RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 ADGRL1O94910 1474 aa17.69■□□□□ 0.42
CTTN-208ENST00000498223 PREX2Q70Z35 1606 aa17.68■□□□□ 0.42
CTTN-208ENST00000498223 ARHGAP5Q13017 1502 aa17.67■□□□□ 0.42
CTTN-208ENST00000498223 PHLDB1Q86UU1 1377 aa17.66■□□□□ 0.42
CTTN-208ENST00000498223 ARAP3Q8WWN8 1544 aa17.65■□□□□ 0.42
CTTN-208ENST00000498223 CFAP74Q9C0B2 1584 aa17.65■□□□□ 0.42
CTTN-208ENST00000498223 ZNF777Q9ULD5 760 aaPredicted RBP17.64■□□□□ 0.41
CTTN-208ENST00000498223 PLCH2O75038 1416 aa17.64■□□□□ 0.41
CTTN-208ENST00000498223 CFDP1Q9UEE9 299 aaPredicted RBP17.63■□□□□ 0.41
CTTN-208ENST00000498223 GPATCH8Q9UKJ3 1502 aaKnown RBP17.62■□□□□ 0.41
CTTN-208ENST00000498223 EFCAB2Q5VUJ9 269 aa17.62■□□□□ 0.41
CTTN-208ENST00000498223 FANCAO15360 1455 aa17.62■□□□□ 0.41
CTTN-208ENST00000498223 NEO1Q92859 1461 aa17.61■□□□□ 0.41
CTTN-208ENST00000498223 MYOM3Q5VTT5 1437 aa17.59■□□□□ 0.41
CTTN-208ENST00000498223 AKNAQ7Z591 1439 aa17.55■□□□□ 0.4
CTTN-208ENST00000498223 PTPN23Q9H3S7 1636 aa17.54■□□□□ 0.4
CTTN-208ENST00000498223 SAMD9LQ8IVG5 1584 aa17.54■□□□□ 0.4
CTTN-208ENST00000498223 RAPGEF3O95398 923 aa17.54■□□□□ 0.4
CTTN-208ENST00000498223 FGD6Q6ZV73 1430 aa17.53■□□□□ 0.4
CTTN-208ENST00000498223 MIA2Q96PC5 1412 aa17.53■□□□□ 0.4
CTTN-208ENST00000498223 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.4
CTTN-208ENST00000498223 ZNF644Q9H582 1327 aaPredicted RBP17.51■□□□□ 0.39
CTTN-208ENST00000498223 CAMSAP2Q08AD1 1489 aa17.51■□□□□ 0.39
CTTN-208ENST00000498223 PLEKHH2Q8IVE3 1493 aa17.51■□□□□ 0.39
CTTN-208ENST00000498223 SCAPERQ9BY12 1400 aa17.5■□□□□ 0.39
CTTN-208ENST00000498223 ABCC1P33527 1531 aa17.5■□□□□ 0.39
CTTN-208ENST00000498223 SYCP2Q9BX26 1530 aa17.49■□□□□ 0.39
CTTN-208ENST00000498223 HNRNPMP52272 730 aaKnown RBP eCLIP17.49■□□□□ 0.395e-8■■■■■ 27.1
CTTN-208ENST00000498223 FRMPD1Q5SYB0 1578 aa17.48■□□□□ 0.39
CTTN-208ENST00000498223 MYT1LQ9UL68 1186 aa17.47■□□□□ 0.39
CTTN-208ENST00000498223 DENND4BO75064 1496 aaPredicted RBP17.47■□□□□ 0.39
CTTN-208ENST00000498223 RICTORQ6R327 1708 aa17.47■□□□□ 0.39
CTTN-208ENST00000498223 TCOF1Q13428 1488 aaKnown RBP17.44■□□□□ 0.38
CTTN-208ENST00000498223 ARHGEF12Q9NZN5 1544 aa17.43■□□□□ 0.38
CTTN-208ENST00000498223 KIAA1107Q9UPP5 1409 aa17.43■□□□□ 0.38
CTTN-208ENST00000498223 TRAPPC8Q9Y2L5 1435 aa17.42■□□□□ 0.38
CTTN-208ENST00000498223 ITGAEP38570 1179 aa17.42■□□□□ 0.38
CTTN-208ENST00000498223 ZNF518AQ6AHZ1 1483 aa17.42■□□□□ 0.38
CTTN-208ENST00000498223 ARHGEF5Q12774 1597 aa17.41■□□□□ 0.38
CTTN-208ENST00000498223 HECW2Q9P2P5 1572 aa17.41■□□□□ 0.38
CTTN-208ENST00000498223 POGZQ7Z3K3 1410 aa17.41■□□□□ 0.38
CTTN-208ENST00000498223 RRBP1Q9P2E9 1410 aaKnown RBP17.41■□□□□ 0.38
CTTN-208ENST00000498223 AFAP1Q8N556 730 aa17.41■□□□□ 0.38
CTTN-208ENST00000498223 CROCC2H7BZ55 1655 aa17.41■□□□□ 0.38
CTTN-208ENST00000498223 ARHGEF40Q8TER5 1519 aa17.41■□□□□ 0.38
CTTN-208ENST00000498223 DNMT1P26358 1616 aaKnown RBP17.4■□□□□ 0.38
CTTN-208ENST00000498223 CCDC141Q6ZP82 1450 aa17.4■□□□□ 0.38
CTTN-208ENST00000498223 RSPH4AQ5TD94 716 aa17.4■□□□□ 0.38
CTTN-208ENST00000498223 TSPY4P0CV99 314 aa17.39■□□□□ 0.37
CTTN-208ENST00000498223 TSPY10P0CW01 314 aa17.39■□□□□ 0.37
CTTN-208ENST00000498223 ARID4BQ4LE39 1312 aaPredicted RBP17.39■□□□□ 0.37
CTTN-208ENST00000498223 ZMYM4Q5VZL5 1548 aa17.38■□□□□ 0.37
CTTN-208ENST00000498223 MAGI2Q86UL8 1455 aa17.37■□□□□ 0.37
CTTN-208ENST00000498223 MBD5Q9P267 1494 aa17.37■□□□□ 0.37
CTTN-208ENST00000498223 ADAMTSL3P82987 1691 aa17.37■□□□□ 0.37
CTTN-208ENST00000498223 SPAG9O60271 1321 aaKnown RBP17.37■□□□□ 0.37
CTTN-208ENST00000498223 PTPRMP28827 1452 aa17.37■□□□□ 0.37
CTTN-208ENST00000498223 DAPK1P53355 1430 aa17.36■□□□□ 0.37
CTTN-208ENST00000498223 KDM5CP41229 1560 aa17.36■□□□□ 0.37
CTTN-208ENST00000498223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.35■□□□□ 0.373e-7■□□□□ 10
CTTN-208ENST00000498223 ADGBQ8N7X0 1667 aa17.35■□□□□ 0.37
CTTN-208ENST00000498223 ZFYVE16Q7Z3T8 1539 aa17.34■□□□□ 0.37
CTTN-208ENST00000498223 CHIC2Q9UKJ5 165 aa17.34■□□□□ 0.37
CTTN-208ENST00000498223 KIDINS220Q9ULH0 1771 aa17.34■□□□□ 0.37
CTTN-208ENST00000498223 BCORL1Q5H9F3 1711 aa17.33■□□□□ 0.37
CTTN-208ENST00000498223 ATP7AQ04656 1500 aa17.33■□□□□ 0.37
CTTN-208ENST00000498223 ABCC5O15440 1437 aa17.33■□□□□ 0.36
CTTN-208ENST00000498223 YEATS2Q9ULM3 1422 aa17.33■□□□□ 0.36
CTTN-208ENST00000498223 INO80Q9ULG1 1556 aaPredicted RBP17.32■□□□□ 0.36
CTTN-208ENST00000498223 C9orf84Q5VXU9 1444 aa17.31■□□□□ 0.36
CTTN-208ENST00000498223 MAST1Q9Y2H9 1570 aa17.31■□□□□ 0.36
CTTN-208ENST00000498223 MLH3Q9UHC1 1453 aa17.3■□□□□ 0.36
CTTN-208ENST00000498223 SHANK2Q9UPX8 1470 aa17.3■□□□□ 0.36
CTTN-208ENST00000498223 MADDQ8WXG6 1647 aa17.29■□□□□ 0.36
CTTN-208ENST00000498223 ABCA6Q8N139 1617 aa17.29■□□□□ 0.36
CTTN-208ENST00000498223 RTEL1-TNFRSF6BF6WH68 1400 aa17.28■□□□□ 0.36
CTTN-208ENST00000498223 ANKRD30AQ9BXX3 1397 aa17.27■□□□□ 0.35
CTTN-208ENST00000498223 DIP2CQ9Y2E4 1556 aa17.26■□□□□ 0.35
CTTN-208ENST00000498223 ATP10AO60312 1499 aa17.25■□□□□ 0.35
CTTN-208ENST00000498223 PLXNC1O60486 1568 aa17.25■□□□□ 0.35
CTTN-208ENST00000498223 PTPRKQ15262 1439 aa17.25■□□□□ 0.35
CTTN-208ENST00000498223 TRIM26Q12899 539 aaPredicted RBP17.25■□□□□ 0.35
CTTN-208ENST00000498223 RRP7BPQ9NSQ0 103 aa17.25■□□□□ 0.35
CTTN-208ENST00000498223 ADGRL2O95490 1459 aa17.21■□□□□ 0.35
CTTN-208ENST00000498223 MLECQ14165 292 aa17.21■□□□□ 0.35
CTTN-208ENST00000498223 SIGLEC1Q9BZZ2 1709 aa17.21■□□□□ 0.35
CTTN-208ENST00000498223 RIMS1Q86UR5 1692 aaKnown RBP17.2■□□□□ 0.34
CTTN-208ENST00000498223 A2MP01023 1474 aa17.2■□□□□ 0.34
CTTN-208ENST00000498223 KIF15Q9NS87 1388 aa17.2■□□□□ 0.34
CTTN-208ENST00000498223 ILDR1Q86SU0 546 aaPredicted RBP17.2■□□□□ 0.34
CTTN-208ENST00000498223 NCOA1Q15788 1441 aa17.2■□□□□ 0.34
CTTN-208ENST00000498223 LMTK3Q96Q04 1460 aa17.19■□□□□ 0.34
CTTN-208ENST00000498223 ROCK1Q13464 1354 aa17.19■□□□□ 0.34
CTTN-208ENST00000498223 DUOX2Q9NRD8 1548 aa17.19■□□□□ 0.34
CTTN-208ENST00000498223 GCC2Q8IWJ2 1684 aa17.18■□□□□ 0.34
CTTN-208ENST00000498223 DHX29Q7Z478 1369 aaKnown RBP17.16■□□□□ 0.34
CTTN-208ENST00000498223 REREQ9P2R6 1566 aa17.16■□□□□ 0.34
CTTN-208ENST00000498223 KIF3BO15066 747 aa17.14■□□□□ 0.33
CTTN-208ENST00000498223 PLPPR3Q6T4P5 718 aa17.14■□□□□ 0.33
CTTN-208ENST00000498223 EIF2AK4Q9P2K8 1649 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms