RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 SAMD9LQ8IVG5 1584 aa15.92■□□□□ 0.14
TPM3-217ENST00000504663 DNMT1P26358 1616 aaKnown RBP15.91■□□□□ 0.14
TPM3-217ENST00000504663 PTPRKQ15262 1439 aa15.91■□□□□ 0.14
TPM3-217ENST00000504663 CAMSAP2Q08AD1 1489 aa15.91■□□□□ 0.14
TPM3-217ENST00000504663 CROCC2H7BZ55 1655 aa15.89■□□□□ 0.13
TPM3-217ENST00000504663 ARAP3Q8WWN8 1544 aa15.89■□□□□ 0.13
TPM3-217ENST00000504663 CYB5RLQ6IPT4 315 aa15.85■□□□□ 0.13
TPM3-217ENST00000504663 ARHGEF5Q12774 1597 aa15.84■□□□□ 0.13
TPM3-217ENST00000504663 ZNF644Q9H582 1327 aaPredicted RBP15.84■□□□□ 0.13
TPM3-217ENST00000504663 PLCH2O75038 1416 aa15.84■□□□□ 0.13
TPM3-217ENST00000504663 GLI2P10070 1586 aa15.83■□□□□ 0.13
TPM3-217ENST00000504663 DIP2BQ9P265 1576 aa15.83■□□□□ 0.13
TPM3-217ENST00000504663 ABCC5O15440 1437 aa15.83■□□□□ 0.12
TPM3-217ENST00000504663 ABCC1P33527 1531 aa15.83■□□□□ 0.12
TPM3-217ENST00000504663 MAP3K4Q9Y6R4 1608 aa15.83■□□□□ 0.12
TPM3-217ENST00000504663 DAPK1P53355 1430 aa15.82■□□□□ 0.12
TPM3-217ENST00000504663 MBD5Q9P267 1494 aa15.82■□□□□ 0.12
TPM3-217ENST00000504663 GCC2Q8IWJ2 1684 aa15.82■□□□□ 0.12
TPM3-217ENST00000504663 ARHGAP5Q13017 1502 aa15.81■□□□□ 0.12
TPM3-217ENST00000504663 FAM50AQ14320 339 aaKnown RBP15.81■□□□□ 0.12
TPM3-217ENST00000504663 ADGBQ8N7X0 1667 aa15.8■□□□□ 0.12
TPM3-217ENST00000504663 ARHGEF12Q9NZN5 1544 aa15.8■□□□□ 0.12
TPM3-217ENST00000504663 SYCP2Q9BX26 1530 aa15.79■□□□□ 0.12
TPM3-217ENST00000504663 AKNAQ7Z591 1439 aa15.78■□□□□ 0.12
TPM3-217ENST00000504663 KCNH8Q96L42 1107 aa15.78■□□□□ 0.12
TPM3-217ENST00000504663 CFDP1Q9UEE9 299 aaPredicted RBP15.78■□□□□ 0.12
TPM3-217ENST00000504663 PPRC1Q5VV67 1664 aaKnown RBP15.78■□□□□ 0.12
TPM3-217ENST00000504663 SHANK2Q9UPX8 1470 aa15.78■□□□□ 0.12
TPM3-217ENST00000504663 KIF13AQ9H1H9 1805 aa15.78■□□□□ 0.12
TPM3-217ENST00000504663 MAST1Q9Y2H9 1570 aa15.77■□□□□ 0.11
TPM3-217ENST00000504663 ADGRL2O95490 1459 aa15.77■□□□□ 0.11
TPM3-217ENST00000504663 HFM1A2PYH4 1435 aa15.75■□□□□ 0.11
TPM3-217ENST00000504663 KIAA1107Q9UPP5 1409 aa15.75■□□□□ 0.11
TPM3-217ENST00000504663 KDM6BO15054 1643 aa15.75■□□□□ 0.11
TPM3-217ENST00000504663 NAIPQ13075 1403 aa15.74■□□□□ 0.11
TPM3-217ENST00000504663 CCDC141Q6ZP82 1450 aa15.73■□□□□ 0.11
TPM3-217ENST00000504663 PLEKHH2Q8IVE3 1493 aa15.73■□□□□ 0.11
TPM3-217ENST00000504663 NPM1P06748 294 aaKnown RBP eCLIP15.73■□□□□ 0.11
TPM3-217ENST00000504663 CFAP74Q9C0B2 1584 aa15.72■□□□□ 0.11
TPM3-217ENST00000504663 ROCK1Q13464 1354 aa15.72■□□□□ 0.11
TPM3-217ENST00000504663 FANCAO15360 1455 aa15.71■□□□□ 0.11
TPM3-217ENST00000504663 ITGAEP38570 1179 aa15.71■□□□□ 0.11
TPM3-217ENST00000504663 SETD5Q9C0A6 1442 aa15.7■□□□□ 0.1
TPM3-217ENST00000504663 ADRA2BP18089 450 aa15.7■□□□□ 0.1
TPM3-217ENST00000504663 RAB3GAP2Q9H2M9 1393 aa15.7■□□□□ 0.1
TPM3-217ENST00000504663 CD109Q6YHK3 1445 aa15.69■□□□□ 0.1
TPM3-217ENST00000504663 PLXNC1O60486 1568 aa15.69■□□□□ 0.1
TPM3-217ENST00000504663 INO80Q9ULG1 1556 aaPredicted RBP15.69■□□□□ 0.1
TPM3-217ENST00000504663 TRAPPC8Q9Y2L5 1435 aa15.68■□□□□ 0.1
TPM3-217ENST00000504663 ZNF777Q9ULD5 760 aaPredicted RBP15.68■□□□□ 0.1
TPM3-217ENST00000504663 C9orf84Q5VXU9 1444 aa15.68■□□□□ 0.1
TPM3-217ENST00000504663 DNAJC5Q9H3Z4 198 aa15.67■□□□□ 0.1
TPM3-217ENST00000504663 ZFYVE16Q7Z3T8 1539 aa15.67■□□□□ 0.1
TPM3-217ENST00000504663 NCOA1Q15788 1441 aa15.67■□□□□ 0.1
TPM3-217ENST00000504663 KDM5CP41229 1560 aa15.66■□□□□ 0.1
TPM3-217ENST00000504663 ADGRL1O94910 1474 aa15.65■□□□□ 0.1
TPM3-217ENST00000504663 NEO1Q92859 1461 aa15.65■□□□□ 0.1
TPM3-217ENST00000504663 HNRNPMP52272 730 aaKnown RBP eCLIP15.65■□□□□ 0.1
TPM3-217ENST00000504663 EFCAB2Q5VUJ9 269 aa15.65■□□□□ 0.1
TPM3-217ENST00000504663 FRMPD1Q5SYB0 1578 aa15.65■□□□□ 0.1
TPM3-217ENST00000504663 RICTORQ6R327 1708 aa15.64■□□□□ 0.09
TPM3-217ENST00000504663 DHX57Q6P158 1386 aaKnown RBP15.63■□□□□ 0.09
TPM3-217ENST00000504663 CHIC2Q9UKJ5 165 aa15.62■□□□□ 0.09
TPM3-217ENST00000504663 POGZQ7Z3K3 1410 aa15.61■□□□□ 0.09
TPM3-217ENST00000504663 PPP6R1Q9UPN7 881 aa15.61■□□□□ 0.09
TPM3-217ENST00000504663 KIDINS220Q9ULH0 1771 aa15.61■□□□□ 0.09
TPM3-217ENST00000504663 TSPOAP1O95153 1857 aa15.61■□□□□ 0.09
TPM3-217ENST00000504663 SCAPERQ9BY12 1400 aa15.6■□□□□ 0.09
TPM3-217ENST00000504663 DENND4BO75064 1496 aaPredicted RBP15.6■□□□□ 0.09
TPM3-217ENST00000504663 HRCP23327 699 aa15.6■□□□□ 0.09
TPM3-217ENST00000504663 ATP7AQ04656 1500 aa15.59■□□□□ 0.09
TPM3-217ENST00000504663 RRP7BPQ9NSQ0 103 aa15.59■□□□□ 0.09
TPM3-217ENST00000504663 RTEL1-TNFRSF6BF6WH68 1400 aa15.58■□□□□ 0.08
TPM3-217ENST00000504663 RSPH4AQ5TD94 716 aa15.57■□□□□ 0.08
TPM3-217ENST00000504663 ANKRD30AQ9BXX3 1397 aa15.57■□□□□ 0.08
TPM3-217ENST00000504663 FAM69CQ0P6D2 419 aa15.56■□□□□ 0.08
TPM3-217ENST00000504663 ZNF518AQ6AHZ1 1483 aa15.56■□□□□ 0.08
TPM3-217ENST00000504663 KDM5DQ9BY66 1539 aa15.56■□□□□ 0.08
TPM3-217ENST00000504663 HECW2Q9P2P5 1572 aa15.56■□□□□ 0.08
TPM3-217ENST00000504663 ABCA6Q8N139 1617 aa15.55■□□□□ 0.08
TPM3-217ENST00000504663 UNC13BO14795 1591 aa15.55■□□□□ 0.08
TPM3-217ENST00000504663 ZMYM4Q5VZL5 1548 aa15.55■□□□□ 0.08
TPM3-217ENST00000504663 KIF15Q9NS87 1388 aa15.55■□□□□ 0.08
TPM3-217ENST00000504663 DUOX2Q9NRD8 1548 aa15.54■□□□□ 0.08
TPM3-217ENST00000504663 MAGI2Q86UL8 1455 aa15.53■□□□□ 0.08
TPM3-217ENST00000504663 TEX14Q8IWB6 1497 aa15.53■□□□□ 0.08
TPM3-217ENST00000504663 MLH3Q9UHC1 1453 aa15.53■□□□□ 0.08
TPM3-217ENST00000504663 ANKRD50Q9ULJ7 1429 aa15.53■□□□□ 0.08
TPM3-217ENST00000504663 PZPP20742 1482 aa15.52■□□□□ 0.08
TPM3-217ENST00000504663 AFAP1Q8N556 730 aa15.52■□□□□ 0.08
TPM3-217ENST00000504663 DEPDC5O75140 1603 aa15.52■□□□□ 0.08
TPM3-217ENST00000504663 DIP2CQ9Y2E4 1556 aa15.51■□□□□ 0.07
TPM3-217ENST00000504663 COL17A1Q9UMD9 1497 aaPredicted RBP15.51■□□□□ 0.07
TPM3-217ENST00000504663 BCORL1Q5H9F3 1711 aa15.51■□□□□ 0.07
TPM3-217ENST00000504663 ERBINQ96RT1 1412 aa15.51■□□□□ 0.07
TPM3-217ENST00000504663 EIF2AK4Q9P2K8 1649 aaKnown RBP15.5■□□□□ 0.07
TPM3-217ENST00000504663 MROH1Q8NDA8 1641 aa15.5■□□□□ 0.07
TPM3-217ENST00000504663 TSPY4P0CV99 314 aa15.49■□□□□ 0.07
TPM3-217ENST00000504663 TSPY10P0CW01 314 aa15.49■□□□□ 0.07
TPM3-217ENST00000504663 SPAG9O60271 1321 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms