RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 ARID4BQ4LE39 1312 aaPredicted RBP20.87■□□□□ 0.93
RNF4-206ENST00000504782 MADDQ8WXG6 1647 aa20.87■□□□□ 0.93
RNF4-206ENST00000504782 CDC42BPBQ9Y5S2 1711 aa20.86■□□□□ 0.93
RNF4-206ENST00000504782 CLIP1P30622 1438 aa20.86■□□□□ 0.93
RNF4-206ENST00000504782 ZFYVE16Q7Z3T8 1539 aa20.85■□□□□ 0.93
RNF4-206ENST00000504782 PTPRMP28827 1452 aa20.85■□□□□ 0.93
RNF4-206ENST00000504782 POGZQ7Z3K3 1410 aa20.85■□□□□ 0.93
RNF4-206ENST00000504782 EFCAB2Q5VUJ9 269 aa20.83■□□□□ 0.93
RNF4-206ENST00000504782 ARHGAP5Q13017 1502 aa20.83■□□□□ 0.92
RNF4-206ENST00000504782 CCDC18Q5T9S5 1454 aa20.81■□□□□ 0.92
RNF4-206ENST00000504782 RIMS1Q86UR5 1692 aaKnown RBP20.81■□□□□ 0.92
RNF4-206ENST00000504782 FYCO1Q9BQS8 1478 aa20.81■□□□□ 0.92
RNF4-206ENST00000504782 MAGI2Q86UL8 1455 aa20.79■□□□□ 0.92
RNF4-206ENST00000504782 PREX2Q70Z35 1606 aa20.78■□□□□ 0.92
RNF4-206ENST00000504782 CDC42BPAQ5VT25 1732 aa20.78■□□□□ 0.92
RNF4-206ENST00000504782 AFAP1Q8N556 730 aa20.76■□□□□ 0.91
RNF4-206ENST00000504782 ARHGEF12Q9NZN5 1544 aa20.74■□□□□ 0.91
RNF4-206ENST00000504782 MLECQ14165 292 aa20.74■□□□□ 0.91
RNF4-206ENST00000504782 KDM5CP41229 1560 aa20.73■□□□□ 0.91
RNF4-206ENST00000504782 ATP10AO60312 1499 aa20.73■□□□□ 0.91
RNF4-206ENST00000504782 ZNF518AQ6AHZ1 1483 aa20.72■□□□□ 0.91
RNF4-206ENST00000504782 ITSN2Q9NZM3 1697 aa20.72■□□□□ 0.91
RNF4-206ENST00000504782 PLPPR3Q6T4P5 718 aa20.71■□□□□ 0.91
RNF4-206ENST00000504782 ABCC1P33527 1531 aa20.71■□□□□ 0.91
RNF4-206ENST00000504782 TRAPPC8Q9Y2L5 1435 aa20.7■□□□□ 0.9
RNF4-206ENST00000504782 FER1L4A9Z1Z3 1794 aa20.7■□□□□ 0.9
RNF4-206ENST00000504782 C9orf84Q5VXU9 1444 aa20.69■□□□□ 0.9
RNF4-206ENST00000504782 DIP2CQ9Y2E4 1556 aa20.68■□□□□ 0.9
RNF4-206ENST00000504782 ABCA6Q8N139 1617 aa20.67■□□□□ 0.9
RNF4-206ENST00000504782 CEP162Q5TB80 1403 aa20.67■□□□□ 0.9
RNF4-206ENST00000504782 GPATCH8Q9UKJ3 1502 aaKnown RBP20.66■□□□□ 0.9
RNF4-206ENST00000504782 SAMD9LQ8IVG5 1584 aa20.66■□□□□ 0.9
RNF4-206ENST00000504782 MYT1LQ9UL68 1186 aa20.65■□□□□ 0.9
RNF4-206ENST00000504782 LMTK3Q96Q04 1460 aa20.64■□□□□ 0.89
RNF4-206ENST00000504782 ZNF777Q9ULD5 760 aaPredicted RBP20.64■□□□□ 0.89
RNF4-206ENST00000504782 KIDINS220Q9ULH0 1771 aa20.64■□□□□ 0.89
RNF4-206ENST00000504782 LOC105371045A0A1W2PR82 267 aa20.63■□□□□ 0.89
RNF4-206ENST00000504782 MLH3Q9UHC1 1453 aa20.62■□□□□ 0.89
RNF4-206ENST00000504782 ILDR1Q86SU0 546 aaPredicted RBP20.61■□□□□ 0.89
RNF4-206ENST00000504782 SYCP2Q9BX26 1530 aa20.6■□□□□ 0.89
RNF4-206ENST00000504782 HNRNPMP52272 730 aaKnown RBP eCLIP20.59■□□□□ 0.89
RNF4-206ENST00000504782 REREQ9P2R6 1566 aa20.59■□□□□ 0.89
RNF4-206ENST00000504782 MTUS2Q5JR59 1369 aa20.59■□□□□ 0.89
RNF4-206ENST00000504782 CEBPAP49715 358 aaPredicted RBP20.58■□□□□ 0.89
RNF4-206ENST00000504782 HSPA2P54652 639 aa20.57■□□□□ 0.88
RNF4-206ENST00000504782 TIAM1Q13009 1591 aa20.56■□□□□ 0.88
RNF4-206ENST00000504782 CCNB3Q8WWL7 1395 aa20.56■□□□□ 0.88
RNF4-206ENST00000504782 CFDP1Q9UEE9 299 aaPredicted RBP20.54■□□□□ 0.88
RNF4-206ENST00000504782 EHBP1L1Q8N3D4 1523 aa20.53■□□□□ 0.88
RNF4-206ENST00000504782 ZNF644Q9H582 1327 aaPredicted RBP20.53■□□□□ 0.88
RNF4-206ENST00000504782 AGLP35573 1532 aa20.52■□□□□ 0.87
RNF4-206ENST00000504782 SUPT6HQ7KZ85 1726 aaKnown RBP20.5■□□□□ 0.87
RNF4-206ENST00000504782 C3P01024 1663 aa20.5■□□□□ 0.87
RNF4-206ENST00000504782 KIAA1107Q9UPP5 1409 aa20.49■□□□□ 0.87
RNF4-206ENST00000504782 INO80Q9ULG1 1556 aaPredicted RBP20.49■□□□□ 0.87
RNF4-206ENST00000504782 SPAG9O60271 1321 aaKnown RBP20.49■□□□□ 0.87
RNF4-206ENST00000504782 PREX1Q8TCU6 1659 aa20.48■□□□□ 0.87
RNF4-206ENST00000504782 ATP7AQ04656 1500 aa20.48■□□□□ 0.87
RNF4-206ENST00000504782 PLEKHH2Q8IVE3 1493 aa20.46■□□□□ 0.87
RNF4-206ENST00000504782 NCOA2Q15596 1464 aa20.44■□□□□ 0.86
RNF4-206ENST00000504782 MBD5Q9P267 1494 aa20.44■□□□□ 0.86
RNF4-206ENST00000504782 VPS8Q8N3P4 1428 aa20.43■□□□□ 0.86
RNF4-206ENST00000504782 PLXNC1O60486 1568 aa20.42■□□□□ 0.86
RNF4-206ENST00000504782 A2MP01023 1474 aa20.39■□□□□ 0.85
RNF4-206ENST00000504782 SETD1BQ9UPS6 1966 aaKnown RBP20.39■□□□□ 0.85
RNF4-206ENST00000504782 STRCQ7RTU9 1775 aa20.39■□□□□ 0.85
RNF4-206ENST00000504782 ADGBQ8N7X0 1667 aa20.38■□□□□ 0.85
RNF4-206ENST00000504782 CLTCQ00610 1675 aaKnown RBP20.38■□□□□ 0.85
RNF4-206ENST00000504782 CAMSAP2Q08AD1 1489 aa20.37■□□□□ 0.85
RNF4-206ENST00000504782 LRRC9Q6ZRR7 1453 aa20.37■□□□□ 0.85
RNF4-206ENST00000504782 KANK4Q5T7N3 995 aaPredicted RBP20.37■□□□□ 0.85
RNF4-206ENST00000504782 ESF1Q9H501 851 aaKnown RBP20.37■□□□□ 0.85
RNF4-206ENST00000504782 MROH2AA6NES4 1674 aa20.35■□□□□ 0.85
RNF4-206ENST00000504782 UHRF1BP1Q6BDS2 1440 aa20.35■□□□□ 0.85
RNF4-206ENST00000504782 CNTLNQ9NXG0 1405 aa20.33■□□□□ 0.84
RNF4-206ENST00000504782 GGT6Q6P531 493 aa20.32■□□□□ 0.84
RNF4-206ENST00000504782 ZMYM3Q14202 1370 aa20.32■□□□□ 0.84
RNF4-206ENST00000504782 RTEL1-TNFRSF6BF6WH68 1400 aa20.31■□□□□ 0.84
RNF4-206ENST00000504782 CCDC141Q6ZP82 1450 aa20.3■□□□□ 0.84
RNF4-206ENST00000504782 FBXO41Q8TF61 875 aa20.29■□□□□ 0.84
RNF4-206ENST00000504782 MAP3K1Q13233 1512 aa20.27■□□□□ 0.84
RNF4-206ENST00000504782 ARHGEF5Q12774 1597 aa20.27■□□□□ 0.84
RNF4-206ENST00000504782 DHX29Q7Z478 1369 aaKnown RBP20.27■□□□□ 0.84
RNF4-206ENST00000504782 NPATQ14207 1427 aa20.24■□□□□ 0.83
RNF4-206ENST00000504782 PTPRKQ15262 1439 aa20.23■□□□□ 0.83
RNF4-206ENST00000504782 KIF3BO15066 747 aa20.22■□□□□ 0.83
RNF4-206ENST00000504782 RSPH4AQ5TD94 716 aa20.22■□□□□ 0.83
RNF4-206ENST00000504782 MYO3AQ8NEV4 1616 aa20.22■□□□□ 0.83
RNF4-206ENST00000504782 MYOM3Q5VTT5 1437 aa20.2■□□□□ 0.82
RNF4-206ENST00000504782 CERKQ8TCT0 537 aa20.2■□□□□ 0.82
RNF4-206ENST00000504782 CAMSAP1Q5T5Y3 1602 aa20.2■□□□□ 0.82
RNF4-206ENST00000504782 ZNF142P52746 1687 aaPredicted RBP20.19■□□□□ 0.82
RNF4-206ENST00000504782 TSPY4P0CV99 314 aa20.18■□□□□ 0.82
RNF4-206ENST00000504782 TSPY10P0CW01 314 aa20.18■□□□□ 0.82
RNF4-206ENST00000504782 PPP6R1Q9UPN7 881 aa20.18■□□□□ 0.82
RNF4-206ENST00000504782 NCOA1Q15788 1441 aa20.18■□□□□ 0.82
RNF4-206ENST00000504782 MAST1Q9Y2H9 1570 aa20.17■□□□□ 0.82
RNF4-206ENST00000504782 DMRT2Q9Y5R5 561 aa20.16■□□□□ 0.82
RNF4-206ENST00000504782 MIA2Q96PC5 1412 aa20.16■□□□□ 0.82
RNF4-206ENST00000504782 CEP170BQ9Y4F5 1589 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms