -0.89
GYPB-205ENST00000505583 CNTLNQ9NXG0 1405 aa9.52□□□□□ -0.89
GYPB-205ENST00000505583 CFDP1Q9UEE9 299 aaPredicted RBP9.52□□□□□ -0.89
GYPB-205ENST00000505583 DMRT2Q9Y5R5 561 aa9.52□□□□□ -0.89
GYPB-205ENST00000505583 ZMYM3Q14202 1370 aa9.51□□□□□ -0.89
GYPB-205ENST00000505583 PTPRTO14522 1441 aa9.51□□□□□ -0.89
GYPB-205ENST00000505583 NCOA1Q15788 1441 aa9.51□□□□□ -0.89
GYPB-205ENST00000505583 KIAA1107Q9UPP5 1409 aa9.51□□□□□ -0.89
GYPB-205ENST00000505583 CAMSAP1Q5T5Y3 1602 aa9.51□□□□□ -0.89
GYPB-205ENST00000505583 A2MP01023 1474 aa9.51□□□□□ -0.89
GYPB-205ENST00000505583 CCNB3Q8WWL7 1395 aa9.5□□□□□ -0.89
GYPB-205ENST00000505583 MYO3AQ8NEV4 1616 aa9.5□□□□□ -0.89
GYPB-205ENST00000505583 MBD5Q9P267 1494 aa9.5□□□□□ -0.89
GYPB-205ENST00000505583 ADGBQ8N7X0 1667 aa9.5□□□□□ -0.89
GYPB-205ENST00000505583 MTUS2Q5JR59 1369 aa9.5□□□□□ -0.89
GYPB-205ENST00000505583 NPATQ14207 1427 aa9.49□□□□□ -0.89
GYPB-205ENST00000505583 PLEKHH2Q8IVE3 1493 aa9.49□□□□□ -0.89
GYPB-205ENST00000505583 ZNF142P52746 1687 aaPredicted RBP9.48□□□□□ -0.89
GYPB-205ENST00000505583 PTPRKQ15262 1439 aa9.48□□□□□ -0.89
GYPB-205ENST00000505583 EHBP1L1Q8N3D4 1523 aa9.48□□□□□ -0.89
GYPB-205ENST00000505583 CEP170BQ9Y4F5 1589 aaPredicted RBP9.47□□□□□ -0.89
GYPB-205ENST00000505583 GGT6Q6P531 493 aa9.47□□□□□ -0.89
GYPB-205ENST00000505583 NCKAP5LQ9HCH0 1330 aa9.47□□□□□ -0.89
GYPB-205ENST00000505583 CEP162Q5TB80 1403 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms