RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 PHF8Q9UPP1 1060 aa8.72□□□□□ -1.01
SGMS1-205ENST00000498514 GPR153Q6NV75 609 aa8.69□□□□□ -1.02
SGMS1-205ENST00000498514 ZNF687Q8N1G0 1237 aa8.68□□□□□ -1.02
SGMS1-205ENST00000498514 RNF166Q96A37 237 aaPredicted RBP8.67□□□□□ -1.02
SGMS1-205ENST00000498514 NLRP6P59044 892 aa8.66□□□□□ -1.02
SGMS1-205ENST00000498514 TAOK2Q9UL54 1235 aa8.66□□□□□ -1.02
SGMS1-205ENST00000498514 MYT1LQ9UL68 1186 aa8.65□□□□□ -1.02
SGMS1-205ENST00000498514 ARSIQ5FYB1 569 aa8.64□□□□□ -1.03
SGMS1-205ENST00000498514 BCL11BQ9C0K0 894 aaPredicted RBP8.62□□□□□ -1.03
SGMS1-205ENST00000498514 FBXO22Q8NEZ5 403 aa8.61□□□□□ -1.03
SGMS1-205ENST00000498514 PTGER2P43116 358 aa8.6□□□□□ -1.03
SGMS1-205ENST00000498514 STK24Q9Y6E0 443 aa8.6□□□□□ -1.03
SGMS1-205ENST00000498514 ZNF316A6NFI3 1004 aaPredicted RBP8.58□□□□□ -1.04
SGMS1-205ENST00000498514 ANKRD13DQ6ZTN6 518 aa8.58□□□□□ -1.04
SGMS1-205ENST00000498514 KHSRPQ92945 711 aaKnown RBP eCLIP8.58□□□□□ -1.04
SGMS1-205ENST00000498514 MFRPQ9BY79 579 aa8.57□□□□□ -1.04
SGMS1-205ENST00000498514 STK25O00506 426 aa8.56□□□□□ -1.04
SGMS1-205ENST00000498514 C2orf72A6NCS6 295 aa8.54□□□□□ -1.04
SGMS1-205ENST00000498514 KIF3CO14782 793 aa8.54□□□□□ -1.04
SGMS1-205ENST00000498514 LSM11P83369 360 aaKnown RBP eCLIP8.53□□□□□ -1.04
SGMS1-205ENST00000498514 ECM2O94769 699 aaPredicted RBP8.52□□□□□ -1.05
SGMS1-205ENST00000498514 NUDT7P0C024 238 aa8.51□□□□□ -1.05
SGMS1-205ENST00000498514 PBX2P40425 430 aa8.5□□□□□ -1.05
SGMS1-205ENST00000498514 SLC34A2O95436 690 aa8.49□□□□□ -1.05
SGMS1-205ENST00000498514 TMC2Q8TDI7 906 aa8.49□□□□□ -1.05
SGMS1-205ENST00000498514 LHX6Q9UPM6 363 aa8.48□□□□□ -1.05
SGMS1-205ENST00000498514 PCDHGA4Q9Y5G9 962 aa8.48□□□□□ -1.05
SGMS1-205ENST00000498514 AXIN2Q9Y2T1 843 aa8.45□□□□□ -1.06
SGMS1-205ENST00000498514 RGL2O15211 777 aa8.43□□□□□ -1.06
SGMS1-205ENST00000498514 POTEEQ6S8J3 1075 aa8.43□□□□□ -1.06
SGMS1-205ENST00000498514 PKD2Q13563 968 aa8.42□□□□□ -1.06
SGMS1-205ENST00000498514 PSDA5PKW4 1024 aaPredicted RBP8.41□□□□□ -1.06
SGMS1-205ENST00000498514 ARHGAP33O14559 1287 aa8.39□□□□□ -1.07
SGMS1-205ENST00000498514 PPP1R37O75864 691 aa8.39□□□□□ -1.07
SGMS1-205ENST00000498514 ADGRD1Q6QNK2 874 aa8.38□□□□□ -1.07
SGMS1-205ENST00000498514 HCSTQ9UBK5 93 aa8.38□□□□□ -1.07
SGMS1-205ENST00000498514 PTCD2Q8WV60 388 aaKnown RBP8.37□□□□□ -1.07
SGMS1-205ENST00000498514 PLA2G2EQ9NZK7 142 aa8.36□□□□□ -1.07
SGMS1-205ENST00000498514 KDM4FA0A1W2PPD8 638 aa8.35□□□□□ -1.07
SGMS1-205ENST00000498514 FOXK1P85037 733 aa8.34□□□□□ -1.07
SGMS1-205ENST00000498514 TK2O00142 265 aa8.33□□□□□ -1.08
SGMS1-205ENST00000498514 PLPP6Q8IY26 295 aa8.33□□□□□ -1.08
SGMS1-205ENST00000498514 TBC1D12O60347 775 aa8.32□□□□□ -1.08
SGMS1-205ENST00000498514 PSEN2P49810 448 aa8.32□□□□□ -1.08
SGMS1-205ENST00000498514 GPHNQ9NQX3 736 aaPredicted RBP8.32□□□□□ -1.08
SGMS1-205ENST00000498514 PPP4R3BQ5MIZ7 849 aa8.31□□□□□ -1.08
SGMS1-205ENST00000498514 HRO43593 1189 aa8.3□□□□□ -1.08
SGMS1-205ENST00000498514 DMRTA1Q5VZB9 504 aa8.3□□□□□ -1.08
SGMS1-205ENST00000498514 STAC3Q96MF2 364 aa8.29□□□□□ -1.08
SGMS1-205ENST00000498514 DSG2Q14126 1118 aa8.28□□□□□ -1.08
SGMS1-205ENST00000498514 HS6ST3Q8IZP7 471 aa8.28□□□□□ -1.08
SGMS1-205ENST00000498514 KCNH8Q96L42 1107 aa8.26□□□□□ -1.09
SGMS1-205ENST00000498514 KCTD12Q96CX2 325 aaKnown RBP8.25□□□□□ -1.09
SGMS1-205ENST00000498514 KCNK17Q96T54 332 aa8.24□□□□□ -1.09
SGMS1-205ENST00000498514 CHGAP10645 457 aaKnown RBP8.21□□□□□ -1.1
SGMS1-205ENST00000498514 OXER1Q8TDS5 423 aa8.21□□□□□ -1.1
SGMS1-205ENST00000498514 UPF1Q92900 1129 aaKnown RBP eCLIP8.2□□□□□ -1.1
SGMS1-205ENST00000498514 VPS9D1Q9Y2B5 631 aa8.2□□□□□ -1.1
SGMS1-205ENST00000498514 ZNF454Q8N9F8 522 aa8.19□□□□□ -1.1
SGMS1-205ENST00000498514 RYDENQ9NUL5 291 aaKnown RBP8.18□□□□□ -1.1
SGMS1-205ENST00000498514 PTPN5P54829 565 aa8.17□□□□□ -1.1
SGMS1-205ENST00000498514 SLC4A5Q9BY07 1137 aa8.17□□□□□ -1.1
SGMS1-205ENST00000498514 BCL2L12Q9HB09 334 aa8.17□□□□□ -1.1
SGMS1-205ENST00000498514 CRISPLD2Q9H0B8 497 aa8.16□□□□□ -1.1
SGMS1-205ENST00000498514 DNAJC5Q9H3Z4 198 aa8.16□□□□□ -1.1
SGMS1-205ENST00000498514 PPP1R15BQ5SWA1 713 aa8.15□□□□□ -1.1
SGMS1-205ENST00000498514 PTPREP23469 700 aa8.14□□□□□ -1.11
SGMS1-205ENST00000498514 FOSBP53539 338 aa8.14□□□□□ -1.11
SGMS1-205ENST00000498514 NKX1-1Q15270 411 aaPredicted RBP8.14□□□□□ -1.11
SGMS1-205ENST00000498514 GOLGA8CPA6NN73 597 aa8.13□□□□□ -1.11
SGMS1-205ENST00000498514 PDE4AP27815 886 aa8.13□□□□□ -1.11
SGMS1-205ENST00000498514 BHMG1C9JSJ3 638 aaPredicted RBP8.12□□□□□ -1.11
SGMS1-205ENST00000498514 ANO8Q9HCE9 1232 aaPredicted RBP8.12□□□□□ -1.11
SGMS1-205ENST00000498514 IFFO2Q5TF58 517 aa8.11□□□□□ -1.11
SGMS1-205ENST00000498514 THSD4Q6ZMP0 1018 aa8.11□□□□□ -1.11
SGMS1-205ENST00000498514 MRPL50Q8N5N7 158 aaKnown RBP8.11□□□□□ -1.11
SGMS1-205ENST00000498514 ZBED2Q9BTP6 218 aa8.11□□□□□ -1.11
SGMS1-205ENST00000498514 EVI5O60447 810 aa8.1□□□□□ -1.11
SGMS1-205ENST00000498514 RGS20O76081 388 aa8.1□□□□□ -1.11
SGMS1-205ENST00000498514 WNT2BQ93097 391 aa8.1□□□□□ -1.11
SGMS1-205ENST00000498514 JPH4Q96JJ6 628 aa8.1□□□□□ -1.11
SGMS1-205ENST00000498514 NCKAP5LQ9HCH0 1330 aa8.09□□□□□ -1.11
SGMS1-205ENST00000498514 ZDHHC16Q969W1 377 aa8.09□□□□□ -1.11
SGMS1-205ENST00000498514 ADAM33Q9BZ11 813 aa8.07□□□□□ -1.12
SGMS1-205ENST00000498514 NBPF3Q9H094 633 aa8.07□□□□□ -1.12
SGMS1-205ENST00000498514 MAP3K9P80192 1104 aa8.06□□□□□ -1.12
SGMS1-205ENST00000498514 DDX27Q96GQ7 796 aaKnown RBP8.05□□□□□ -1.12
SGMS1-205ENST00000498514 LARP6Q9BRS8 491 aaKnown RBP8.05□□□□□ -1.12
SGMS1-205ENST00000498514 A0A0G2JS52 829 aa8.04□□□□□ -1.12
SGMS1-205ENST00000498514 GTPBP6O43824 516 aaPredicted RBP8.02□□□□□ -1.13
SGMS1-205ENST00000498514 PPP1R3GB7ZBB8 358 aa8.01□□□□□ -1.13
SGMS1-205ENST00000498514 IRX2Q9BZI1 471 aaPredicted RBP8.01□□□□□ -1.13
SGMS1-205ENST00000498514 MFSD10Q14728 455 aa8□□□□□ -1.13
SGMS1-205ENST00000498514 RABGEF1Q9UJ41 708 aa8□□□□□ -1.13
SGMS1-205ENST00000498514 PCDHGA10Q9Y5H3 936 aa8□□□□□ -1.13
SGMS1-205ENST00000498514 ANKK1Q8NFD2 765 aa7.99□□□□□ -1.13
SGMS1-205ENST00000498514 FBXW7Q969H0 707 aa7.98□□□□□ -1.13
SGMS1-205ENST00000498514 EMILIN3Q9NT22 766 aa7.98□□□□□ -1.13
SGMS1-205ENST00000498514 COL9A1P20849 921 aa7.97□□□□□ -1.13
SGMS1-205ENST00000498514 PROX2Q3B8N5 592 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms