RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 ZFYVE16Q7Z3T8 1539 aa16.7■□□□□ 0.26
SRSF4-205ENST00000497015 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.7■□□□□ 0.26
SRSF4-205ENST00000497015 SAMD9Q5K651 1589 aa16.69■□□□□ 0.26
SRSF4-205ENST00000497015 HECW1Q76N89 1606 aa16.69■□□□□ 0.26
SRSF4-205ENST00000497015 DMRT2Q9Y5R5 561 aa16.68■□□□□ 0.26
SRSF4-205ENST00000497015 ARHGEF12Q9NZN5 1544 aa16.68■□□□□ 0.26
SRSF4-205ENST00000497015 MAGI2Q86UL8 1455 aa16.67■□□□□ 0.26
SRSF4-205ENST00000497015 EFCAB5A4FU69 1503 aa16.65■□□□□ 0.26
SRSF4-205ENST00000497015 SPATA31D1Q6ZQQ2 1576 aa16.65■□□□□ 0.26
SRSF4-205ENST00000497015 SCAPERQ9BY12 1400 aa16.65■□□□□ 0.26
SRSF4-205ENST00000497015 FER1L4A9Z1Z3 1794 aa16.65■□□□□ 0.26
SRSF4-205ENST00000497015 RANGAP1P46060 587 aaPredicted RBP16.64■□□□□ 0.25
SRSF4-205ENST00000497015 ATP10AO60312 1499 aa16.64■□□□□ 0.25
SRSF4-205ENST00000497015 LTBP4Q8N2S1 1624 aa16.63■□□□□ 0.25
SRSF4-205ENST00000497015 PREX1Q8TCU6 1659 aa16.62■□□□□ 0.25
SRSF4-205ENST00000497015 PTPRTO14522 1441 aa16.61■□□□□ 0.25
SRSF4-205ENST00000497015 PLCH2O75038 1416 aa16.61■□□□□ 0.25
SRSF4-205ENST00000497015 CSRNP3Q8WYN3 585 aa16.59■□□□□ 0.25
SRSF4-205ENST00000497015 C9orf84Q5VXU9 1444 aa16.58■□□□□ 0.24
SRSF4-205ENST00000497015 UHRF1BP1Q6BDS2 1440 aa16.58■□□□□ 0.24
SRSF4-205ENST00000497015 CFAP74Q9C0B2 1584 aa16.58■□□□□ 0.24
SRSF4-205ENST00000497015 AFAP1Q8N556 730 aa16.57■□□□□ 0.24
SRSF4-205ENST00000497015 EFCAB2Q5VUJ9 269 aa16.53■□□□□ 0.24
SRSF4-205ENST00000497015 CDK13Q14004 1512 aaKnown RBP16.52■□□□□ 0.24
SRSF4-205ENST00000497015 SETD1BQ9UPS6 1966 aaKnown RBP16.52■□□□□ 0.24
SRSF4-205ENST00000497015 IQSEC2Q5JU85 1478 aa16.49■□□□□ 0.23
SRSF4-205ENST00000497015 NCOA1Q15788 1441 aa16.48■□□□□ 0.23
SRSF4-205ENST00000497015 TRAPPC8Q9Y2L5 1435 aa16.48■□□□□ 0.23
SRSF4-205ENST00000497015 ZNF335Q9H4Z2 1342 aaPredicted RBP16.47■□□□□ 0.23
SRSF4-205ENST00000497015 C3P01024 1663 aa16.46■□□□□ 0.23
SRSF4-205ENST00000497015 NCKAP5LQ9HCH0 1330 aa16.46■□□□□ 0.23
SRSF4-205ENST00000497015 UBAP1LF5GYI3 381 aa16.45■□□□□ 0.22
SRSF4-205ENST00000497015 KDM5CP41229 1560 aa16.44■□□□□ 0.22
SRSF4-205ENST00000497015 DIP2CQ9Y2E4 1556 aa16.44■□□□□ 0.22
SRSF4-205ENST00000497015 ZNF518AQ6AHZ1 1483 aa16.43■□□□□ 0.22
SRSF4-205ENST00000497015 MYT1LQ9UL68 1186 aa16.41■□□□□ 0.22
SRSF4-205ENST00000497015 REREQ9P2R6 1566 aa16.4■□□□□ 0.22
SRSF4-205ENST00000497015 ATP1B4Q9UN42 357 aaPredicted RBP16.4■□□□□ 0.22
SRSF4-205ENST00000497015 MLH3Q9UHC1 1453 aa16.4■□□□□ 0.22
SRSF4-205ENST00000497015 KIF14Q15058 1648 aa16.39■□□□□ 0.21
SRSF4-205ENST00000497015 CAMSAP1Q5T5Y3 1602 aa16.39■□□□□ 0.21
SRSF4-205ENST00000497015 AGLP35573 1532 aa16.39■□□□□ 0.21
SRSF4-205ENST00000497015 ABCA6Q8N139 1617 aa16.38■□□□□ 0.21
SRSF4-205ENST00000497015 HSPA1LP34931 641 aa16.38■□□□□ 0.21
SRSF4-205ENST00000497015 SLC4A1APQ9BWU0 796 aaKnown RBP16.38■□□□□ 0.21
SRSF4-205ENST00000497015 ESF1Q9H501 851 aaKnown RBP16.37■□□□□ 0.21
SRSF4-205ENST00000497015 ZMYM3Q14202 1370 aa16.37■□□□□ 0.21
SRSF4-205ENST00000497015 MYO5CQ9NQX4 1742 aa16.36■□□□□ 0.21
SRSF4-205ENST00000497015 ARHGAP5Q13017 1502 aa16.35■□□□□ 0.21
SRSF4-205ENST00000497015 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
SRSF4-205ENST00000497015 TROQ12816 1431 aaPredicted RBP16.33■□□□□ 0.2
SRSF4-205ENST00000497015 NPATQ14207 1427 aa16.33■□□□□ 0.2
SRSF4-205ENST00000497015 CDK11AQ9UQ88 783 aaPredicted RBP16.32■□□□□ 0.2
SRSF4-205ENST00000497015 CNTLNQ9NXG0 1405 aa16.31■□□□□ 0.2
SRSF4-205ENST00000497015 PKD2Q13563 968 aa16.31■□□□□ 0.2
SRSF4-205ENST00000497015 CDC42BPBQ9Y5S2 1711 aa16.31■□□□□ 0.2
SRSF4-205ENST00000497015 KIDINS220Q9ULH0 1771 aa16.3■□□□□ 0.2
SRSF4-205ENST00000497015 MED1Q15648 1581 aaPredicted RBP16.3■□□□□ 0.2
SRSF4-205ENST00000497015 TCOF1Q13428 1488 aaKnown RBP16.29■□□□□ 0.2
SRSF4-205ENST00000497015 PIP4K2BP78356 416 aa16.29■□□□□ 0.2
SRSF4-205ENST00000497015 EEA1Q15075 1411 aa16.27■□□□□ 0.19
SRSF4-205ENST00000497015 ABCC1P33527 1531 aa16.26■□□□□ 0.19
SRSF4-205ENST00000497015 PLA2R1Q13018 1463 aa16.26■□□□□ 0.19
SRSF4-205ENST00000497015 ARHGAP35Q9NRY4 1499 aa16.26■□□□□ 0.19
SRSF4-205ENST00000497015 PTPRKQ15262 1439 aa16.26■□□□□ 0.19
SRSF4-205ENST00000497015 FMN1Q68DA7 1419 aa16.25■□□□□ 0.19
SRSF4-205ENST00000497015 SCAF1Q9H7N4 1312 aaKnown RBP16.24■□□□□ 0.19
SRSF4-205ENST00000497015 LRRIQ1Q96JM4 1722 aa16.23■□□□□ 0.19
SRSF4-205ENST00000497015 HNRNPMP52272 730 aaKnown RBP eCLIP16.23■□□□□ 0.19
SRSF4-205ENST00000497015 MROH2AA6NES4 1674 aa16.22■□□□□ 0.19
SRSF4-205ENST00000497015 ITSN2Q9NZM3 1697 aa16.21■□□□□ 0.19
SRSF4-205ENST00000497015 TOM1O60784 492 aa16.21■□□□□ 0.19
SRSF4-205ENST00000497015 CLIP1P30622 1438 aa16.2■□□□□ 0.18
SRSF4-205ENST00000497015 ALKQ9UM73 1620 aa16.2■□□□□ 0.18
SRSF4-205ENST00000497015 SAMD9LQ8IVG5 1584 aa16.2■□□□□ 0.18
SRSF4-205ENST00000497015 CEP170BQ9Y4F5 1589 aaPredicted RBP16.2■□□□□ 0.18
SRSF4-205ENST00000497015 GGT6Q6P531 493 aa16.19■□□□□ 0.18
SRSF4-205ENST00000497015 RGS17Q9UGC6 210 aaPredicted RBP16.19■□□□□ 0.18
SRSF4-205ENST00000497015 ZNF777Q9ULD5 760 aaPredicted RBP16.19■□□□□ 0.18
SRSF4-205ENST00000497015 PREX2Q70Z35 1606 aa16.19■□□□□ 0.18
SRSF4-205ENST00000497015 MYO3AQ8NEV4 1616 aa16.19■□□□□ 0.18
SRSF4-205ENST00000497015 ZNF142P52746 1687 aaPredicted RBP16.18■□□□□ 0.18
SRSF4-205ENST00000497015 UBTFP17480 764 aaKnown RBP16.18■□□□□ 0.18
SRSF4-205ENST00000497015 SPAG9O60271 1321 aaKnown RBP16.18■□□□□ 0.18
SRSF4-205ENST00000497015 CLTCQ00610 1675 aaKnown RBP16.18■□□□□ 0.18
SRSF4-205ENST00000497015 SUPT6HQ7KZ85 1726 aaKnown RBP16.16■□□□□ 0.18
SRSF4-205ENST00000497015 FBXO31Q5XUX0 539 aaPredicted RBP16.16■□□□□ 0.18
SRSF4-205ENST00000497015 SHANK2Q9UPX8 1470 aa16.16■□□□□ 0.18
SRSF4-205ENST00000497015 DNMT1P26358 1616 aaKnown RBP16.15■□□□□ 0.18
SRSF4-205ENST00000497015 A2ML1A8K2U0 1454 aa16.13■□□□□ 0.17
SRSF4-205ENST00000497015 CDC42BPAQ5VT25 1732 aa16.13■□□□□ 0.17
SRSF4-205ENST00000497015 PLXNC1O60486 1568 aa16.13■□□□□ 0.17
SRSF4-205ENST00000497015 NEURL4Q96JN8 1562 aa16.13■□□□□ 0.17
SRSF4-205ENST00000497015 A2MP01023 1474 aa16.12■□□□□ 0.17
SRSF4-205ENST00000497015 FOXD1Q16676 465 aa16.12■□□□□ 0.17
SRSF4-205ENST00000497015 CPS1P31327 1500 aa16.12■□□□□ 0.17
SRSF4-205ENST00000497015 SYCP2Q9BX26 1530 aa16.11■□□□□ 0.17
SRSF4-205ENST00000497015 GPATCH8Q9UKJ3 1502 aaKnown RBP16.11■□□□□ 0.17
SRSF4-205ENST00000497015 VWDEQ8N2E2 1590 aa16.09■□□□□ 0.17
SRSF4-205ENST00000497015 ATP7AQ04656 1500 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms