RNA–Protein interactions for RNA: ENST00000497165.5

ARF1-212, Transcript of ADP ribosylation factor 1, humanhuman

TSL 3

Gene ARF1, Length 675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-212ENST00000497165 RICTORQ6R327 1708 aa24.67■■□□□ 1.54
ARF1-212ENST00000497165 SUPT6HQ7KZ85 1726 aaKnown RBP24.67■■□□□ 1.54
ARF1-212ENST00000497165 RAPGEF3O95398 923 aa24.64■■□□□ 1.54
ARF1-212ENST00000497165 DENND4BO75064 1496 aaPredicted RBP24.64■■□□□ 1.53
ARF1-212ENST00000497165 ADGRL1O94910 1474 aa24.64■■□□□ 1.53
ARF1-212ENST00000497165 LRRC9Q6ZRR7 1453 aa24.64■■□□□ 1.53
ARF1-212ENST00000497165 GPATCH8Q9UKJ3 1502 aaKnown RBP24.63■■□□□ 1.53
ARF1-212ENST00000497165 FRMPD1Q5SYB0 1578 aa24.63■■□□□ 1.53
ARF1-212ENST00000497165 APLP2Q06481 763 aa24.62■■□□□ 1.53
ARF1-212ENST00000497165 CCNB3Q8WWL7 1395 aa24.61■■□□□ 1.53
ARF1-212ENST00000497165 ITSN2Q9NZM3 1697 aa24.61■■□□□ 1.53
ARF1-212ENST00000497165 SCAPERQ9BY12 1400 aa24.61■■□□□ 1.53
ARF1-212ENST00000497165 KANK4Q5T7N3 995 aaPredicted RBP24.58■■□□□ 1.53
ARF1-212ENST00000497165 NCOA2Q15596 1464 aa24.58■■□□□ 1.52
ARF1-212ENST00000497165 CFDP1Q9UEE9 299 aaPredicted RBP24.54■■□□□ 1.52
ARF1-212ENST00000497165 SAMD9LQ8IVG5 1584 aa24.54■■□□□ 1.52
ARF1-212ENST00000497165 POGZQ7Z3K3 1410 aa24.53■■□□□ 1.52
ARF1-212ENST00000497165 ABCC1P33527 1531 aa24.53■■□□□ 1.52
ARF1-212ENST00000497165 ZNF777Q9ULD5 760 aaPredicted RBP24.53■■□□□ 1.52
ARF1-212ENST00000497165 ZMYM4Q5VZL5 1548 aa24.52■■□□□ 1.52
ARF1-212ENST00000497165 ZNF518AQ6AHZ1 1483 aa24.49■■□□□ 1.51
ARF1-212ENST00000497165 ARHGEF12Q9NZN5 1544 aa24.49■■□□□ 1.51
ARF1-212ENST00000497165 KDM5CP41229 1560 aa24.46■■□□□ 1.51
ARF1-212ENST00000497165 MAGI2Q86UL8 1455 aa24.46■■□□□ 1.51
ARF1-212ENST00000497165 PLEKHH2Q8IVE3 1493 aa24.45■■□□□ 1.51
ARF1-212ENST00000497165 AFAP1Q8N556 730 aa24.45■■□□□ 1.5
ARF1-212ENST00000497165 ARHGEF40Q8TER5 1519 aa24.45■■□□□ 1.5
ARF1-212ENST00000497165 SYCP2Q9BX26 1530 aa24.45■■□□□ 1.5
ARF1-212ENST00000497165 KIAA1107Q9UPP5 1409 aa24.44■■□□□ 1.5
ARF1-212ENST00000497165 TRAPPC8Q9Y2L5 1435 aa24.44■■□□□ 1.5
ARF1-212ENST00000497165 ZFYVE16Q7Z3T8 1539 aa24.43■■□□□ 1.5
ARF1-212ENST00000497165 HNRNPMP52272 730 aaKnown RBP eCLIP24.42■■□□□ 1.51e-6■■■□□ 17.1
ARF1-212ENST00000497165 HECW2Q9P2P5 1572 aa24.41■■□□□ 1.5
ARF1-212ENST00000497165 ZNF644Q9H582 1327 aaPredicted RBP24.4■■□□□ 1.5
ARF1-212ENST00000497165 YEATS2Q9ULM3 1422 aa24.39■■□□□ 1.5
ARF1-212ENST00000497165 MYOM3Q5VTT5 1437 aa24.38■■□□□ 1.49
ARF1-212ENST00000497165 KIDINS220Q9ULH0 1771 aa24.37■■□□□ 1.49
ARF1-212ENST00000497165 CAMSAP2Q08AD1 1489 aa24.37■■□□□ 1.49
ARF1-212ENST00000497165 MLH3Q9UHC1 1453 aa24.37■■□□□ 1.49
ARF1-212ENST00000497165 MYT1LQ9UL68 1186 aa24.36■■□□□ 1.49
ARF1-212ENST00000497165 KDM4FA0A1W2PPD8 638 aa24.35■■□□□ 1.49
ARF1-212ENST00000497165 MIA2Q96PC5 1412 aa24.35■■□□□ 1.49
ARF1-212ENST00000497165 MBD5Q9P267 1494 aa24.34■■□□□ 1.49
ARF1-212ENST00000497165 ATP10AO60312 1499 aa24.33■■□□□ 1.49
ARF1-212ENST00000497165 SIGLEC1Q9BZZ2 1709 aa24.32■■□□□ 1.48
ARF1-212ENST00000497165 ABCA6Q8N139 1617 aa24.32■■□□□ 1.48
ARF1-212ENST00000497165 DIP2CQ9Y2E4 1556 aa24.31■■□□□ 1.48
ARF1-212ENST00000497165 SPAG9O60271 1321 aaKnown RBP24.3■■□□□ 1.48
ARF1-212ENST00000497165 ARID4BQ4LE39 1312 aaPredicted RBP24.3■■□□□ 1.48
ARF1-212ENST00000497165 BCORL1Q5H9F3 1711 aa24.3■■□□□ 1.48
ARF1-212ENST00000497165 RSPH4AQ5TD94 716 aa24.29■■□□□ 1.48
ARF1-212ENST00000497165 ARHGEF5Q12774 1597 aa24.29■■□□□ 1.48
ARF1-212ENST00000497165 INO80Q9ULG1 1556 aaPredicted RBP24.29■■□□□ 1.48
ARF1-212ENST00000497165 PTPN23Q9H3S7 1636 aa24.28■■□□□ 1.48
ARF1-212ENST00000497165 C9orf84Q5VXU9 1444 aa24.28■■□□□ 1.48
ARF1-212ENST00000497165 ATP7AQ04656 1500 aa24.27■■□□□ 1.48
ARF1-212ENST00000497165 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
ARF1-212ENST00000497165 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
ARF1-212ENST00000497165 REREQ9P2R6 1566 aa24.25■■□□□ 1.47
ARF1-212ENST00000497165 ADAMTSL3P82987 1691 aa24.24■■□□□ 1.47
ARF1-212ENST00000497165 FGD6Q6ZV73 1430 aa24.24■■□□□ 1.47
ARF1-212ENST00000497165 ADGBQ8N7X0 1667 aa24.22■■□□□ 1.47
ARF1-212ENST00000497165 RTEL1-TNFRSF6BF6WH68 1400 aa24.21■■□□□ 1.47
ARF1-212ENST00000497165 PPARGC1BQ86YN6 1023 aaKnown RBP24.21■■□□□ 1.47
ARF1-212ENST00000497165 TCOF1Q13428 1488 aaKnown RBP24.19■■□□□ 1.46
ARF1-212ENST00000497165 TSPY4P0CV99 314 aa24.19■■□□□ 1.46
ARF1-212ENST00000497165 TSPY10P0CW01 314 aa24.19■■□□□ 1.46
ARF1-212ENST00000497165 CROCC2H7BZ55 1655 aa24.16■■□□□ 1.46
ARF1-212ENST00000497165 MADDQ8WXG6 1647 aa24.16■■□□□ 1.46
ARF1-212ENST00000497165 FER1L4A9Z1Z3 1794 aa24.16■■□□□ 1.46
ARF1-212ENST00000497165 MAST1Q9Y2H9 1570 aa24.16■■□□□ 1.46
ARF1-212ENST00000497165 AGLP35573 1532 aa24.15■■□□□ 1.46
ARF1-212ENST00000497165 DNMT1P26358 1616 aaKnown RBP24.14■■□□□ 1.46
ARF1-212ENST00000497165 MLECQ14165 292 aa24.14■■□□□ 1.45
ARF1-212ENST00000497165 RIMS1Q86UR5 1692 aaKnown RBP24.13■■□□□ 1.45
ARF1-212ENST00000497165 A2MP01023 1474 aa24.13■■□□□ 1.45
ARF1-212ENST00000497165 PLXNC1O60486 1568 aa24.12■■□□□ 1.45
ARF1-212ENST00000497165 ABCC5O15440 1437 aa24.1■■□□□ 1.45
ARF1-212ENST00000497165 DAPK1P53355 1430 aa24.09■■□□□ 1.45
ARF1-212ENST00000497165 FAM50AQ14320 339 aaKnown RBP24.08■■□□□ 1.45
ARF1-212ENST00000497165 SHANK2Q9UPX8 1470 aa24.07■■□□□ 1.44
ARF1-212ENST00000497165 DHX29Q7Z478 1369 aaKnown RBP24.06■■□□□ 1.44
ARF1-212ENST00000497165 PTPRMP28827 1452 aa24.06■■□□□ 1.44
ARF1-212ENST00000497165 CHIC2Q9UKJ5 165 aa23.98■■□□□ 1.43
ARF1-212ENST00000497165 DUOX2Q9NRD8 1548 aa23.97■■□□□ 1.43
ARF1-212ENST00000497165 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.97■■□□□ 1.437e-9■■□□□ 12.8
ARF1-212ENST00000497165 EIF2AK4Q9P2K8 1649 aaKnown RBP23.96■■□□□ 1.43
ARF1-212ENST00000497165 GGT6Q6P531 493 aa23.96■■□□□ 1.43
ARF1-212ENST00000497165 ESF1Q9H501 851 aaKnown RBP23.96■■□□□ 1.43
ARF1-212ENST00000497165 KIF3BO15066 747 aa23.95■■□□□ 1.42
ARF1-212ENST00000497165 CLTCQ00610 1675 aaKnown RBP23.95■■□□□ 1.42
ARF1-212ENST00000497165 SETD1BQ9UPS6 1966 aaKnown RBP23.94■■□□□ 1.42
ARF1-212ENST00000497165 ANKRD30AQ9BXX3 1397 aa23.94■■□□□ 1.42
ARF1-212ENST00000497165 KIF15Q9NS87 1388 aa23.94■■□□□ 1.42
ARF1-212ENST00000497165 RRP7BPQ9NSQ0 103 aa23.94■■□□□ 1.42
ARF1-212ENST00000497165 MROH2AA6NES4 1674 aa23.94■■□□□ 1.42
ARF1-212ENST00000497165 C3P01024 1663 aa23.94■■□□□ 1.42
ARF1-212ENST00000497165 RRBP1Q9P2E9 1410 aaKnown RBP23.93■■□□□ 1.42
ARF1-212ENST00000497165 ADGRL2O95490 1459 aa23.93■■□□□ 1.42
ARF1-212ENST00000497165 NCOA1Q15788 1441 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms