RNA–Protein interactions for RNA: ENST00000503255.5

GYPB-203, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-203ENST00000503255 TAOK2Q9UL54 1235 aa11.9□□□□□ -0.5
GYPB-203ENST00000503255 SPNS2Q8IVW8 549 aa11.89□□□□□ -0.51
GYPB-203ENST00000503255 HOXB1P14653 301 aaPredicted RBP11.87□□□□□ -0.51
GYPB-203ENST00000503255 DOK7Q18PE1 504 aa11.87□□□□□ -0.51
GYPB-203ENST00000503255 KRTAP3-3Q9BYR6 98 aa11.85□□□□□ -0.51
GYPB-203ENST00000503255 KRTAP3-2Q9BYR7 98 aa11.85□□□□□ -0.51
GYPB-203ENST00000503255 MMRN1Q13201 1228 aa11.83□□□□□ -0.52
GYPB-203ENST00000503255 ERBB3P21860 1342 aa11.82□□□□□ -0.52
GYPB-203ENST00000503255 PPP1R37O75864 691 aa11.79□□□□□ -0.52
GYPB-203ENST00000503255 RIMBP2O15034 1052 aa11.78□□□□□ -0.52
GYPB-203ENST00000503255 ARSIQ5FYB1 569 aa11.78□□□□□ -0.52
GYPB-203ENST00000503255 GPR153Q6NV75 609 aa11.78□□□□□ -0.52
GYPB-203ENST00000503255 KHSRPQ92945 711 aaKnown RBP eCLIP11.78□□□□□ -0.523e-6■■■□□ 17.7
GYPB-203ENST00000503255 VARS2Q5ST30 1063 aaKnown RBP11.77□□□□□ -0.53
GYPB-203ENST00000503255 C2orf72A6NCS6 295 aa11.76□□□□□ -0.53
GYPB-203ENST00000503255 KIF3CO14782 793 aa11.72□□□□□ -0.53
GYPB-203ENST00000503255 ZSWIM6Q9HCJ5 1215 aa11.71□□□□□ -0.53
GYPB-203ENST00000503255 CHGAP10645 457 aaKnown RBP11.67□□□□□ -0.54
GYPB-203ENST00000503255 HS6ST3Q8IZP7 471 aa11.64□□□□□ -0.55
GYPB-203ENST00000503255 TMC2Q8TDI7 906 aa11.64□□□□□ -0.55
GYPB-203ENST00000503255 NUDT7P0C024 238 aa11.63□□□□□ -0.55
GYPB-203ENST00000503255 ZNF687Q8N1G0 1237 aa11.63□□□□□ -0.55
GYPB-203ENST00000503255 ZNF316A6NFI3 1004 aaPredicted RBP11.61□□□□□ -0.55
GYPB-203ENST00000503255 NKX1-1Q15270 411 aaPredicted RBP11.59□□□□□ -0.55
GYPB-203ENST00000503255 PCDHGA4Q9Y5G9 962 aa11.59□□□□□ -0.55
GYPB-203ENST00000503255 LHX6Q9UPM6 363 aa11.56□□□□□ -0.56
GYPB-203ENST00000503255 ANKRD13DQ6ZTN6 518 aa11.55□□□□□ -0.56
GYPB-203ENST00000503255 SLC34A2O95436 690 aa11.53□□□□□ -0.56
GYPB-203ENST00000503255 AXIN2Q9Y2T1 843 aa11.52□□□□□ -0.57
GYPB-203ENST00000503255 PLPP6Q8IY26 295 aa11.51□□□□□ -0.57
GYPB-203ENST00000503255 DSG2Q14126 1118 aa11.5□□□□□ -0.57
GYPB-203ENST00000503255 POTEEQ6S8J3 1075 aa11.5□□□□□ -0.57
GYPB-203ENST00000503255 GPHNQ9NQX3 736 aaPredicted RBP11.49□□□□□ -0.57
GYPB-203ENST00000503255 MYT1LQ9UL68 1186 aa11.48□□□□□ -0.57
GYPB-203ENST00000503255 FOXK1P85037 733 aa11.47□□□□□ -0.57
GYPB-203ENST00000503255 RNF166Q96A37 237 aaPredicted RBP11.47□□□□□ -0.57
GYPB-203ENST00000503255 LSM11P83369 360 aaKnown RBP eCLIP11.45□□□□□ -0.58
GYPB-203ENST00000503255 KDM4FA0A1W2PPD8 638 aa11.44□□□□□ -0.58
GYPB-203ENST00000503255 PTCD2Q8WV60 388 aaKnown RBP11.44□□□□□ -0.58
GYPB-203ENST00000503255 DNAJC5Q9H3Z4 198 aa11.43□□□□□ -0.58
GYPB-203ENST00000503255 DCAF8L2P0C7V8 631 aa11.42□□□□□ -0.58
GYPB-203ENST00000503255 GTPBP6O43824 516 aaPredicted RBP11.39□□□□□ -0.59
GYPB-203ENST00000503255 UPF1Q92900 1129 aaKnown RBP eCLIP11.38□□□□□ -0.59
GYPB-203ENST00000503255 PSEN2P49810 448 aa11.36□□□□□ -0.59
GYPB-203ENST00000503255 NCKAP5LQ9HCH0 1330 aa11.35□□□□□ -0.59
GYPB-203ENST00000503255 PBX2P40425 430 aa11.35□□□□□ -0.59
GYPB-203ENST00000503255 CRISPLD2Q9H0B8 497 aa11.35□□□□□ -0.59
GYPB-203ENST00000503255 DMRTA1Q5VZB9 504 aa11.34□□□□□ -0.59
GYPB-203ENST00000503255 ARHGAP33O14559 1287 aa11.33□□□□□ -0.6
GYPB-203ENST00000503255 TBC1D12O60347 775 aa11.33□□□□□ -0.6
GYPB-203ENST00000503255 PPP1R15BQ5SWA1 713 aa11.32□□□□□ -0.6
GYPB-203ENST00000503255 OXER1Q8TDS5 423 aa11.32□□□□□ -0.6
GYPB-203ENST00000503255 RYDENQ9NUL5 291 aaKnown RBP11.32□□□□□ -0.6
GYPB-203ENST00000503255 PTGER2P43116 358 aa11.3□□□□□ -0.6
GYPB-203ENST00000503255 PDE4AP27815 886 aa11.29□□□□□ -0.6
GYPB-203ENST00000503255 ADGRD1Q6QNK2 874 aa11.29□□□□□ -0.6
GYPB-203ENST00000503255 LARP6Q9BRS8 491 aaKnown RBP11.29□□□□□ -0.6
GYPB-203ENST00000503255 PSDA5PKW4 1024 aaPredicted RBP11.28□□□□□ -0.6
GYPB-203ENST00000503255 PPP4R3BQ5MIZ7 849 aa11.27□□□□□ -0.61
GYPB-203ENST00000503255 CADPS2Q86UW7 1296 aa11.25□□□□□ -0.61
GYPB-203ENST00000503255 ZNF454Q8N9F8 522 aa11.24□□□□□ -0.61
GYPB-203ENST00000503255 KCNK17Q96T54 332 aa11.24□□□□□ -0.61
GYPB-203ENST00000503255 DDX27Q96GQ7 796 aaKnown RBP11.21□□□□□ -0.61
GYPB-203ENST00000503255 HRO43593 1189 aa11.2□□□□□ -0.62
GYPB-203ENST00000503255 EVI5O60447 810 aa11.19□□□□□ -0.62
GYPB-203ENST00000503255 TK2O00142 265 aa11.18□□□□□ -0.62
GYPB-203ENST00000503255 EMILIN3Q9NT22 766 aa11.18□□□□□ -0.62
GYPB-203ENST00000503255 ANO8Q9HCE9 1232 aaPredicted RBP11.17□□□□□ -0.62
GYPB-203ENST00000503255 FOSBP53539 338 aa11.16□□□□□ -0.62
GYPB-203ENST00000503255 MAP3K9P80192 1104 aa11.15□□□□□ -0.62
GYPB-203ENST00000503255 MFSD10Q14728 455 aa11.15□□□□□ -0.62
GYPB-203ENST00000503255 KCTD12Q96CX2 325 aaKnown RBP11.14□□□□□ -0.63
GYPB-203ENST00000503255 VPS9D1Q9Y2B5 631 aa11.14□□□□□ -0.63
GYPB-203ENST00000503255 BCL2L12Q9HB09 334 aa11.13□□□□□ -0.63
GYPB-203ENST00000503255 STAC3Q96MF2 364 aa11.12□□□□□ -0.63
GYPB-203ENST00000503255 ADAM33Q9BZ11 813 aa11.12□□□□□ -0.63
GYPB-203ENST00000503255 HCSTQ9UBK5 93 aa11.12□□□□□ -0.63
GYPB-203ENST00000503255 KCNH8Q96L42 1107 aa11.1□□□□□ -0.63
GYPB-203ENST00000503255 ZDHHC16Q969W1 377 aa11.09□□□□□ -0.63
GYPB-203ENST00000503255 PTPREP23469 700 aa11.08□□□□□ -0.64
GYPB-203ENST00000503255 JPH4Q96JJ6 628 aa11.08□□□□□ -0.64
GYPB-203ENST00000503255 PLA2G2EQ9NZK7 142 aa11.08□□□□□ -0.64
GYPB-203ENST00000503255 ZBED2Q9BTP6 218 aa11.06□□□□□ -0.64
GYPB-203ENST00000503255 PCDHGA10Q9Y5H3 936 aa11.06□□□□□ -0.64
GYPB-203ENST00000503255 PTPN5P54829 565 aa11.05□□□□□ -0.64
GYPB-203ENST00000503255 BBXQ8WY36 941 aaPredicted RBP11.04□□□□□ -0.64
GYPB-203ENST00000503255 BHMG1C9JSJ3 638 aaPredicted RBP11.03□□□□□ -0.64
GYPB-203ENST00000503255 DPYSL4O14531 572 aa11.02□□□□□ -0.65
GYPB-203ENST00000503255 SLC4A5Q9BY07 1137 aa11.02□□□□□ -0.65
GYPB-203ENST00000503255 COL9A1P20849 921 aa11.01□□□□□ -0.65
GYPB-203ENST00000503255 PROX2Q3B8N5 592 aa10.99□□□□□ -0.65
GYPB-203ENST00000503255 CAMK2BQ13554 666 aa10.98□□□□□ -0.65
GYPB-203ENST00000503255 RTN4Q9NQC3 1192 aaKnown RBP10.98□□□□□ -0.65
GYPB-203ENST00000503255 MRPL50Q8N5N7 158 aaKnown RBP10.97□□□□□ -0.65
GYPB-203ENST00000503255 GOLGA8CPA6NN73 597 aa10.96□□□□□ -0.65
GYPB-203ENST00000503255 TYW1BQ6NUM6 668 aa10.95□□□□□ -0.66
GYPB-203ENST00000503255 SPRYD3Q8NCJ5 442 aa10.95□□□□□ -0.66
GYPB-203ENST00000503255 DDX12PQ92771 950 aa10.95□□□□□ -0.66
GYPB-203ENST00000503255 WNT2BQ93097 391 aa10.95□□□□□ -0.66
GYPB-203ENST00000503255 PHF14O94880 888 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms