RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 FGD6Q6ZV73 1430 aa15.25■□□□□ 0.03
DDX41-203ENST00000504781 HRCP23327 699 aa15.2■□□□□ 0.02
DDX41-203ENST00000504781 CFDP1Q9UEE9 299 aaPredicted RBP15.19■□□□□ 0.02
DDX41-203ENST00000504781 TCOF1Q13428 1488 aaKnown RBP15.18■□□□□ 0.02
DDX41-203ENST00000504781 GPATCH8Q9UKJ3 1502 aaKnown RBP15.17■□□□□ 0.02
DDX41-203ENST00000504781 ITGAEP38570 1179 aa15.16■□□□□ 0.02
DDX41-203ENST00000504781 ADGRL1O94910 1474 aa15.15■□□□□ 0.02
DDX41-203ENST00000504781 KIF14Q15058 1648 aa15.15■□□□□ 0.02
DDX41-203ENST00000504781 PTPN23Q9H3S7 1636 aa15.15■□□□□ 0.02
DDX41-203ENST00000504781 ZEB1P37275 1124 aaPredicted RBP15.15■□□□□ 0.02
DDX41-203ENST00000504781 RSPH4AQ5TD94 716 aa15.15■□□□□ 0.02
DDX41-203ENST00000504781 ITSN2Q9NZM3 1697 aa15.12■□□□□ 0.01
DDX41-203ENST00000504781 ACIN1Q9UKV3 1341 aaKnown RBP15.12■□□□□ 0.01
DDX41-203ENST00000504781 SENP3Q9H4L4 574 aaPredicted RBP15.11■□□□□ 0.01
DDX41-203ENST00000504781 CCER1Q8TC90 406 aaPredicted RBP15.09■□□□□ 0.01
DDX41-203ENST00000504781 SETD5Q9C0A6 1442 aa15.09■□□□□ 0.01
DDX41-203ENST00000504781 EFCAB2Q5VUJ9 269 aa15.08■□□□□ 0
DDX41-203ENST00000504781 ZNF644Q9H582 1327 aaPredicted RBP15.08■□□□□ 0
DDX41-203ENST00000504781 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.07■□□□□ 0
DDX41-203ENST00000504781 RAPGEF3O95398 923 aa15.07■□□□□ 0
DDX41-203ENST00000504781 ZNF777Q9ULD5 760 aaPredicted RBP15.07■□□□□ 0
DDX41-203ENST00000504781 PLCH2O75038 1416 aa15.07■□□□□ 0
DDX41-203ENST00000504781 CDC42BPAQ5VT25 1732 aa15.06■□□□□ 0
DDX41-203ENST00000504781 ABCA9Q8IUA7 1624 aa15.06■□□□□ 0
DDX41-203ENST00000504781 ARAP3Q8WWN8 1544 aa15.04■□□□□ -0
DDX41-203ENST00000504781 PTPRKQ15262 1439 aa15.04■□□□□ -0
DDX41-203ENST00000504781 ROCK1Q13464 1354 aa15.04■□□□□ -0
DDX41-203ENST00000504781 TSPY4P0CV99 314 aa15.04■□□□□ -0
DDX41-203ENST00000504781 TSPY10P0CW01 314 aa15.04■□□□□ -0
DDX41-203ENST00000504781 ABCC5O15440 1437 aa15.03■□□□□ -0
DDX41-203ENST00000504781 CAMSAP2Q08AD1 1489 aa15.02■□□□□ -0
DDX41-203ENST00000504781 DAPK1P53355 1430 aa15.02■□□□□ -0
DDX41-203ENST00000504781 KIAA1107Q9UPP5 1409 aa15.02■□□□□ -0
DDX41-203ENST00000504781 CLSPNQ9HAW4 1339 aa15.02■□□□□ -0
DDX41-203ENST00000504781 CDC42BPBQ9Y5S2 1711 aa15.02□□□□□ -0.01
DDX41-203ENST00000504781 PLEKHH2Q8IVE3 1493 aa15.01□□□□□ -0.01
DDX41-203ENST00000504781 HFM1A2PYH4 1435 aa15.01□□□□□ -0.01
DDX41-203ENST00000504781 RAB3GAP2Q9H2M9 1393 aa15.01□□□□□ -0.01
DDX41-203ENST00000504781 NEO1Q92859 1461 aa15.01□□□□□ -0.01
DDX41-203ENST00000504781 AKNAQ7Z591 1439 aa15□□□□□ -0.01
DDX41-203ENST00000504781 MYO5CQ9NQX4 1742 aa15□□□□□ -0.01
DDX41-203ENST00000504781 DNMT1P26358 1616 aaKnown RBP15□□□□□ -0.01
DDX41-203ENST00000504781 PREX2Q70Z35 1606 aa15□□□□□ -0.01
DDX41-203ENST00000504781 ARID4BQ4LE39 1312 aaPredicted RBP15□□□□□ -0.01
DDX41-203ENST00000504781 HNRNPMP52272 730 aaKnown RBP eCLIP15□□□□□ -0.01
DDX41-203ENST00000504781 CHIC2Q9UKJ5 165 aa15□□□□□ -0.01
DDX41-203ENST00000504781 ARHGAP5Q13017 1502 aa14.98□□□□□ -0.01
DDX41-203ENST00000504781 NAIPQ13075 1403 aa14.98□□□□□ -0.01
DDX41-203ENST00000504781 TTC37Q6PGP7 1564 aa14.98□□□□□ -0.01
DDX41-203ENST00000504781 MBD5Q9P267 1494 aa14.97□□□□□ -0.01
DDX41-203ENST00000504781 RRP7BPQ9NSQ0 103 aa14.97□□□□□ -0.01
DDX41-203ENST00000504781 ARHGEF5Q12774 1597 aa14.97□□□□□ -0.01
DDX41-203ENST00000504781 ANKRD30AQ9BXX3 1397 aa14.96□□□□□ -0.02
DDX41-203ENST00000504781 NCOA1Q15788 1441 aa14.95□□□□□ -0.02
DDX41-203ENST00000504781 FANCAO15360 1455 aa14.95□□□□□ -0.02
DDX41-203ENST00000504781 DHX57Q6P158 1386 aaKnown RBP14.94□□□□□ -0.02
DDX41-203ENST00000504781 DENND4BO75064 1496 aaPredicted RBP14.94□□□□□ -0.02
DDX41-203ENST00000504781 SAMD9LQ8IVG5 1584 aa14.94□□□□□ -0.02
DDX41-203ENST00000504781 ADGRL2O95490 1459 aa14.93□□□□□ -0.02
DDX41-203ENST00000504781 SHANK2Q9UPX8 1470 aa14.93□□□□□ -0.02
DDX41-203ENST00000504781 CCDC141Q6ZP82 1450 aa14.91□□□□□ -0.02
DDX41-203ENST00000504781 PHF23Q9BUL5 403 aaPredicted RBP14.91□□□□□ -0.02
DDX41-203ENST00000504781 FRMPD1Q5SYB0 1578 aa14.9□□□□□ -0.02
DDX41-203ENST00000504781 HECW2Q9P2P5 1572 aa14.9□□□□□ -0.02
DDX41-203ENST00000504781 PLPPR3Q6T4P5 718 aa14.9□□□□□ -0.02
DDX41-203ENST00000504781 C9orf84Q5VXU9 1444 aa14.89□□□□□ -0.03
DDX41-203ENST00000504781 CFAP74Q9C0B2 1584 aa14.89□□□□□ -0.03
DDX41-203ENST00000504781 CROCC2H7BZ55 1655 aa14.87□□□□□ -0.03
DDX41-203ENST00000504781 GCC2Q8IWJ2 1684 aa14.87□□□□□ -0.03
DDX41-203ENST00000504781 RTEL1-TNFRSF6BF6WH68 1400 aa14.87□□□□□ -0.03
DDX41-203ENST00000504781 SCAPERQ9BY12 1400 aa14.87□□□□□ -0.03
DDX41-203ENST00000504781 MYT1LQ9UL68 1186 aa14.87□□□□□ -0.03
DDX41-203ENST00000504781 ADGBQ8N7X0 1667 aa14.87□□□□□ -0.03
DDX41-203ENST00000504781 MAST1Q9Y2H9 1570 aa14.86□□□□□ -0.03
DDX41-203ENST00000504781 MLECQ14165 292 aa14.86□□□□□ -0.03
DDX41-203ENST00000504781 ARHGEF12Q9NZN5 1544 aa14.86□□□□□ -0.03
DDX41-203ENST00000504781 PTPRMP28827 1452 aa14.85□□□□□ -0.03
DDX41-203ENST00000504781 TRIM52Q96A61 297 aa14.85□□□□□ -0.03
DDX41-203ENST00000504781 RICTORQ6R327 1708 aa14.85□□□□□ -0.03
DDX41-203ENST00000504781 SYCP2Q9BX26 1530 aa14.85□□□□□ -0.03
DDX41-203ENST00000504781 ABCC1P33527 1531 aa14.84□□□□□ -0.03
DDX41-203ENST00000504781 AFAP1Q8N556 730 aa14.84□□□□□ -0.03
DDX41-203ENST00000504781 SPAG9O60271 1321 aaKnown RBP14.84□□□□□ -0.03
DDX41-203ENST00000504781 ADAMTSL3P82987 1691 aa14.84□□□□□ -0.03
DDX41-203ENST00000504781 YEATS2Q9ULM3 1422 aa14.83□□□□□ -0.03
DDX41-203ENST00000504781 ARHGEF40Q8TER5 1519 aa14.83□□□□□ -0.04
DDX41-203ENST00000504781 MPHOSPH9Q99550 1183 aa14.83□□□□□ -0.04
DDX41-203ENST00000504781 TIMELESSQ9UNS1 1208 aa14.83□□□□□ -0.04
DDX41-203ENST00000504781 BCORL1Q5H9F3 1711 aa14.83□□□□□ -0.04
DDX41-203ENST00000504781 ANKRD50Q9ULJ7 1429 aa14.83□□□□□ -0.04
DDX41-203ENST00000504781 TRAPPC8Q9Y2L5 1435 aa14.83□□□□□ -0.04
DDX41-203ENST00000504781 ZFYVE16Q7Z3T8 1539 aa14.82□□□□□ -0.04
DDX41-203ENST00000504781 ILDR1Q86SU0 546 aaPredicted RBP14.82□□□□□ -0.04
DDX41-203ENST00000504781 MADDQ8WXG6 1647 aa14.81□□□□□ -0.04
DDX41-203ENST00000504781 KIF15Q9NS87 1388 aa14.81□□□□□ -0.04
DDX41-203ENST00000504781 POGZQ7Z3K3 1410 aa14.81□□□□□ -0.04
DDX41-203ENST00000504781 ZMYM4Q5VZL5 1548 aa14.79□□□□□ -0.04
DDX41-203ENST00000504781 MAGI2Q86UL8 1455 aa14.79□□□□□ -0.04
DDX41-203ENST00000504781 RIMS1Q86UR5 1692 aaKnown RBP14.77□□□□□ -0.04
DDX41-203ENST00000504781 PLXNC1O60486 1568 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms