RNA–Protein interactions for RNA: ENST00000502714.1

YIPF3-210, Transcript of Yip1 domain family member 3, humanhuman

TSL 4

Gene YIPF3, Length 795 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-210ENST00000502714 PREX2Q70Z35 1606 aa18.58■□□□□ 0.56
YIPF3-210ENST00000502714 GPATCH8Q9UKJ3 1502 aaKnown RBP18.58■□□□□ 0.56
YIPF3-210ENST00000502714 ITSN2Q9NZM3 1697 aa18.56■□□□□ 0.56
YIPF3-210ENST00000502714 CFDP1Q9UEE9 299 aaPredicted RBP18.55■□□□□ 0.56
YIPF3-210ENST00000502714 CDC42BPAQ5VT25 1732 aa18.54■□□□□ 0.56
YIPF3-210ENST00000502714 AKNAQ7Z591 1439 aa18.54■□□□□ 0.56
YIPF3-210ENST00000502714 CDC42BPBQ9Y5S2 1711 aa18.52■□□□□ 0.56
YIPF3-210ENST00000502714 MYOM3Q5VTT5 1437 aa18.51■□□□□ 0.55
YIPF3-210ENST00000502714 KDM6BO15054 1643 aa18.51■□□□□ 0.55
YIPF3-210ENST00000502714 ADGRL1O94910 1474 aa18.51■□□□□ 0.55
YIPF3-210ENST00000502714 ZNF777Q9ULD5 760 aaPredicted RBP18.49■□□□□ 0.55
YIPF3-210ENST00000502714 PLEKHH2Q8IVE3 1493 aa18.49■□□□□ 0.55
YIPF3-210ENST00000502714 MIA2Q96PC5 1412 aa18.48■□□□□ 0.55
YIPF3-210ENST00000502714 DENND4BO75064 1496 aaPredicted RBP18.47■□□□□ 0.55
YIPF3-210ENST00000502714 SCAPERQ9BY12 1400 aa18.47■□□□□ 0.55
YIPF3-210ENST00000502714 PPARGC1BQ86YN6 1023 aaKnown RBP18.46■□□□□ 0.55
YIPF3-210ENST00000502714 KIAA1107Q9UPP5 1409 aa18.45■□□□□ 0.54
YIPF3-210ENST00000502714 COL17A1Q9UMD9 1497 aaPredicted RBP18.45■□□□□ 0.54
YIPF3-210ENST00000502714 ABCC1P33527 1531 aa18.44■□□□□ 0.54
YIPF3-210ENST00000502714 SAMD9LQ8IVG5 1584 aa18.44■□□□□ 0.54
YIPF3-210ENST00000502714 FGD6Q6ZV73 1430 aa18.43■□□□□ 0.54
YIPF3-210ENST00000502714 POGZQ7Z3K3 1410 aa18.42■□□□□ 0.54
YIPF3-210ENST00000502714 CAMSAP2Q08AD1 1489 aa18.42■□□□□ 0.54
YIPF3-210ENST00000502714 ZNF518AQ6AHZ1 1483 aa18.42■□□□□ 0.54
YIPF3-210ENST00000502714 RAPGEF3O95398 923 aa18.41■□□□□ 0.54
YIPF3-210ENST00000502714 SYCP2Q9BX26 1530 aa18.4■□□□□ 0.54
YIPF3-210ENST00000502714 ZNF644Q9H582 1327 aaPredicted RBP18.4■□□□□ 0.54
YIPF3-210ENST00000502714 RSPH4AQ5TD94 716 aa18.38■□□□□ 0.53
YIPF3-210ENST00000502714 ARHGEF12Q9NZN5 1544 aa18.38■□□□□ 0.53
YIPF3-210ENST00000502714 PTPN23Q9H3S7 1636 aa18.38■□□□□ 0.53
YIPF3-210ENST00000502714 RICTORQ6R327 1708 aa18.37■□□□□ 0.53
YIPF3-210ENST00000502714 HNRNPMP52272 730 aaKnown RBP eCLIP18.37■□□□□ 0.53
YIPF3-210ENST00000502714 FRMPD1Q5SYB0 1578 aa18.37■□□□□ 0.53
YIPF3-210ENST00000502714 TCOF1Q13428 1488 aaKnown RBP18.36■□□□□ 0.53
YIPF3-210ENST00000502714 ZMYM4Q5VZL5 1548 aa18.36■□□□□ 0.53
YIPF3-210ENST00000502714 TRAPPC8Q9Y2L5 1435 aa18.36■□□□□ 0.53
YIPF3-210ENST00000502714 MBD5Q9P267 1494 aa18.35■□□□□ 0.53
YIPF3-210ENST00000502714 AFAP1Q8N556 730 aa18.35■□□□□ 0.53
YIPF3-210ENST00000502714 KDM5CP41229 1560 aa18.34■□□□□ 0.53
YIPF3-210ENST00000502714 MAGI2Q86UL8 1455 aa18.34■□□□□ 0.53
YIPF3-210ENST00000502714 ARHGEF5Q12774 1597 aa18.34■□□□□ 0.53
YIPF3-210ENST00000502714 CCDC141Q6ZP82 1450 aa18.33■□□□□ 0.53
YIPF3-210ENST00000502714 FAM50AQ14320 339 aaKnown RBP18.32■□□□□ 0.52
YIPF3-210ENST00000502714 MYT1LQ9UL68 1186 aa18.32■□□□□ 0.52
YIPF3-210ENST00000502714 SPAG9O60271 1321 aaKnown RBP18.31■□□□□ 0.52
YIPF3-210ENST00000502714 HECW2Q9P2P5 1572 aa18.31■□□□□ 0.52
YIPF3-210ENST00000502714 TSPY4P0CV99 314 aa18.3■□□□□ 0.52
YIPF3-210ENST00000502714 TSPY10P0CW01 314 aa18.3■□□□□ 0.52
YIPF3-210ENST00000502714 MLH3Q9UHC1 1453 aa18.3■□□□□ 0.52
YIPF3-210ENST00000502714 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.3■□□□□ 0.52
YIPF3-210ENST00000502714 ZFYVE16Q7Z3T8 1539 aa18.29■□□□□ 0.52
YIPF3-210ENST00000502714 RRBP1Q9P2E9 1410 aaKnown RBP18.29■□□□□ 0.52
YIPF3-210ENST00000502714 ARHGEF40Q8TER5 1519 aa18.28■□□□□ 0.52
YIPF3-210ENST00000502714 RTEL1-TNFRSF6BF6WH68 1400 aa18.26■□□□□ 0.51
YIPF3-210ENST00000502714 DNMT1P26358 1616 aaKnown RBP18.26■□□□□ 0.51
YIPF3-210ENST00000502714 DAPK1P53355 1430 aa18.25■□□□□ 0.51
YIPF3-210ENST00000502714 ATP7AQ04656 1500 aa18.25■□□□□ 0.51
YIPF3-210ENST00000502714 SHANK2Q9UPX8 1470 aa18.25■□□□□ 0.51
YIPF3-210ENST00000502714 INO80Q9ULG1 1556 aaPredicted RBP18.25■□□□□ 0.51
YIPF3-210ENST00000502714 YEATS2Q9ULM3 1422 aa18.24■□□□□ 0.51
YIPF3-210ENST00000502714 ABCC5O15440 1437 aa18.23■□□□□ 0.51
YIPF3-210ENST00000502714 C9orf84Q5VXU9 1444 aa18.23■□□□□ 0.51
YIPF3-210ENST00000502714 MAST1Q9Y2H9 1570 aa18.22■□□□□ 0.51
YIPF3-210ENST00000502714 ATP10AO60312 1499 aa18.21■□□□□ 0.51
YIPF3-210ENST00000502714 KIDINS220Q9ULH0 1771 aa18.21■□□□□ 0.51
YIPF3-210ENST00000502714 CROCC2H7BZ55 1655 aa18.21■□□□□ 0.51
YIPF3-210ENST00000502714 DIP2CQ9Y2E4 1556 aa18.2■□□□□ 0.5
YIPF3-210ENST00000502714 ABCA6Q8N139 1617 aa18.19■□□□□ 0.5
YIPF3-210ENST00000502714 REREQ9P2R6 1566 aa18.17■□□□□ 0.5
YIPF3-210ENST00000502714 ANKRD30AQ9BXX3 1397 aa18.17■□□□□ 0.5
YIPF3-210ENST00000502714 ITGAEP38570 1179 aa18.16■□□□□ 0.5
YIPF3-210ENST00000502714 PLXNC1O60486 1568 aa18.16■□□□□ 0.5
YIPF3-210ENST00000502714 CHIC2Q9UKJ5 165 aa18.15■□□□□ 0.5
YIPF3-210ENST00000502714 ARID4BQ4LE39 1312 aaPredicted RBP18.15■□□□□ 0.5
YIPF3-210ENST00000502714 ADGBQ8N7X0 1667 aa18.15■□□□□ 0.5
YIPF3-210ENST00000502714 ADGRL2O95490 1459 aa18.14■□□□□ 0.5
YIPF3-210ENST00000502714 A2MP01023 1474 aa18.14■□□□□ 0.5
YIPF3-210ENST00000502714 KIF15Q9NS87 1388 aa18.13■□□□□ 0.49
YIPF3-210ENST00000502714 ROCK1Q13464 1354 aa18.12■□□□□ 0.49
YIPF3-210ENST00000502714 DHX29Q7Z478 1369 aaKnown RBP18.12■□□□□ 0.49
YIPF3-210ENST00000502714 NCOA1Q15788 1441 aa18.12■□□□□ 0.49
YIPF3-210ENST00000502714 PTPRKQ15262 1439 aa18.11■□□□□ 0.49
YIPF3-210ENST00000502714 AGLP35573 1532 aa18.11■□□□□ 0.49
YIPF3-210ENST00000502714 DUOX2Q9NRD8 1548 aa18.1■□□□□ 0.49
YIPF3-210ENST00000502714 RRP7BPQ9NSQ0 103 aa18.1■□□□□ 0.49
YIPF3-210ENST00000502714 ERBINQ96RT1 1412 aa18.06■□□□□ 0.48
YIPF3-210ENST00000502714 SIGLEC1Q9BZZ2 1709 aa18.04■□□□□ 0.48
YIPF3-210ENST00000502714 EIF2AK4Q9P2K8 1649 aaKnown RBP18.03■□□□□ 0.48
YIPF3-210ENST00000502714 KIF3BO15066 747 aa18.03■□□□□ 0.48
YIPF3-210ENST00000502714 MLECQ14165 292 aa18.03■□□□□ 0.48
YIPF3-210ENST00000502714 ANKRD50Q9ULJ7 1429 aa18.03■□□□□ 0.48
YIPF3-210ENST00000502714 BCORL1Q5H9F3 1711 aa18.01■□□□□ 0.47
YIPF3-210ENST00000502714 HFM1A2PYH4 1435 aa18■□□□□ 0.47
YIPF3-210ENST00000502714 GGT6Q6P531 493 aa17.99■□□□□ 0.47
YIPF3-210ENST00000502714 ESF1Q9H501 851 aaKnown RBP17.99■□□□□ 0.47
YIPF3-210ENST00000502714 PPP6R1Q9UPN7 881 aa17.99■□□□□ 0.47
YIPF3-210ENST00000502714 NAIPQ13075 1403 aa17.98■□□□□ 0.47
YIPF3-210ENST00000502714 RNF17Q9BXT8 1623 aaKnown RBP17.97■□□□□ 0.47
YIPF3-210ENST00000502714 ADAMTSL3P82987 1691 aa17.96■□□□□ 0.47
YIPF3-210ENST00000502714 TRIM26Q12899 539 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms