RNA–Protein interactions for RNA: ENST00000497886.5

TSC2-216, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 3,248 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-216ENST00000497886 KIF7Q2M1P5 1343 aa18.61■□□□□ 0.57
TSC2-216ENST00000497886 CCDC7Q96M83 1385 aa18.61■□□□□ 0.57
TSC2-216ENST00000497886 LAMC3Q9Y6N6 1575 aa18.6■□□□□ 0.57
TSC2-216ENST00000497886 DENND4BO75064 1496 aaPredicted RBP18.6■□□□□ 0.57
TSC2-216ENST00000497886 THOC2Q8NI27 1593 aaKnown RBP18.6■□□□□ 0.57
TSC2-216ENST00000497886 SAMD9Q5K651 1589 aa18.6■□□□□ 0.57
TSC2-216ENST00000497886 CNTLNQ9NXG0 1405 aa18.59■□□□□ 0.57
TSC2-216ENST00000497886 KDM5BQ9UGL1 1544 aa18.59■□□□□ 0.57
TSC2-216ENST00000497886 ABCA5Q8WWZ7 1642 aa18.57■□□□□ 0.56
TSC2-216ENST00000497886 PKD2Q13563 968 aa18.57■□□□□ 0.56
TSC2-216ENST00000497886 PPP4R2Q9NY27 417 aa18.55■□□□□ 0.56
TSC2-216ENST00000497886 KIF21AQ7Z4S6 1674 aa18.55■□□□□ 0.56
TSC2-216ENST00000497886 CHMP7Q8WUX9 453 aaPredicted RBP18.52■□□□□ 0.56
TSC2-216ENST00000497886 ZNF608Q9ULD9 1512 aaPredicted RBP18.51■□□□□ 0.55
TSC2-216ENST00000497886 HECW1Q76N89 1606 aa18.51■□□□□ 0.55
TSC2-216ENST00000497886 IQGAP2Q13576 1575 aa18.51■□□□□ 0.55
TSC2-216ENST00000497886 DAPK1P53355 1430 aa18.51■□□□□ 0.55
TSC2-216ENST00000497886 PRG4Q92954 1404 aaPredicted RBP18.5■□□□□ 0.55
TSC2-216ENST00000497886 ANKRD30BQ9BXX2 1392 aa18.5■□□□□ 0.55
TSC2-216ENST00000497886 TMC1Q8TDI8 760 aa18.49■□□□□ 0.55
TSC2-216ENST00000497886 ABCC5O15440 1437 aa18.49■□□□□ 0.55
TSC2-216ENST00000497886 AKNAQ7Z591 1439 aa18.48■□□□□ 0.55
TSC2-216ENST00000497886 RGL3Q3MIN7 710 aa18.48■□□□□ 0.55
TSC2-216ENST00000497886 NBR1Q14596 966 aa18.47■□□□□ 0.55
TSC2-216ENST00000497886 CARD11Q9BXL7 1154 aa18.47■□□□□ 0.55
TSC2-216ENST00000497886 NCOA1Q15788 1441 aa18.47■□□□□ 0.55
TSC2-216ENST00000497886 CCDC136Q96JN2 1154 aa18.45■□□□□ 0.54
TSC2-216ENST00000497886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.45■□□□□ 0.549e-6■□□□□ 10.7
TSC2-216ENST00000497886 ZBED9Q6R2W3 1325 aa18.45■□□□□ 0.54
TSC2-216ENST00000497886 DCAF11Q8TEB1 546 aa18.44■□□□□ 0.54
TSC2-216ENST00000497886 TCOF1Q13428 1488 aaKnown RBP18.44■□□□□ 0.54
TSC2-216ENST00000497886 USP47Q96K76 1375 aa18.44■□□□□ 0.54
TSC2-216ENST00000497886 MIA2Q96PC5 1412 aa18.43■□□□□ 0.54
TSC2-216ENST00000497886 ARHGEF11O15085 1522 aa18.42■□□□□ 0.54
TSC2-216ENST00000497886 RPRD2Q5VT52 1461 aaKnown RBP18.41■□□□□ 0.54
TSC2-216ENST00000497886 GCC2Q8IWJ2 1684 aa18.41■□□□□ 0.54
TSC2-216ENST00000497886 HNRNPMP52272 730 aaKnown RBP eCLIP18.41■□□□□ 0.54
TSC2-216ENST00000497886 TARBP1Q13395 1621 aaKnown RBP18.41■□□□□ 0.54
TSC2-216ENST00000497886 ST20-MTHFSA0A0A6YYL1 179 aa18.4■□□□□ 0.54
TSC2-216ENST00000497886 WDR62O43379 1518 aa18.4■□□□□ 0.54
TSC2-216ENST00000497886 NUP155O75694 1391 aa18.4■□□□□ 0.54
TSC2-216ENST00000497886 PLB1Q6P1J6 1458 aa18.4■□□□□ 0.54
TSC2-216ENST00000497886 NPM2Q86SE8 214 aaKnown RBP18.4■□□□□ 0.54
TSC2-216ENST00000497886 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
TSC2-216ENST00000497886 NUP153P49790 1475 aaKnown RBP18.38■□□□□ 0.53
TSC2-216ENST00000497886 PLEKHD1A6NEE1 506 aa18.37■□□□□ 0.53
TSC2-216ENST00000497886 TSPY4P0CV99 314 aa18.36■□□□□ 0.53
TSC2-216ENST00000497886 TSPY10P0CW01 314 aa18.36■□□□□ 0.53
TSC2-216ENST00000497886 TEX14Q8IWB6 1497 aa18.36■□□□□ 0.53
TSC2-216ENST00000497886 ADAMTS12P58397 1594 aa18.34■□□□□ 0.53
TSC2-216ENST00000497886 FANCIQ9NVI1 1328 aa18.34■□□□□ 0.53
TSC2-216ENST00000497886 NUDCQ9Y266 331 aa18.34■□□□□ 0.53
TSC2-216ENST00000497886 JPH4Q96JJ6 628 aa18.33■□□□□ 0.52
TSC2-216ENST00000497886 CC2D1BQ5T0F9 858 aaKnown RBP18.32■□□□□ 0.52
TSC2-216ENST00000497886 CAMSAP2Q08AD1 1489 aa18.32■□□□□ 0.52
TSC2-216ENST00000497886 PAK3O75914 559 aaPredicted RBP18.31■□□□□ 0.52
TSC2-216ENST00000497886 DISP1Q96F81 1524 aa18.31■□□□□ 0.52
TSC2-216ENST00000497886 ROCK1Q13464 1354 aa18.3■□□□□ 0.52
TSC2-216ENST00000497886 ANKRD30AQ9BXX3 1397 aa18.3■□□□□ 0.52
TSC2-216ENST00000497886 PZPP20742 1482 aa18.3■□□□□ 0.52
TSC2-216ENST00000497886 MRC2Q9UBG0 1479 aa18.3■□□□□ 0.52
TSC2-216ENST00000497886 SPATA31E1Q6ZUB1 1445 aa18.29■□□□□ 0.52
TSC2-216ENST00000497886 ANKRD50Q9ULJ7 1429 aa18.29■□□□□ 0.52
TSC2-216ENST00000497886 PRKCSHP14314 528 aaPredicted RBP18.28■□□□□ 0.52
TSC2-216ENST00000497886 KIAA1107Q9UPP5 1409 aa18.27■□□□□ 0.52
TSC2-216ENST00000497886 DHX29Q7Z478 1369 aaKnown RBP18.27■□□□□ 0.52
TSC2-216ENST00000497886 TROQ12816 1431 aaPredicted RBP18.27■□□□□ 0.52
TSC2-216ENST00000497886 DNMT1P26358 1616 aaKnown RBP18.27■□□□□ 0.51
TSC2-216ENST00000497886 ERCC6Q03468 1493 aa18.27■□□□□ 0.51
TSC2-216ENST00000497886 KIAA0586Q9BVV6 1533 aa18.27■□□□□ 0.51
TSC2-216ENST00000497886 PNISRQ8TF01 805 aaKnown RBP18.27■□□□□ 0.51
TSC2-216ENST00000497886 KIAA0556O60303 1618 aa18.26■□□□□ 0.51
TSC2-216ENST00000497886 NBPF1Q3BBV0 1214 aa18.25■□□□□ 0.51
TSC2-216ENST00000497886 ERICH6BQ5W0A0 696 aa18.25■□□□□ 0.51
TSC2-216ENST00000497886 SKAP1Q86WV1 359 aa18.25■□□□□ 0.51
TSC2-216ENST00000497886 KIF14Q15058 1648 aa18.25■□□□□ 0.51
TSC2-216ENST00000497886 RAPGEF6Q8TEU7 1601 aa18.25■□□□□ 0.51
TSC2-216ENST00000497886 GPATCH8Q9UKJ3 1502 aaKnown RBP18.25■□□□□ 0.51
TSC2-216ENST00000497886 ROCK2O75116 1388 aaKnown RBP18.25■□□□□ 0.51
TSC2-216ENST00000497886 PLIN1O60240 522 aa18.24■□□□□ 0.51
TSC2-216ENST00000497886 EXOC6Q8TAG9 804 aa18.24■□□□□ 0.51
TSC2-216ENST00000497886 NOP58Q9Y2X3 529 aaKnown RBP18.24■□□□□ 0.51
TSC2-216ENST00000497886 GRIN2AQ12879 1464 aa18.23■□□□□ 0.51
TSC2-216ENST00000497886 BCORL1Q5H9F3 1711 aa18.23■□□□□ 0.51
TSC2-216ENST00000497886 ANP32AP39687 249 aaKnown RBP18.22■□□□□ 0.51
TSC2-216ENST00000497886 CDCA7LQ96GN5 454 aa18.22■□□□□ 0.51
TSC2-216ENST00000497886 IFT140Q96RY7 1462 aa18.18■□□□□ 0.5
TSC2-216ENST00000497886 KIF15Q9NS87 1388 aa18.18■□□□□ 0.5
TSC2-216ENST00000497886 DEKP35659 375 aaKnown RBP18.18■□□□□ 0.5
TSC2-216ENST00000497886 SMG6Q86US8 1419 aaKnown RBP18.18■□□□□ 0.5
TSC2-216ENST00000497886 C9orf84Q5VXU9 1444 aa18.17■□□□□ 0.5
TSC2-216ENST00000497886 RCAN3Q9UKA8 241 aa18.16■□□□□ 0.5
TSC2-216ENST00000497886 CARMIL2Q6F5E8 1435 aa18.16■□□□□ 0.5
TSC2-216ENST00000497886 MYT1LQ9UL68 1186 aa18.15■□□□□ 0.5
TSC2-216ENST00000497886 ZBTB47Q9UFB7 747 aaPredicted RBP18.15■□□□□ 0.5
TSC2-216ENST00000497886 MYBBP1AQ9BQG0 1328 aaKnown RBP18.15■□□□□ 0.5
TSC2-216ENST00000497886 LAS1LQ9Y4W2 734 aaKnown RBP18.14■□□□□ 0.49
TSC2-216ENST00000497886 EIF4G3O43432 1585 aaKnown RBP18.12■□□□□ 0.49
TSC2-216ENST00000497886 RRP1P56182 461 aaKnown RBP18.12■□□□□ 0.49
TSC2-216ENST00000497886 PANK3Q9H999 370 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms