RNA–Protein interactions for RNA: ENST00000498122.4

CHEK1-205, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-205ENST00000498122 TEX14Q8IWB6 1497 aa14.04□□□□□ -0.16
CHEK1-205ENST00000498122 TIAM1Q13009 1591 aa14.04□□□□□ -0.16
CHEK1-205ENST00000498122 LRRC9Q6ZRR7 1453 aa14.01□□□□□ -0.17
CHEK1-205ENST00000498122 MAP3K1Q13233 1512 aa14□□□□□ -0.17
CHEK1-205ENST00000498122 FANCAO15360 1455 aa14□□□□□ -0.17
CHEK1-205ENST00000498122 EHBP1L1Q8N3D4 1523 aa14□□□□□ -0.17
CHEK1-205ENST00000498122 GPATCH8Q9UKJ3 1502 aaKnown RBP14□□□□□ -0.17
CHEK1-205ENST00000498122 NEO1Q92859 1461 aa13.99□□□□□ -0.17
CHEK1-205ENST00000498122 AKNAQ7Z591 1439 aa13.98□□□□□ -0.17
CHEK1-205ENST00000498122 KDM6BO15054 1643 aa13.98□□□□□ -0.17
CHEK1-205ENST00000498122 ARAP3Q8WWN8 1544 aa13.97□□□□□ -0.17
CHEK1-205ENST00000498122 RAPGEF3O95398 923 aa13.97□□□□□ -0.17
CHEK1-205ENST00000498122 EFCAB2Q5VUJ9 269 aa13.97□□□□□ -0.17
CHEK1-205ENST00000498122 NCOA2Q15596 1464 aa13.97□□□□□ -0.17
CHEK1-205ENST00000498122 C1QBPQ07021 282 aaKnown RBP13.96□□□□□ -0.17
CHEK1-205ENST00000498122 PHLDB1Q86UU1 1377 aa13.96□□□□□ -0.18
CHEK1-205ENST00000498122 CCNB3Q8WWL7 1395 aa13.95□□□□□ -0.18
CHEK1-205ENST00000498122 ARHGAP5Q13017 1502 aa13.94□□□□□ -0.18
CHEK1-205ENST00000498122 ARHGEF12Q9NZN5 1544 aa13.94□□□□□ -0.18
CHEK1-205ENST00000498122 SCAPERQ9BY12 1400 aa13.93□□□□□ -0.18
CHEK1-205ENST00000498122 ADGRL1O94910 1474 aa13.93□□□□□ -0.18
CHEK1-205ENST00000498122 ZNF644Q9H582 1327 aaPredicted RBP13.92□□□□□ -0.18
CHEK1-205ENST00000498122 FRMPD1Q5SYB0 1578 aa13.92□□□□□ -0.18
CHEK1-205ENST00000498122 APLP2Q06481 763 aa13.92□□□□□ -0.18
CHEK1-205ENST00000498122 PREX2Q70Z35 1606 aa13.92□□□□□ -0.18
CHEK1-205ENST00000498122 MYO5CQ9NQX4 1742 aa13.92□□□□□ -0.18
CHEK1-205ENST00000498122 CDC42BPBQ9Y5S2 1711 aa13.92□□□□□ -0.18
CHEK1-205ENST00000498122 DENND4BO75064 1496 aaPredicted RBP13.92□□□□□ -0.18
CHEK1-205ENST00000498122 CFDP1Q9UEE9 299 aaPredicted RBP13.91□□□□□ -0.18
CHEK1-205ENST00000498122 ZNF777Q9ULD5 760 aaPredicted RBP13.91□□□□□ -0.18
CHEK1-205ENST00000498122 CDC42BPAQ5VT25 1732 aa13.9□□□□□ -0.18
CHEK1-205ENST00000498122 KDM4FA0A1W2PPD8 638 aa13.9□□□□□ -0.18
CHEK1-205ENST00000498122 PPARGC1BQ86YN6 1023 aaKnown RBP13.9□□□□□ -0.18
CHEK1-205ENST00000498122 TRAPPC8Q9Y2L5 1435 aa13.9□□□□□ -0.19
CHEK1-205ENST00000498122 AFAP1Q8N556 730 aa13.89□□□□□ -0.19
CHEK1-205ENST00000498122 POGZQ7Z3K3 1410 aa13.89□□□□□ -0.19
CHEK1-205ENST00000498122 SAMD9LQ8IVG5 1584 aa13.88□□□□□ -0.19
CHEK1-205ENST00000498122 SUPT6HQ7KZ85 1726 aaKnown RBP13.88□□□□□ -0.19
CHEK1-205ENST00000498122 CFAP74Q9C0B2 1584 aa13.88□□□□□ -0.19
CHEK1-205ENST00000498122 ABCC1P33527 1531 aa13.87□□□□□ -0.19
CHEK1-205ENST00000498122 HOXD11P31277 338 aaPredicted RBP13.87□□□□□ -0.19
CHEK1-205ENST00000498122 HNRNPMP52272 730 aaKnown RBP eCLIP13.87□□□□□ -0.19
CHEK1-205ENST00000498122 YEATS2Q9ULM3 1422 aa13.86□□□□□ -0.19
CHEK1-205ENST00000498122 MYOM3Q5VTT5 1437 aa13.85□□□□□ -0.19
CHEK1-205ENST00000498122 MBD5Q9P267 1494 aa13.85□□□□□ -0.19
CHEK1-205ENST00000498122 RICTORQ6R327 1708 aa13.84□□□□□ -0.19
CHEK1-205ENST00000498122 KIAA1107Q9UPP5 1409 aa13.84□□□□□ -0.19
CHEK1-205ENST00000498122 SYCP2Q9BX26 1530 aa13.84□□□□□ -0.19
CHEK1-205ENST00000498122 ZMYM4Q5VZL5 1548 aa13.83□□□□□ -0.2
CHEK1-205ENST00000498122 CAMSAP2Q08AD1 1489 aa13.81□□□□□ -0.2
CHEK1-205ENST00000498122 ZNF518AQ6AHZ1 1483 aa13.81□□□□□ -0.2
CHEK1-205ENST00000498122 KDM5CP41229 1560 aa13.81□□□□□ -0.2
CHEK1-205ENST00000498122 MIA2Q96PC5 1412 aa13.81□□□□□ -0.2
CHEK1-205ENST00000498122 ITSN2Q9NZM3 1697 aa13.8□□□□□ -0.2
CHEK1-205ENST00000498122 PLEKHH2Q8IVE3 1493 aa13.8□□□□□ -0.2
CHEK1-205ENST00000498122 FGD6Q6ZV73 1430 aa13.79□□□□□ -0.2
CHEK1-205ENST00000498122 MAGI2Q86UL8 1455 aa13.78□□□□□ -0.2
CHEK1-205ENST00000498122 MLH3Q9UHC1 1453 aa13.78□□□□□ -0.2
CHEK1-205ENST00000498122 ARHGEF40Q8TER5 1519 aa13.77□□□□□ -0.21
CHEK1-205ENST00000498122 ZFYVE16Q7Z3T8 1539 aa13.76□□□□□ -0.21
CHEK1-205ENST00000498122 SPAG9O60271 1321 aaKnown RBP13.76□□□□□ -0.21
CHEK1-205ENST00000498122 TCOF1Q13428 1488 aaKnown RBP13.75□□□□□ -0.21
CHEK1-205ENST00000498122 CCDC141Q6ZP82 1450 aa13.74□□□□□ -0.21
CHEK1-205ENST00000498122 SIGLEC1Q9BZZ2 1709 aa13.74□□□□□ -0.21
CHEK1-205ENST00000498122 HECW2Q9P2P5 1572 aa13.74□□□□□ -0.21
CHEK1-205ENST00000498122 ATP10AO60312 1499 aa13.74□□□□□ -0.21
CHEK1-205ENST00000498122 ABCC5O15440 1437 aa13.73□□□□□ -0.21
CHEK1-205ENST00000498122 DIP2CQ9Y2E4 1556 aa13.73□□□□□ -0.21
CHEK1-205ENST00000498122 KIDINS220Q9ULH0 1771 aa13.73□□□□□ -0.21
CHEK1-205ENST00000498122 PTPN23Q9H3S7 1636 aa13.72□□□□□ -0.21
CHEK1-205ENST00000498122 ARHGEF5Q12774 1597 aa13.72□□□□□ -0.21
CHEK1-205ENST00000498122 POTEHQ6S545 545 aa13.72□□□□□ -0.21
CHEK1-205ENST00000498122 MYT1LQ9UL68 1186 aa13.72□□□□□ -0.21
CHEK1-205ENST00000498122 ABCA6Q8N139 1617 aa13.72□□□□□ -0.21
CHEK1-205ENST00000498122 ATP7AQ04656 1500 aa13.71□□□□□ -0.21
CHEK1-205ENST00000498122 RSPH4AQ5TD94 716 aa13.71□□□□□ -0.21
CHEK1-205ENST00000498122 INO80Q9ULG1 1556 aaPredicted RBP13.71□□□□□ -0.22
CHEK1-205ENST00000498122 FAM50AQ14320 339 aaKnown RBP13.7□□□□□ -0.22
CHEK1-205ENST00000498122 RTEL1-TNFRSF6BF6WH68 1400 aa13.7□□□□□ -0.22
CHEK1-205ENST00000498122 C9orf84Q5VXU9 1444 aa13.7□□□□□ -0.22
CHEK1-205ENST00000498122 DAPK1P53355 1430 aa13.69□□□□□ -0.22
CHEK1-205ENST00000498122 PTPRKQ15262 1439 aa13.69□□□□□ -0.22
CHEK1-205ENST00000498122 ARID4BQ4LE39 1312 aaPredicted RBP13.68□□□□□ -0.22
CHEK1-205ENST00000498122 TSPY4P0CV99 314 aa13.67□□□□□ -0.22
CHEK1-205ENST00000498122 TSPY10P0CW01 314 aa13.67□□□□□ -0.22
CHEK1-205ENST00000498122 RRBP1Q9P2E9 1410 aaKnown RBP13.66□□□□□ -0.22
CHEK1-205ENST00000498122 MLECQ14165 292 aa13.66□□□□□ -0.22
CHEK1-205ENST00000498122 REREQ9P2R6 1566 aa13.66□□□□□ -0.22
CHEK1-205ENST00000498122 CHIC2Q9UKJ5 165 aa13.65□□□□□ -0.22
CHEK1-205ENST00000498122 A2MP01023 1474 aa13.65□□□□□ -0.22
CHEK1-205ENST00000498122 MAST1Q9Y2H9 1570 aa13.64□□□□□ -0.23
CHEK1-205ENST00000498122 SHANK2Q9UPX8 1470 aa13.64□□□□□ -0.23
CHEK1-205ENST00000498122 DHX29Q7Z478 1369 aaKnown RBP13.64□□□□□ -0.23
CHEK1-205ENST00000498122 ILDR1Q86SU0 546 aaPredicted RBP13.64□□□□□ -0.23
CHEK1-205ENST00000498122 DNMT1P26358 1616 aaKnown RBP13.64□□□□□ -0.23
CHEK1-205ENST00000498122 AGLP35573 1532 aa13.64□□□□□ -0.23
CHEK1-205ENST00000498122 PLXNC1O60486 1568 aa13.63□□□□□ -0.23
CHEK1-205ENST00000498122 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.62□□□□□ -0.23
CHEK1-205ENST00000498122 ADAMTSL3P82987 1691 aa13.61□□□□□ -0.23
CHEK1-205ENST00000498122 RRP7BPQ9NSQ0 103 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms