RNA–Protein interactions for RNA: ENST00000503784.1

RFC1-206, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-206ENST00000503784 ABCA9Q8IUA7 1624 aa12.06□□□□□ -0.48
RFC1-206ENST00000503784 ATP10BO94823 1461 aa12.05□□□□□ -0.48
RFC1-206ENST00000503784 POGZQ7Z3K3 1410 aa12.04□□□□□ -0.48
RFC1-206ENST00000503784 FANCAO15360 1455 aa12.03□□□□□ -0.48
RFC1-206ENST00000503784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.03□□□□□ -0.48
RFC1-206ENST00000503784 HNRNPUL2Q1KMD3 747 aaKnown RBP12.03□□□□□ -0.48
RFC1-206ENST00000503784 P3H3Q8IVL6 736 aa12.03□□□□□ -0.48
RFC1-206ENST00000503784 DENND4BO75064 1496 aaPredicted RBP12.02□□□□□ -0.48
RFC1-206ENST00000503784 AKNAQ7Z591 1439 aa12.02□□□□□ -0.49
RFC1-206ENST00000503784 YEATS2Q9ULM3 1422 aa12.01□□□□□ -0.49
RFC1-206ENST00000503784 ABCB7O75027 752 aa12□□□□□ -0.49
RFC1-206ENST00000503784 CTTNBP2Q8WZ74 1663 aa12□□□□□ -0.49
RFC1-206ENST00000503784 ZFYVE16Q7Z3T8 1539 aa11.98□□□□□ -0.49
RFC1-206ENST00000503784 CEBPAP49715 358 aaPredicted RBP11.98□□□□□ -0.49
RFC1-206ENST00000503784 FAM9AQ8IZU1 332 aaPredicted RBP11.98□□□□□ -0.49
RFC1-206ENST00000503784 SIGLEC1Q9BZZ2 1709 aa11.97□□□□□ -0.49
RFC1-206ENST00000503784 FHOD3Q2V2M9 1422 aa11.97□□□□□ -0.49
RFC1-206ENST00000503784 TTC37Q6PGP7 1564 aa11.96□□□□□ -0.49
RFC1-206ENST00000503784 SLC4A2P04920 1241 aa11.96□□□□□ -0.49
RFC1-206ENST00000503784 EFCAB5A4FU69 1503 aa11.96□□□□□ -0.5
RFC1-206ENST00000503784 FER1L4A9Z1Z3 1794 aa11.95□□□□□ -0.5
RFC1-206ENST00000503784 RICTORQ6R327 1708 aa11.95□□□□□ -0.5
RFC1-206ENST00000503784 ZNF219Q9P2Y4 722 aaPredicted RBP11.94□□□□□ -0.5
RFC1-206ENST00000503784 ZMYM4Q5VZL5 1548 aa11.94□□□□□ -0.5
RFC1-206ENST00000503784 UHRF1BP1Q6BDS2 1440 aa11.94□□□□□ -0.5
RFC1-206ENST00000503784 PREX1Q8TCU6 1659 aa11.94□□□□□ -0.5
RFC1-206ENST00000503784 STRCQ7RTU9 1775 aa11.92□□□□□ -0.5
RFC1-206ENST00000503784 ARHGEF12Q9NZN5 1544 aa11.91□□□□□ -0.5
RFC1-206ENST00000503784 RAPGEF6Q8TEU7 1601 aa11.9□□□□□ -0.5
RFC1-206ENST00000503784 APLP2Q06481 763 aa11.9□□□□□ -0.5
RFC1-206ENST00000503784 HECW1Q76N89 1606 aa11.89□□□□□ -0.51
RFC1-206ENST00000503784 NUP153P49790 1475 aaKnown RBP11.89□□□□□ -0.51
RFC1-206ENST00000503784 CFAP74Q9C0B2 1584 aa11.89□□□□□ -0.51
RFC1-206ENST00000503784 PTPRTO14522 1441 aa11.89□□□□□ -0.51
RFC1-206ENST00000503784 LTBP4Q8N2S1 1624 aa11.89□□□□□ -0.51
RFC1-206ENST00000503784 MAGI2Q86UL8 1455 aa11.89□□□□□ -0.51
RFC1-206ENST00000503784 C9orf84Q5VXU9 1444 aa11.87□□□□□ -0.51
RFC1-206ENST00000503784 SCAPERQ9BY12 1400 aa11.87□□□□□ -0.51
RFC1-206ENST00000503784 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.87□□□□□ -0.51
RFC1-206ENST00000503784 PLEKHD1A6NEE1 506 aa11.87□□□□□ -0.51
RFC1-206ENST00000503784 UBAP1LF5GYI3 381 aa11.87□□□□□ -0.51
RFC1-206ENST00000503784 RANGAP1P46060 587 aaPredicted RBP11.87□□□□□ -0.51
RFC1-206ENST00000503784 PRXQ9BXM0 1461 aa11.87□□□□□ -0.51
RFC1-206ENST00000503784 ATP10AO60312 1499 aa11.86□□□□□ -0.51
RFC1-206ENST00000503784 IQSEC2Q5JU85 1478 aa11.85□□□□□ -0.51
RFC1-206ENST00000503784 SAMD9Q5K651 1589 aa11.83□□□□□ -0.52
RFC1-206ENST00000503784 MYT1LQ9UL68 1186 aa11.82□□□□□ -0.52
RFC1-206ENST00000503784 NCOA1Q15788 1441 aa11.82□□□□□ -0.52
RFC1-206ENST00000503784 ZNF335Q9H4Z2 1342 aaPredicted RBP11.82□□□□□ -0.52
RFC1-206ENST00000503784 RBM42Q9BTD8 480 aaKnown RBP11.81□□□□□ -0.52
RFC1-206ENST00000503784 MED1Q15648 1581 aaPredicted RBP11.8□□□□□ -0.52
RFC1-206ENST00000503784 ESF1Q9H501 851 aaKnown RBP11.79□□□□□ -0.52
RFC1-206ENST00000503784 CHRDL2Q6WN34 429 aa11.78□□□□□ -0.52
RFC1-206ENST00000503784 NCKAP5LQ9HCH0 1330 aa11.78□□□□□ -0.52
RFC1-206ENST00000503784 PLCH2O75038 1416 aa11.77□□□□□ -0.52
RFC1-206ENST00000503784 CDK13Q14004 1512 aaKnown RBP11.77□□□□□ -0.52
RFC1-206ENST00000503784 HSPA1LP34931 641 aa11.77□□□□□ -0.53
RFC1-206ENST00000503784 TRAPPC8Q9Y2L5 1435 aa11.77□□□□□ -0.53
RFC1-206ENST00000503784 PIP4K2BP78356 416 aa11.76□□□□□ -0.53
RFC1-206ENST00000503784 AFAP1Q8N556 730 aa11.76□□□□□ -0.53
RFC1-206ENST00000503784 CAMSAP1Q5T5Y3 1602 aa11.75□□□□□ -0.53
RFC1-206ENST00000503784 C3P01024 1663 aa11.75□□□□□ -0.53
RFC1-206ENST00000503784 EFCAB2Q5VUJ9 269 aa11.75□□□□□ -0.53
RFC1-206ENST00000503784 ZNF518AQ6AHZ1 1483 aa11.75□□□□□ -0.53
RFC1-206ENST00000503784 DIP2CQ9Y2E4 1556 aa11.74□□□□□ -0.53
RFC1-206ENST00000503784 ATP1B4Q9UN42 357 aaPredicted RBP11.71□□□□□ -0.53
RFC1-206ENST00000503784 KDM5CP41229 1560 aa11.71□□□□□ -0.54
RFC1-206ENST00000503784 ARHGAP5Q13017 1502 aa11.7□□□□□ -0.54
RFC1-206ENST00000503784 SAMD1Q6SPF0 538 aaPredicted RBP11.7□□□□□ -0.54
RFC1-206ENST00000503784 ABCA6Q8N139 1617 aa11.7□□□□□ -0.54
RFC1-206ENST00000503784 SETD1BQ9UPS6 1966 aaKnown RBP11.69□□□□□ -0.54
RFC1-206ENST00000503784 CNTLNQ9NXG0 1405 aa11.69□□□□□ -0.54
RFC1-206ENST00000503784 REREQ9P2R6 1566 aa11.67□□□□□ -0.54
RFC1-206ENST00000503784 AGLP35573 1532 aa11.67□□□□□ -0.54
RFC1-206ENST00000503784 NPATQ14207 1427 aa11.67□□□□□ -0.54
RFC1-206ENST00000503784 MYO5CQ9NQX4 1742 aa11.66□□□□□ -0.54
RFC1-206ENST00000503784 KCNA4P22459 653 aa11.66□□□□□ -0.54
RFC1-206ENST00000503784 PKD2Q13563 968 aa11.66□□□□□ -0.54
RFC1-206ENST00000503784 CSRNP3Q8WYN3 585 aa11.66□□□□□ -0.54
RFC1-206ENST00000503784 KIF14Q15058 1648 aa11.65□□□□□ -0.54
RFC1-206ENST00000503784 TOM1O60784 492 aa11.65□□□□□ -0.54
RFC1-206ENST00000503784 PLA2R1Q13018 1463 aa11.64□□□□□ -0.55
RFC1-206ENST00000503784 MLH3Q9UHC1 1453 aa11.64□□□□□ -0.55
RFC1-206ENST00000503784 ZMYM3Q14202 1370 aa11.64□□□□□ -0.55
RFC1-206ENST00000503784 TCOF1Q13428 1488 aaKnown RBP11.63□□□□□ -0.55
RFC1-206ENST00000503784 MYO3AQ8NEV4 1616 aa11.62□□□□□ -0.55
RFC1-206ENST00000503784 SP7Q8TDD2 431 aaPredicted RBP11.62□□□□□ -0.55
RFC1-206ENST00000503784 CEP170BQ9Y4F5 1589 aaPredicted RBP11.62□□□□□ -0.55
RFC1-206ENST00000503784 CDK11AQ9UQ88 783 aaPredicted RBP11.61□□□□□ -0.55
RFC1-206ENST00000503784 ABCC1P33527 1531 aa11.6□□□□□ -0.55
RFC1-206ENST00000503784 CLIP1P30622 1438 aa11.6□□□□□ -0.55
RFC1-206ENST00000503784 TROQ12816 1431 aaPredicted RBP11.6□□□□□ -0.55
RFC1-206ENST00000503784 ZNF142P52746 1687 aaPredicted RBP11.59□□□□□ -0.55
RFC1-206ENST00000503784 POLA2Q14181 598 aa11.58□□□□□ -0.56
RFC1-206ENST00000503784 CPS1P31327 1500 aa11.58□□□□□ -0.56
RFC1-206ENST00000503784 PTPRKQ15262 1439 aa11.58□□□□□ -0.56
RFC1-206ENST00000503784 MROH2AA6NES4 1674 aa11.58□□□□□ -0.56
RFC1-206ENST00000503784 SHANK2Q9UPX8 1470 aa11.57□□□□□ -0.56
RFC1-206ENST00000503784 EHMT2Q96KQ7 1210 aa11.56□□□□□ -0.56
RFC1-206ENST00000503784 KIDINS220Q9ULH0 1771 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms