RNA–Protein interactions for RNA: ENST00000497567.1

ATP13A3-210, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 532 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-210ENST00000497567 VSIG10Q8N0Z9 540 aa15.09■□□□□ 0.01
ATP13A3-210ENST00000497567 CRISPLD2Q9H0B8 497 aa15.09■□□□□ 0.01
ATP13A3-210ENST00000497567 LHX8Q68G74 356 aa15.04■□□□□ -0
ATP13A3-210ENST00000497567 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.04■□□□□ -0
ATP13A3-210ENST00000497567 C2orf72A6NCS6 295 aa15.03■□□□□ -0
ATP13A3-210ENST00000497567 PDE4AP27815 886 aa15.03■□□□□ -0
ATP13A3-210ENST00000497567 LARP6Q9BRS8 491 aaKnown RBP15.03■□□□□ -0
ATP13A3-210ENST00000497567 KIF3CO14782 793 aa15.02■□□□□ -0
ATP13A3-210ENST00000497567 GPHNQ9NQX3 736 aaPredicted RBP15.02■□□□□ -0
ATP13A3-210ENST00000497567 TMC2Q8TDI7 906 aa15□□□□□ -0.01
ATP13A3-210ENST00000497567 MAMSTRQ6ZN01 415 aa14.98□□□□□ -0.01
ATP13A3-210ENST00000497567 OTUD5Q96G74 571 aa14.98□□□□□ -0.01
ATP13A3-210ENST00000497567 SCUBE2Q9NQ36 999 aa14.98□□□□□ -0.01
ATP13A3-210ENST00000497567 MFSD10Q14728 455 aa14.97□□□□□ -0.01
ATP13A3-210ENST00000497567 DSG2Q14126 1118 aa14.96□□□□□ -0.01
ATP13A3-210ENST00000497567 DDX27Q96GQ7 796 aaKnown RBP14.94□□□□□ -0.02
ATP13A3-210ENST00000497567 SLAIN1Q8ND83 568 aa14.93□□□□□ -0.02
ATP13A3-210ENST00000497567 WDR70Q9NW82 654 aa14.93□□□□□ -0.02
ATP13A3-210ENST00000497567 FOXK1P85037 733 aa14.92□□□□□ -0.02
ATP13A3-210ENST00000497567 PPP1R15BQ5SWA1 713 aa14.92□□□□□ -0.02
ATP13A3-210ENST00000497567 PLPP6Q8IY26 295 aa14.89□□□□□ -0.03
ATP13A3-210ENST00000497567 E2F4Q16254 413 aa14.82□□□□□ -0.04
ATP13A3-210ENST00000497567 KCNV2Q8TDN2 545 aa14.81□□□□□ -0.04
ATP13A3-210ENST00000497567 CAMK2BQ13554 666 aa14.8□□□□□ -0.04
ATP13A3-210ENST00000497567 EMILIN3Q9NT22 766 aa14.78□□□□□ -0.04
ATP13A3-210ENST00000497567 HOXB3P14651 431 aaPredicted RBP14.74□□□□□ -0.05
ATP13A3-210ENST00000497567 UPF1Q92900 1129 aaKnown RBP eCLIP14.72□□□□□ -0.05
ATP13A3-210ENST00000497567 P3H3Q8IVL6 736 aa14.7□□□□□ -0.06
ATP13A3-210ENST00000497567 OXER1Q8TDS5 423 aa14.69□□□□□ -0.06
ATP13A3-210ENST00000497567 SLC34A2O95436 690 aa14.68□□□□□ -0.06
ATP13A3-210ENST00000497567 DPYSL4O14531 572 aa14.67□□□□□ -0.06
ATP13A3-210ENST00000497567 DOK7Q18PE1 504 aa14.66□□□□□ -0.06
ATP13A3-210ENST00000497567 PTCD2Q8WV60 388 aaKnown RBP14.66□□□□□ -0.06
ATP13A3-210ENST00000497567 ARHGEF1Q92888 912 aaKnown RBP14.65□□□□□ -0.06
ATP13A3-210ENST00000497567 ARIH1Q9Y4X5 557 aaPredicted RBP14.65□□□□□ -0.06
ATP13A3-210ENST00000497567 PCDHGA4Q9Y5G9 962 aa14.63□□□□□ -0.07
ATP13A3-210ENST00000497567 SNPHO15079 494 aa14.62□□□□□ -0.07
ATP13A3-210ENST00000497567 MAP3K9P80192 1104 aa14.61□□□□□ -0.07
ATP13A3-210ENST00000497567 KHSRPQ92945 711 aaKnown RBP eCLIP14.6□□□□□ -0.073e-9■■■■■ 28.9
ATP13A3-210ENST00000497567 ARSIQ5FYB1 569 aa14.59□□□□□ -0.07
ATP13A3-210ENST00000497567 GPR153Q6NV75 609 aa14.58□□□□□ -0.08
ATP13A3-210ENST00000497567 ZNF710Q8N1W2 664 aa14.58□□□□□ -0.08
ATP13A3-210ENST00000497567 RIMBP2O15034 1052 aa14.56□□□□□ -0.08
ATP13A3-210ENST00000497567 TBC1D12O60347 775 aa14.55□□□□□ -0.08
ATP13A3-210ENST00000497567 ZSWIM6Q9HCJ5 1215 aa14.54□□□□□ -0.08
ATP13A3-210ENST00000497567 EVI5O60447 810 aa14.53□□□□□ -0.08
ATP13A3-210ENST00000497567 PDIA6Q15084 440 aa14.53□□□□□ -0.08
ATP13A3-210ENST00000497567 KDM4FA0A1W2PPD8 638 aa14.52□□□□□ -0.09
ATP13A3-210ENST00000497567 NUDT7P0C024 238 aa14.52□□□□□ -0.09
ATP13A3-210ENST00000497567 SEMA3EO15041 775 aa14.51□□□□□ -0.09
ATP13A3-210ENST00000497567 FAM163AQ96GL9 167 aaPredicted RBP14.51□□□□□ -0.09
ATP13A3-210ENST00000497567 SPDYE16A6NNV3 312 aaPredicted RBP14.5□□□□□ -0.09
ATP13A3-210ENST00000497567 ST18O60284 1047 aa14.5□□□□□ -0.09
ATP13A3-210ENST00000497567 NBR1Q14596 966 aa14.5□□□□□ -0.09
ATP13A3-210ENST00000497567 HOXB1P14653 301 aaPredicted RBP14.49□□□□□ -0.09
ATP13A3-210ENST00000497567 BCANQ96GW7 911 aa14.47□□□□□ -0.09
ATP13A3-210ENST00000497567 ANO8Q9HCE9 1232 aaPredicted RBP14.47□□□□□ -0.09
ATP13A3-210ENST00000497567 LCE2DQ5TA82 110 aaPredicted RBP14.46□□□□□ -0.09
ATP13A3-210ENST00000497567 MLLT3P42568 568 aaPredicted RBP14.44□□□□□ -0.1
ATP13A3-210ENST00000497567 TESPA1A2RU30 521 aaPredicted RBP14.42□□□□□ -0.1
ATP13A3-210ENST00000497567 DDX12PQ92771 950 aa14.41□□□□□ -0.1
ATP13A3-210ENST00000497567 LHX6Q9UPM6 363 aa14.41□□□□□ -0.1
ATP13A3-210ENST00000497567 ZNF316A6NFI3 1004 aaPredicted RBP14.4□□□□□ -0.1
ATP13A3-210ENST00000497567 MARVELD3Q96A59 401 aa14.4□□□□□ -0.1
ATP13A3-210ENST00000497567 PTGER2P43116 358 aa14.39□□□□□ -0.11
ATP13A3-210ENST00000497567 GRXCR2A6NFK2 248 aa14.38□□□□□ -0.11
ATP13A3-210ENST00000497567 EMP3P54852 163 aa14.33□□□□□ -0.12
ATP13A3-210ENST00000497567 PCDHGA10Q9Y5H3 936 aa14.33□□□□□ -0.12
ATP13A3-210ENST00000497567 FOSBP53539 338 aa14.32□□□□□ -0.12
ATP13A3-210ENST00000497567 PRIM1P49642 420 aaKnown RBP14.31□□□□□ -0.12
ATP13A3-210ENST00000497567 ZNF454Q8N9F8 522 aa14.31□□□□□ -0.12
ATP13A3-210ENST00000497567 JPH4Q96JJ6 628 aa14.31□□□□□ -0.12
ATP13A3-210ENST00000497567 PHF14O94880 888 aa14.3□□□□□ -0.12
ATP13A3-210ENST00000497567 OSBPP22059 807 aa14.3□□□□□ -0.12
ATP13A3-210ENST00000497567 ERBB3P21860 1342 aa14.29□□□□□ -0.12
ATP13A3-210ENST00000497567 POTEB3A0JP26 581 aa14.27□□□□□ -0.13
ATP13A3-210ENST00000497567 FAM205CA6NFA0 338 aa14.27□□□□□ -0.13
ATP13A3-210ENST00000497567 VARS2Q5ST30 1063 aaKnown RBP14.27□□□□□ -0.13
ATP13A3-210ENST00000497567 POTEBQ6S5H4 581 aa14.27□□□□□ -0.13
ATP13A3-210ENST00000497567 SMYD5Q6GMV2 418 aa14.26□□□□□ -0.13
ATP13A3-210ENST00000497567 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.26□□□□□ -0.13
ATP13A3-210ENST00000497567 RBM26Q5T8P6 1007 aaKnown RBP14.25□□□□□ -0.13
ATP13A3-210ENST00000497567 EPAS1Q99814 870 aa14.25□□□□□ -0.13
ATP13A3-210ENST00000497567 TYW1BQ6NUM6 668 aa14.24□□□□□ -0.13
ATP13A3-210ENST00000497567 RBM33Q96EV2 1170 aaKnown RBP14.24□□□□□ -0.13
ATP13A3-210ENST00000497567 ZDHHC16Q969W1 377 aa14.23□□□□□ -0.13
ATP13A3-210ENST00000497567 ADAM33Q9BZ11 813 aa14.23□□□□□ -0.13
ATP13A3-210ENST00000497567 PSDA5PKW4 1024 aaPredicted RBP14.22□□□□□ -0.13
ATP13A3-210ENST00000497567 PPP4R3BQ5MIZ7 849 aa14.22□□□□□ -0.13
ATP13A3-210ENST00000497567 LMOD2Q6P5Q4 547 aa14.22□□□□□ -0.13
ATP13A3-210ENST00000497567 EN1Q05925 392 aaPredicted RBP14.21□□□□□ -0.13
ATP13A3-210ENST00000497567 HS3ST6Q96QI5 342 aa14.21□□□□□ -0.13
ATP13A3-210ENST00000497567 TULP1O00294 542 aaPredicted RBP14.2□□□□□ -0.14
ATP13A3-210ENST00000497567 FBXW7Q969H0 707 aa14.19□□□□□ -0.14
ATP13A3-210ENST00000497567 MAP3K7O43318 606 aa14.17□□□□□ -0.14
ATP13A3-210ENST00000497567 TSR1Q2NL82 804 aaKnown RBP14.17□□□□□ -0.14
ATP13A3-210ENST00000497567 CDHR5Q9HBB8 845 aa14.16□□□□□ -0.14
ATP13A3-210ENST00000497567 C6orf132Q5T0Z8 1188 aa14.14□□□□□ -0.15
ATP13A3-210ENST00000497567 POTEEQ6S8J3 1075 aa14.14□□□□□ -0.15
ATP13A3-210ENST00000497567 BCL2L12Q9HB09 334 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms