RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 C2orf72A6NCS6 295 aa14.95□□□□□ -0.02
MDM2-220ENST00000496959 KIF3CO14782 793 aa14.93□□□□□ -0.02
MDM2-220ENST00000496959 DOK7Q18PE1 504 aa14.92□□□□□ -0.02
MDM2-220ENST00000496959 ST18O60284 1047 aa14.91□□□□□ -0.02
MDM2-220ENST00000496959 PAXIP1Q6ZW49 1069 aaPredicted RBP14.9□□□□□ -0.02
MDM2-220ENST00000496959 CFAP44Q96MT7 982 aa14.9□□□□□ -0.02
MDM2-220ENST00000496959 HOXB3P14651 431 aaPredicted RBP14.88□□□□□ -0.03
MDM2-220ENST00000496959 LCE2DQ5TA82 110 aaPredicted RBP14.88□□□□□ -0.03
MDM2-220ENST00000496959 ZNF710Q8N1W2 664 aa14.88□□□□□ -0.03
MDM2-220ENST00000496959 RIMBP2O15034 1052 aa14.87□□□□□ -0.03
MDM2-220ENST00000496959 GPHNQ9NQX3 736 aaPredicted RBP14.86□□□□□ -0.03
MDM2-220ENST00000496959 PDE4AP27815 886 aa14.83□□□□□ -0.04
MDM2-220ENST00000496959 POTEMA6NI47 508 aa14.81□□□□□ -0.04
MDM2-220ENST00000496959 FOXK1P85037 733 aa14.81□□□□□ -0.04
MDM2-220ENST00000496959 CRISPLD2Q9H0B8 497 aa14.81□□□□□ -0.04
MDM2-220ENST00000496959 POTEGQ6S5H5 508 aa14.8□□□□□ -0.04
MDM2-220ENST00000496959 ZSWIM6Q9HCJ5 1215 aa14.79□□□□□ -0.04
MDM2-220ENST00000496959 PLPP6Q8IY26 295 aa14.77□□□□□ -0.05
MDM2-220ENST00000496959 NCKAP5LQ9HCH0 1330 aa14.76□□□□□ -0.05
MDM2-220ENST00000496959 DSG2Q14126 1118 aa14.76□□□□□ -0.05
MDM2-220ENST00000496959 HOXB1P14653 301 aaPredicted RBP14.74□□□□□ -0.05
MDM2-220ENST00000496959 CADPS2Q86UW7 1296 aa14.73□□□□□ -0.05
MDM2-220ENST00000496959 MARVELD3Q96A59 401 aa14.73□□□□□ -0.05
MDM2-220ENST00000496959 LARP6Q9BRS8 491 aaKnown RBP14.73□□□□□ -0.05
MDM2-220ENST00000496959 SLC34A2O95436 690 aa14.72□□□□□ -0.05
MDM2-220ENST00000496959 EMP3P54852 163 aa14.71□□□□□ -0.05
MDM2-220ENST00000496959 PPP1R15BQ5SWA1 713 aa14.71□□□□□ -0.05
MDM2-220ENST00000496959 DDX27Q96GQ7 796 aaKnown RBP14.7□□□□□ -0.06
MDM2-220ENST00000496959 GPR153Q6NV75 609 aa14.69□□□□□ -0.06
MDM2-220ENST00000496959 ARSIQ5FYB1 569 aa14.68□□□□□ -0.06
MDM2-220ENST00000496959 MFSD10Q14728 455 aa14.66□□□□□ -0.06
MDM2-220ENST00000496959 PCDHGA4Q9Y5G9 962 aa14.65□□□□□ -0.06
MDM2-220ENST00000496959 PTCD2Q8WV60 388 aaKnown RBP14.63□□□□□ -0.07
MDM2-220ENST00000496959 FAM205CA6NFA0 338 aa14.62□□□□□ -0.07
MDM2-220ENST00000496959 TBC1D12O60347 775 aa14.62□□□□□ -0.07
MDM2-220ENST00000496959 KHSRPQ92945 711 aaKnown RBP eCLIP14.6□□□□□ -0.072e-9■■■□□ 16.5
MDM2-220ENST00000496959 ERBB3P21860 1342 aa14.6□□□□□ -0.07
MDM2-220ENST00000496959 PLCB2Q00722 1185 aa14.59□□□□□ -0.07
MDM2-220ENST00000496959 PCDH10Q9P2E7 1040 aa14.59□□□□□ -0.07
MDM2-220ENST00000496959 NUDT7P0C024 238 aa14.57□□□□□ -0.08
MDM2-220ENST00000496959 HS3ST6Q96QI5 342 aa14.57□□□□□ -0.08
MDM2-220ENST00000496959 UPF1Q92900 1129 aaKnown RBP eCLIP14.56□□□□□ -0.08
MDM2-220ENST00000496959 OXER1Q8TDS5 423 aa14.55□□□□□ -0.08
MDM2-220ENST00000496959 TSHZ2Q9NRE2 1034 aa14.55□□□□□ -0.08
MDM2-220ENST00000496959 CDAN1Q8IWY9 1227 aa14.54□□□□□ -0.08
MDM2-220ENST00000496959 WDR70Q9NW82 654 aa14.54□□□□□ -0.08
MDM2-220ENST00000496959 ZNF316A6NFI3 1004 aaPredicted RBP14.52□□□□□ -0.09
MDM2-220ENST00000496959 VARS2Q5ST30 1063 aaKnown RBP14.51□□□□□ -0.09
MDM2-220ENST00000496959 POTEB3A0JP26 581 aa14.49□□□□□ -0.09
MDM2-220ENST00000496959 POTEBQ6S5H4 581 aa14.49□□□□□ -0.09
MDM2-220ENST00000496959 MAP3K9P80192 1104 aa14.48□□□□□ -0.09
MDM2-220ENST00000496959 CAMK2BQ13554 666 aa14.47□□□□□ -0.09
MDM2-220ENST00000496959 LHX6Q9UPM6 363 aa14.47□□□□□ -0.09
MDM2-220ENST00000496959 EMILIN3Q9NT22 766 aa14.46□□□□□ -0.09
MDM2-220ENST00000496959 KDM4FA0A1W2PPD8 638 aa14.45□□□□□ -0.1
MDM2-220ENST00000496959 PSDA5PKW4 1024 aaPredicted RBP14.43□□□□□ -0.1
MDM2-220ENST00000496959 E2F4Q16254 413 aa14.42□□□□□ -0.1
MDM2-220ENST00000496959 ZNF687Q8N1G0 1237 aa14.41□□□□□ -0.1
MDM2-220ENST00000496959 EVI5O60447 810 aa14.4□□□□□ -0.1
MDM2-220ENST00000496959 HAP1P54257 671 aaPredicted RBP14.39□□□□□ -0.11
MDM2-220ENST00000496959 DPYSL4O14531 572 aa14.36□□□□□ -0.11
MDM2-220ENST00000496959 ANO8Q9HCE9 1232 aaPredicted RBP14.36□□□□□ -0.11
MDM2-220ENST00000496959 PPP4R3BQ5MIZ7 849 aa14.33□□□□□ -0.12
MDM2-220ENST00000496959 KRTAP3-3Q9BYR6 98 aa14.31□□□□□ -0.12
MDM2-220ENST00000496959 KRTAP3-2Q9BYR7 98 aa14.31□□□□□ -0.12
MDM2-220ENST00000496959 ZNF454Q8N9F8 522 aa14.3□□□□□ -0.12
MDM2-220ENST00000496959 PBX2P40425 430 aa14.28□□□□□ -0.12
MDM2-220ENST00000496959 ARIH1Q9Y4X5 557 aaPredicted RBP14.28□□□□□ -0.12
MDM2-220ENST00000496959 SPDYE16A6NNV3 312 aaPredicted RBP14.26□□□□□ -0.13
MDM2-220ENST00000496959 FOSBP53539 338 aa14.26□□□□□ -0.13
MDM2-220ENST00000496959 JPH4Q96JJ6 628 aa14.26□□□□□ -0.13
MDM2-220ENST00000496959 PDIA6Q15084 440 aa14.23□□□□□ -0.13
MDM2-220ENST00000496959 ARHGAP33O14559 1287 aa14.22□□□□□ -0.13
MDM2-220ENST00000496959 P3H3Q8IVL6 736 aa14.21□□□□□ -0.13
MDM2-220ENST00000496959 ZDHHC16Q969W1 377 aa14.21□□□□□ -0.13
MDM2-220ENST00000496959 KCNH8Q96L42 1107 aa14.21□□□□□ -0.13
MDM2-220ENST00000496959 PLSCR2Q9NRY7 297 aa14.21□□□□□ -0.13
MDM2-220ENST00000496959 AXIN2Q9Y2T1 843 aa14.21□□□□□ -0.13
MDM2-220ENST00000496959 PHF14O94880 888 aa14.2□□□□□ -0.14
MDM2-220ENST00000496959 PTGER2P43116 358 aa14.19□□□□□ -0.14
MDM2-220ENST00000496959 POTEEQ6S8J3 1075 aa14.19□□□□□ -0.14
MDM2-220ENST00000496959 ARHGEF1Q92888 912 aaKnown RBP14.19□□□□□ -0.14
MDM2-220ENST00000496959 KCNV2Q8TDN2 545 aa14.18□□□□□ -0.14
MDM2-220ENST00000496959 PCDHGA10Q9Y5H3 936 aa14.18□□□□□ -0.14
MDM2-220ENST00000496959 LSM11P83369 360 aaKnown RBP eCLIP14.17□□□□□ -0.14
MDM2-220ENST00000496959 SPNS2Q8IVW8 549 aa14.17□□□□□ -0.14
MDM2-220ENST00000496959 BCL2L12Q9HB09 334 aa14.17□□□□□ -0.14
MDM2-220ENST00000496959 TYW1BQ6NUM6 668 aa14.16□□□□□ -0.14
MDM2-220ENST00000496959 ANKRD13DQ6ZTN6 518 aa14.16□□□□□ -0.14
MDM2-220ENST00000496959 VSIG10Q8N0Z9 540 aa14.16□□□□□ -0.14
MDM2-220ENST00000496959 DDX12PQ92771 950 aa14.16□□□□□ -0.14
MDM2-220ENST00000496959 FBXW7Q969H0 707 aa14.16□□□□□ -0.14
MDM2-220ENST00000496959 EPAS1Q99814 870 aa14.16□□□□□ -0.14
MDM2-220ENST00000496959 PTPREP23469 700 aa14.14□□□□□ -0.15
MDM2-220ENST00000496959 PSEN2P49810 448 aa14.14□□□□□ -0.15
MDM2-220ENST00000496959 KCNK17Q96T54 332 aa14.14□□□□□ -0.15
MDM2-220ENST00000496959 ADAM33Q9BZ11 813 aa14.14□□□□□ -0.15
MDM2-220ENST00000496959 KDM2AQ9Y2K7 1162 aa14.12□□□□□ -0.15
MDM2-220ENST00000496959 GRXCR2A6NFK2 248 aa14.08□□□□□ -0.16
MDM2-220ENST00000496959 NBR1Q14596 966 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms