RNA–Protein interactions for RNA: ENST00000503705.5

CENPE-203, Transcript of centromere protein E, humanhuman

TSL 2

Gene CENPE, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-203ENST00000503705 AKNAQ7Z591 1439 aa13□□□□□ -0.33
CENPE-203ENST00000503705 DENND4BO75064 1496 aaPredicted RBP12.99□□□□□ -0.33
CENPE-203ENST00000503705 CLIP1P30622 1438 aa12.99□□□□□ -0.33
CENPE-203ENST00000503705 EHBP1L1Q8N3D4 1523 aa12.99□□□□□ -0.33
CENPE-203ENST00000503705 HECW2Q9P2P5 1572 aa12.99□□□□□ -0.33
CENPE-203ENST00000503705 ZFYVE16Q7Z3T8 1539 aa12.99□□□□□ -0.33
CENPE-203ENST00000503705 AGLP35573 1532 aa12.96□□□□□ -0.33
CENPE-203ENST00000503705 SCAF1Q9H7N4 1312 aaKnown RBP12.96□□□□□ -0.34
CENPE-203ENST00000503705 INO80Q9ULG1 1556 aaPredicted RBP12.95□□□□□ -0.34
CENPE-203ENST00000503705 MLH3Q9UHC1 1453 aa12.95□□□□□ -0.34
CENPE-203ENST00000503705 ZNF518AQ6AHZ1 1483 aa12.95□□□□□ -0.34
CENPE-203ENST00000503705 ARHGEF12Q9NZN5 1544 aa12.95□□□□□ -0.34
CENPE-203ENST00000503705 KDM4FA0A1W2PPD8 638 aa12.94□□□□□ -0.34
CENPE-203ENST00000503705 MROH2AA6NES4 1674 aa12.94□□□□□ -0.34
CENPE-203ENST00000503705 DIP2CQ9Y2E4 1556 aa12.94□□□□□ -0.34
CENPE-203ENST00000503705 PLEKHD1A6NEE1 506 aa12.94□□□□□ -0.34
CENPE-203ENST00000503705 SAMD9LQ8IVG5 1584 aa12.94□□□□□ -0.34
CENPE-203ENST00000503705 FAM135AQ9P2D6 1515 aa12.93□□□□□ -0.34
CENPE-203ENST00000503705 ABCA6Q8N139 1617 aa12.93□□□□□ -0.34
CENPE-203ENST00000503705 KIDINS220Q9ULH0 1771 aa12.92□□□□□ -0.34
CENPE-203ENST00000503705 PLXNC1O60486 1568 aa12.92□□□□□ -0.34
CENPE-203ENST00000503705 FER1L4A9Z1Z3 1794 aa12.92□□□□□ -0.34
CENPE-203ENST00000503705 TIAM1Q13009 1591 aa12.92□□□□□ -0.34
CENPE-203ENST00000503705 CCER1Q8TC90 406 aaPredicted RBP12.92□□□□□ -0.34
CENPE-203ENST00000503705 PLEKHH2Q8IVE3 1493 aa12.91□□□□□ -0.34
CENPE-203ENST00000503705 SUPT6HQ7KZ85 1726 aaKnown RBP12.91□□□□□ -0.34
CENPE-203ENST00000503705 ADGBQ8N7X0 1667 aa12.91□□□□□ -0.34
CENPE-203ENST00000503705 MADDQ8WXG6 1647 aa12.91□□□□□ -0.34
CENPE-203ENST00000503705 CEP162Q5TB80 1403 aa12.9□□□□□ -0.34
CENPE-203ENST00000503705 KIAA1107Q9UPP5 1409 aa12.9□□□□□ -0.34
CENPE-203ENST00000503705 TRIM26Q12899 539 aaPredicted RBP12.9□□□□□ -0.34
CENPE-203ENST00000503705 P3H3Q8IVL6 736 aa12.9□□□□□ -0.34
CENPE-203ENST00000503705 CDK11AQ9UQ88 783 aaPredicted RBP12.9□□□□□ -0.34
CENPE-203ENST00000503705 C9orf84Q5VXU9 1444 aa12.89□□□□□ -0.35
CENPE-203ENST00000503705 ARHGAP5Q13017 1502 aa12.89□□□□□ -0.35
CENPE-203ENST00000503705 ARHGEF5Q12774 1597 aa12.88□□□□□ -0.35
CENPE-203ENST00000503705 ATP10AO60312 1499 aa12.87□□□□□ -0.35
CENPE-203ENST00000503705 MAST1Q9Y2H9 1570 aa12.87□□□□□ -0.35
CENPE-203ENST00000503705 GPATCH8Q9UKJ3 1502 aaKnown RBP12.87□□□□□ -0.35
CENPE-203ENST00000503705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.86□□□□□ -0.35
CENPE-203ENST00000503705 UBTFP17480 764 aaKnown RBP12.86□□□□□ -0.35
CENPE-203ENST00000503705 GTF3C3Q9Y5Q9 886 aa12.86□□□□□ -0.35
CENPE-203ENST00000503705 RIMS1Q86UR5 1692 aaKnown RBP12.86□□□□□ -0.35
CENPE-203ENST00000503705 RANGAP1P46060 587 aaPredicted RBP12.86□□□□□ -0.35
CENPE-203ENST00000503705 PREX1Q8TCU6 1659 aa12.85□□□□□ -0.35
CENPE-203ENST00000503705 KCNH8Q96L42 1107 aa12.84□□□□□ -0.35
CENPE-203ENST00000503705 PTPRMP28827 1452 aa12.84□□□□□ -0.35
CENPE-203ENST00000503705 SCAPERQ9BY12 1400 aa12.84□□□□□ -0.35
CENPE-203ENST00000503705 VPS8Q8N3P4 1428 aa12.83□□□□□ -0.36
CENPE-203ENST00000503705 CROCC2H7BZ55 1655 aa12.82□□□□□ -0.36
CENPE-203ENST00000503705 RTEL1-TNFRSF6BF6WH68 1400 aa12.81□□□□□ -0.36
CENPE-203ENST00000503705 ZNF142P52746 1687 aaPredicted RBP12.81□□□□□ -0.36
CENPE-203ENST00000503705 EFCAB2Q5VUJ9 269 aa12.81□□□□□ -0.36
CENPE-203ENST00000503705 EIF2AK4Q9P2K8 1649 aaKnown RBP12.8□□□□□ -0.36
CENPE-203ENST00000503705 YEATS2Q9ULM3 1422 aa12.8□□□□□ -0.36
CENPE-203ENST00000503705 ATP7AQ04656 1500 aa12.8□□□□□ -0.36
CENPE-203ENST00000503705 SYCP2Q9BX26 1530 aa12.8□□□□□ -0.36
CENPE-203ENST00000503705 AEBP2Q6ZN18 517 aaPredicted RBP12.79□□□□□ -0.36
CENPE-203ENST00000503705 C3P01024 1663 aa12.79□□□□□ -0.36
CENPE-203ENST00000503705 MBD5Q9P267 1494 aa12.78□□□□□ -0.36
CENPE-203ENST00000503705 CENPBP07199 599 aaPredicted RBP12.78□□□□□ -0.36
CENPE-203ENST00000503705 RNF17Q9BXT8 1623 aaKnown RBP12.78□□□□□ -0.36
CENPE-203ENST00000503705 ZC3H13Q5T200 1668 aaKnown RBP12.77□□□□□ -0.36
CENPE-203ENST00000503705 LRRC9Q6ZRR7 1453 aa12.77□□□□□ -0.37
CENPE-203ENST00000503705 TRAPPC8Q9Y2L5 1435 aa12.75□□□□□ -0.37
CENPE-203ENST00000503705 LMTK3Q96Q04 1460 aa12.75□□□□□ -0.37
CENPE-203ENST00000503705 NCOA2Q15596 1464 aa12.74□□□□□ -0.37
CENPE-203ENST00000503705 CNTLNQ9NXG0 1405 aa12.74□□□□□ -0.37
CENPE-203ENST00000503705 MIA2Q96PC5 1412 aa12.73□□□□□ -0.37
CENPE-203ENST00000503705 RAPGEF3O95398 923 aa12.73□□□□□ -0.37
CENPE-203ENST00000503705 NEUROD1Q13562 356 aa12.73□□□□□ -0.37
CENPE-203ENST00000503705 SHANK2Q9UPX8 1470 aa12.73□□□□□ -0.37
CENPE-203ENST00000503705 ZEB1P37275 1124 aaPredicted RBP12.72□□□□□ -0.37
CENPE-203ENST00000503705 TCOF1Q13428 1488 aaKnown RBP12.72□□□□□ -0.37
CENPE-203ENST00000503705 CAMSAP2Q08AD1 1489 aa12.71□□□□□ -0.37
CENPE-203ENST00000503705 SETD1BQ9UPS6 1966 aaKnown RBP12.71□□□□□ -0.37
CENPE-203ENST00000503705 CCDC141Q6ZP82 1450 aa12.71□□□□□ -0.38
CENPE-203ENST00000503705 HNRNPUL2Q1KMD3 747 aaKnown RBP12.71□□□□□ -0.38
CENPE-203ENST00000503705 KDM5DQ9BY66 1539 aa12.71□□□□□ -0.38
CENPE-203ENST00000503705 NPATQ14207 1427 aa12.7□□□□□ -0.38
CENPE-203ENST00000503705 DEPDC5O75140 1603 aa12.7□□□□□ -0.38
CENPE-203ENST00000503705 ARID3CA6NKF2 412 aa12.69□□□□□ -0.38
CENPE-203ENST00000503705 CCNB3Q8WWL7 1395 aa12.69□□□□□ -0.38
CENPE-203ENST00000503705 DNMT1P26358 1616 aaKnown RBP12.68□□□□□ -0.38
CENPE-203ENST00000503705 MTUS2Q5JR59 1369 aa12.68□□□□□ -0.38
CENPE-203ENST00000503705 A2MP01023 1474 aa12.67□□□□□ -0.38
CENPE-203ENST00000503705 CLTCQ00610 1675 aaKnown RBP12.67□□□□□ -0.38
CENPE-203ENST00000503705 STRCQ7RTU9 1775 aa12.66□□□□□ -0.38
CENPE-203ENST00000503705 MYO3AQ8NEV4 1616 aa12.66□□□□□ -0.38
CENPE-203ENST00000503705 PPP6R1Q9UPN7 881 aa12.66□□□□□ -0.38
CENPE-203ENST00000503705 MROH1Q8NDA8 1641 aa12.66□□□□□ -0.38
CENPE-203ENST00000503705 RSPH4AQ5TD94 716 aa12.65□□□□□ -0.38
CENPE-203ENST00000503705 RRBP1Q9P2E9 1410 aaKnown RBP12.65□□□□□ -0.38
CENPE-203ENST00000503705 KDM5AP29375 1690 aaKnown RBP12.65□□□□□ -0.38
CENPE-203ENST00000503705 DIEXFQ68CQ4 756 aaKnown RBP12.65□□□□□ -0.38
CENPE-203ENST00000503705 MYOM3Q5VTT5 1437 aa12.65□□□□□ -0.39
CENPE-203ENST00000503705 PTPN23Q9H3S7 1636 aa12.64□□□□□ -0.39
CENPE-203ENST00000503705 PRDM15P57071 1507 aaPredicted RBP12.63□□□□□ -0.39
CENPE-203ENST00000503705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.63□□□□□ -0.394e-6■□□□□ 8.2
CENPE-203ENST00000503705 ACIN1Q9UKV3 1341 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms