RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 HECW1Q76N89 1606 aa20.15■□□□□ 0.82
TNPO1-202ENST00000503084 RAPGEF6Q8TEU7 1601 aa20.12■□□□□ 0.81
TNPO1-202ENST00000503084 MED1Q15648 1581 aaPredicted RBP20.12■□□□□ 0.81
TNPO1-202ENST00000503084 P3H3Q8IVL6 736 aa20.08■□□□□ 0.81
TNPO1-202ENST00000503084 C9orf84Q5VXU9 1444 aa20.08■□□□□ 0.8
TNPO1-202ENST00000503084 NUP153P49790 1475 aaKnown RBP20.06■□□□□ 0.8
TNPO1-202ENST00000503084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.06■□□□□ 0.8
TNPO1-202ENST00000503084 HNRNPUL2Q1KMD3 747 aaKnown RBP20.06■□□□□ 0.8
TNPO1-202ENST00000503084 SETD1BQ9UPS6 1966 aaKnown RBP20.06■□□□□ 0.8
TNPO1-202ENST00000503084 NCOA1Q15788 1441 aa20.05■□□□□ 0.8
TNPO1-202ENST00000503084 UBAP1LF5GYI3 381 aa20.05■□□□□ 0.8
TNPO1-202ENST00000503084 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.05■□□□□ 0.8
TNPO1-202ENST00000503084 ATP10AO60312 1499 aa20.05■□□□□ 0.8
TNPO1-202ENST00000503084 FAM9AQ8IZU1 332 aaPredicted RBP20.03■□□□□ 0.8
TNPO1-202ENST00000503084 C3P01024 1663 aa20■□□□□ 0.79
TNPO1-202ENST00000503084 SAMD9Q5K651 1589 aa20■□□□□ 0.79
TNPO1-202ENST00000503084 SCAPERQ9BY12 1400 aa19.98■□□□□ 0.79
TNPO1-202ENST00000503084 ZNF335Q9H4Z2 1342 aaPredicted RBP19.97■□□□□ 0.79
TNPO1-202ENST00000503084 PRXQ9BXM0 1461 aa19.96■□□□□ 0.79
TNPO1-202ENST00000503084 CAMSAP1Q5T5Y3 1602 aa19.93■□□□□ 0.78
TNPO1-202ENST00000503084 HSPA1LP34931 641 aa19.92■□□□□ 0.78
TNPO1-202ENST00000503084 PLEKHD1A6NEE1 506 aa19.91■□□□□ 0.78
TNPO1-202ENST00000503084 TRAPPC8Q9Y2L5 1435 aa19.91■□□□□ 0.78
TNPO1-202ENST00000503084 DIP2CQ9Y2E4 1556 aa19.88■□□□□ 0.77
TNPO1-202ENST00000503084 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
TNPO1-202ENST00000503084 PLCH2O75038 1416 aa19.86■□□□□ 0.77
TNPO1-202ENST00000503084 KDM5CP41229 1560 aa19.86■□□□□ 0.77
TNPO1-202ENST00000503084 REREQ9P2R6 1566 aa19.86■□□□□ 0.77
TNPO1-202ENST00000503084 SCAF1Q9H7N4 1312 aaKnown RBP19.85■□□□□ 0.77
TNPO1-202ENST00000503084 NCKAP5LQ9HCH0 1330 aa19.84■□□□□ 0.77
TNPO1-202ENST00000503084 ZNF518AQ6AHZ1 1483 aa19.84■□□□□ 0.77
TNPO1-202ENST00000503084 ABCA6Q8N139 1617 aa19.83■□□□□ 0.76
TNPO1-202ENST00000503084 PIP4K2BP78356 416 aa19.81■□□□□ 0.76
TNPO1-202ENST00000503084 AGLP35573 1532 aa19.8■□□□□ 0.76
TNPO1-202ENST00000503084 CDK13Q14004 1512 aaKnown RBP19.79■□□□□ 0.76
TNPO1-202ENST00000503084 MYO5CQ9NQX4 1742 aa19.79■□□□□ 0.76
TNPO1-202ENST00000503084 NPATQ14207 1427 aa19.77■□□□□ 0.76
TNPO1-202ENST00000503084 ESF1Q9H501 851 aaKnown RBP19.77■□□□□ 0.76
TNPO1-202ENST00000503084 PLA2R1Q13018 1463 aa19.77■□□□□ 0.76
TNPO1-202ENST00000503084 TCOF1Q13428 1488 aaKnown RBP19.77■□□□□ 0.76
TNPO1-202ENST00000503084 CNTLNQ9NXG0 1405 aa19.76■□□□□ 0.75
TNPO1-202ENST00000503084 ZNF142P52746 1687 aaPredicted RBP19.76■□□□□ 0.75
TNPO1-202ENST00000503084 MYO3AQ8NEV4 1616 aa19.74■□□□□ 0.75
TNPO1-202ENST00000503084 AFAP1Q8N556 730 aa19.74■□□□□ 0.75
TNPO1-202ENST00000503084 EFCAB2Q5VUJ9 269 aa19.73■□□□□ 0.75
TNPO1-202ENST00000503084 MROH2AA6NES4 1674 aa19.72■□□□□ 0.75
TNPO1-202ENST00000503084 PKD2Q13563 968 aa19.72■□□□□ 0.75
TNPO1-202ENST00000503084 MYT1LQ9UL68 1186 aa19.71■□□□□ 0.75
TNPO1-202ENST00000503084 SUPT6HQ7KZ85 1726 aaKnown RBP19.71■□□□□ 0.75
TNPO1-202ENST00000503084 CEP170BQ9Y4F5 1589 aaPredicted RBP19.7■□□□□ 0.74
TNPO1-202ENST00000503084 PPP6R1Q9UPN7 881 aa19.7■□□□□ 0.74
TNPO1-202ENST00000503084 MLH3Q9UHC1 1453 aa19.7■□□□□ 0.74
TNPO1-202ENST00000503084 TOM1O60784 492 aa19.69■□□□□ 0.74
TNPO1-202ENST00000503084 ARHGAP5Q13017 1502 aa19.69■□□□□ 0.74
TNPO1-202ENST00000503084 KIF14Q15058 1648 aa19.69■□□□□ 0.74
TNPO1-202ENST00000503084 ALKQ9UM73 1620 aa19.69■□□□□ 0.74
TNPO1-202ENST00000503084 CPS1P31327 1500 aa19.68■□□□□ 0.74
TNPO1-202ENST00000503084 RANGAP1P46060 587 aaPredicted RBP19.67■□□□□ 0.74
TNPO1-202ENST00000503084 ZMYM3Q14202 1370 aa19.63■□□□□ 0.73
TNPO1-202ENST00000503084 RGS17Q9UGC6 210 aaPredicted RBP19.62■□□□□ 0.73
TNPO1-202ENST00000503084 KIDINS220Q9ULH0 1771 aa19.61■□□□□ 0.73
TNPO1-202ENST00000503084 SHANK2Q9UPX8 1470 aa19.6■□□□□ 0.73
TNPO1-202ENST00000503084 ABCC1P33527 1531 aa19.6■□□□□ 0.73
TNPO1-202ENST00000503084 PTPRKQ15262 1439 aa19.59■□□□□ 0.73
TNPO1-202ENST00000503084 NEURL4Q96JN8 1562 aa19.59■□□□□ 0.73
TNPO1-202ENST00000503084 SENP3Q9H4L4 574 aaPredicted RBP19.59■□□□□ 0.73
TNPO1-202ENST00000503084 CLTCQ00610 1675 aaKnown RBP19.59■□□□□ 0.73
TNPO1-202ENST00000503084 ITSN2Q9NZM3 1697 aa19.58■□□□□ 0.72
TNPO1-202ENST00000503084 POLR1AO95602 1720 aaPredicted RBP19.57■□□□□ 0.72
TNPO1-202ENST00000503084 CDC42BPBQ9Y5S2 1711 aa19.54■□□□□ 0.72
TNPO1-202ENST00000503084 VWDEQ8N2E2 1590 aa19.54■□□□□ 0.72
TNPO1-202ENST00000503084 DNMT1P26358 1616 aaKnown RBP19.54■□□□□ 0.72
TNPO1-202ENST00000503084 A2ML1A8K2U0 1454 aa19.53■□□□□ 0.72
TNPO1-202ENST00000503084 TROQ12816 1431 aaPredicted RBP19.51■□□□□ 0.71
TNPO1-202ENST00000503084 SETD1AO15047 1707 aaKnown RBP19.51■□□□□ 0.71
TNPO1-202ENST00000503084 PREX2Q70Z35 1606 aa19.51■□□□□ 0.71
TNPO1-202ENST00000503084 RNF17Q9BXT8 1623 aaKnown RBP19.47■□□□□ 0.71
TNPO1-202ENST00000503084 POTEAQ6S8J7 498 aa19.47■□□□□ 0.71
TNPO1-202ENST00000503084 SAMD9LQ8IVG5 1584 aa19.47■□□□□ 0.71
TNPO1-202ENST00000503084 PLXNC1O60486 1568 aa19.46■□□□□ 0.71
TNPO1-202ENST00000503084 CLIP1P30622 1438 aa19.46■□□□□ 0.71
TNPO1-202ENST00000503084 CSRNP3Q8WYN3 585 aa19.45■□□□□ 0.7
TNPO1-202ENST00000503084 CDK11AQ9UQ88 783 aaPredicted RBP19.44■□□□□ 0.7
TNPO1-202ENST00000503084 ATP1B4Q9UN42 357 aaPredicted RBP19.43■□□□□ 0.7
TNPO1-202ENST00000503084 LRRC7Q96NW7 1537 aa19.41■□□□□ 0.7
TNPO1-202ENST00000503084 STRCP1A6NGW2 1772 aa19.41■□□□□ 0.7
TNPO1-202ENST00000503084 SRCAPQ6ZRS2 3230 aa19.41■□□□□ 0.7
TNPO1-202ENST00000503084 SYNMO15061 1565 aa19.4■□□□□ 0.7
TNPO1-202ENST00000503084 ATP7AQ04656 1500 aa19.38■□□□□ 0.69
TNPO1-202ENST00000503084 LRRIQ1Q96JM4 1722 aa19.38■□□□□ 0.69
TNPO1-202ENST00000503084 SYCP2Q9BX26 1530 aa19.37■□□□□ 0.69
TNPO1-202ENST00000503084 A2MP01023 1474 aa19.37■□□□□ 0.69
TNPO1-202ENST00000503084 NPHP4O75161 1426 aaPredicted RBP19.37■□□□□ 0.69
TNPO1-202ENST00000503084 FMN1Q68DA7 1419 aa19.37■□□□□ 0.69
TNPO1-202ENST00000503084 INO80Q9ULG1 1556 aaPredicted RBP19.36■□□□□ 0.69
TNPO1-202ENST00000503084 CDC42BPAQ5VT25 1732 aa19.36■□□□□ 0.69
TNPO1-202ENST00000503084 DEPDC5O75140 1603 aa19.36■□□□□ 0.69
TNPO1-202ENST00000503084 MED14O60244 1454 aa19.35■□□□□ 0.69
TNPO1-202ENST00000503084 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.35■□□□□ 0.69
TNPO1-202ENST00000503084 SPAG9O60271 1321 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms