RNA–Protein interactions for RNA: ENST00000496746.5

YIF1A-210, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 667 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-210ENST00000496746 CERKQ8TCT0 537 aa24.2■■□□□ 1.46
YIF1A-210ENST00000496746 SCAPERQ9BY12 1400 aa24.19■■□□□ 1.46
YIF1A-210ENST00000496746 ARHGEF12Q9NZN5 1544 aa24.15■■□□□ 1.46
YIF1A-210ENST00000496746 FER1L4A9Z1Z3 1794 aa24.14■■□□□ 1.45
YIF1A-210ENST00000496746 ATP10AO60312 1499 aa24.13■■□□□ 1.45
YIF1A-210ENST00000496746 CEBPAP49715 358 aaPredicted RBP24.11■■□□□ 1.45
YIF1A-210ENST00000496746 C9orf84Q5VXU9 1444 aa24.08■■□□□ 1.44
YIF1A-210ENST00000496746 EFCAB2Q5VUJ9 269 aa24.06■■□□□ 1.44
YIF1A-210ENST00000496746 PREX1Q8TCU6 1659 aa24.03■■□□□ 1.44
YIF1A-210ENST00000496746 AFAP1Q8N556 730 aa24.03■■□□□ 1.44
YIF1A-210ENST00000496746 STRCQ7RTU9 1775 aa24.03■■□□□ 1.44
YIF1A-210ENST00000496746 KIF14Q15058 1648 aa24.02■■□□□ 1.44
YIF1A-210ENST00000496746 MYO5CQ9NQX4 1742 aa24■■□□□ 1.43
YIF1A-210ENST00000496746 ARHGAP35Q9NRY4 1499 aa24■■□□□ 1.43
YIF1A-210ENST00000496746 KDM5CP41229 1560 aa23.99■■□□□ 1.43
YIF1A-210ENST00000496746 ZNF518AQ6AHZ1 1483 aa23.98■■□□□ 1.43
YIF1A-210ENST00000496746 FMN1Q68DA7 1419 aa23.97■■□□□ 1.43
YIF1A-210ENST00000496746 ATP1B4Q9UN42 357 aaPredicted RBP23.97■■□□□ 1.43
YIF1A-210ENST00000496746 ILDR2Q71H61 639 aa23.96■■□□□ 1.43
YIF1A-210ENST00000496746 DIP2CQ9Y2E4 1556 aa23.95■■□□□ 1.43
YIF1A-210ENST00000496746 TROQ12816 1431 aaPredicted RBP23.95■■□□□ 1.42
YIF1A-210ENST00000496746 CDK11AQ9UQ88 783 aaPredicted RBP23.93■■□□□ 1.42
YIF1A-210ENST00000496746 REREQ9P2R6 1566 aa23.92■■□□□ 1.42
YIF1A-210ENST00000496746 DMRT2Q9Y5R5 561 aa23.92■■□□□ 1.42
YIF1A-210ENST00000496746 UHRF1BP1Q6BDS2 1440 aa23.92■■□□□ 1.42
YIF1A-210ENST00000496746 ARHGAP5Q13017 1502 aa23.91■■□□□ 1.42
YIF1A-210ENST00000496746 EHMT2Q96KQ7 1210 aa23.91■■□□□ 1.42
YIF1A-210ENST00000496746 LRRIQ1Q96JM4 1722 aa23.9■■□□□ 1.42
YIF1A-210ENST00000496746 MLH3Q9UHC1 1453 aa23.9■■□□□ 1.42
YIF1A-210ENST00000496746 ABCA6Q8N139 1617 aa23.89■■□□□ 1.42
YIF1A-210ENST00000496746 UBTFP17480 764 aaKnown RBP23.89■■□□□ 1.41
YIF1A-210ENST00000496746 CDC42BPBQ9Y5S2 1711 aa23.87■■□□□ 1.41
YIF1A-210ENST00000496746 SETD1BQ9UPS6 1966 aaKnown RBP23.87■■□□□ 1.41
YIF1A-210ENST00000496746 PTPRTO14522 1441 aa23.87■■□□□ 1.41
YIF1A-210ENST00000496746 TRAPPC8Q9Y2L5 1435 aa23.87■■□□□ 1.41
YIF1A-210ENST00000496746 C3P01024 1663 aa23.86■■□□□ 1.41
YIF1A-210ENST00000496746 DISP3Q9P2K9 1392 aa23.86■■□□□ 1.41
YIF1A-210ENST00000496746 AGLP35573 1532 aa23.85■■□□□ 1.41
YIF1A-210ENST00000496746 LTBP4Q8N2S1 1624 aa23.84■■□□□ 1.41
YIF1A-210ENST00000496746 CLIP1P30622 1438 aa23.82■■□□□ 1.4
YIF1A-210ENST00000496746 ABCC1P33527 1531 aa23.81■■□□□ 1.4
YIF1A-210ENST00000496746 MYT1LQ9UL68 1186 aa23.81■■□□□ 1.4
YIF1A-210ENST00000496746 SOCS7O14512 581 aa23.8■■□□□ 1.4
YIF1A-210ENST00000496746 PREX2Q70Z35 1606 aa23.78■■□□□ 1.4
YIF1A-210ENST00000496746 KIDINS220Q9ULH0 1771 aa23.78■■□□□ 1.4
YIF1A-210ENST00000496746 NCOA1Q15788 1441 aa23.76■■□□□ 1.39
YIF1A-210ENST00000496746 ITSN2Q9NZM3 1697 aa23.76■■□□□ 1.39
YIF1A-210ENST00000496746 CASKIN1Q8WXD9 1431 aa23.72■■□□□ 1.39
YIF1A-210ENST00000496746 CNTLNQ9NXG0 1405 aa23.71■■□□□ 1.39
YIF1A-210ENST00000496746 ESF1Q9H501 851 aaKnown RBP23.7■■□□□ 1.38
YIF1A-210ENST00000496746 IQSEC2Q5JU85 1478 aa23.69■■□□□ 1.38
YIF1A-210ENST00000496746 CDC42BPAQ5VT25 1732 aa23.69■■□□□ 1.38
YIF1A-210ENST00000496746 SAMD9LQ8IVG5 1584 aa23.69■■□□□ 1.38
YIF1A-210ENST00000496746 NPATQ14207 1427 aa23.67■■□□□ 1.38
YIF1A-210ENST00000496746 SPATA31D1Q6ZQQ2 1576 aa23.67■■□□□ 1.38
YIF1A-210ENST00000496746 CCDC18Q5T9S5 1454 aa23.67■■□□□ 1.38
YIF1A-210ENST00000496746 ZMYM3Q14202 1370 aa23.66■■□□□ 1.38
YIF1A-210ENST00000496746 CAMSAP1Q5T5Y3 1602 aa23.66■■□□□ 1.38
YIF1A-210ENST00000496746 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
YIF1A-210ENST00000496746 NCKAP5LQ9HCH0 1330 aa23.64■■□□□ 1.38
YIF1A-210ENST00000496746 GPATCH8Q9UKJ3 1502 aaKnown RBP23.64■■□□□ 1.37
YIF1A-210ENST00000496746 MROH2AA6NES4 1674 aa23.64■■□□□ 1.37
YIF1A-210ENST00000496746 HNRNPMP52272 730 aaKnown RBP eCLIP23.62■■□□□ 1.37
YIF1A-210ENST00000496746 ZNF777Q9ULD5 760 aaPredicted RBP23.61■■□□□ 1.37
YIF1A-210ENST00000496746 ZNF335Q9H4Z2 1342 aaPredicted RBP23.6■■□□□ 1.37
YIF1A-210ENST00000496746 SYCP2Q9BX26 1530 aa23.6■■□□□ 1.37
YIF1A-210ENST00000496746 SPAG9O60271 1321 aaKnown RBP23.59■■□□□ 1.37
YIF1A-210ENST00000496746 PLXNC1O60486 1568 aa23.57■■□□□ 1.36
YIF1A-210ENST00000496746 SUPT6HQ7KZ85 1726 aaKnown RBP23.57■■□□□ 1.36
YIF1A-210ENST00000496746 PTPRKQ15262 1439 aa23.57■■□□□ 1.36
YIF1A-210ENST00000496746 FYCO1Q9BQS8 1478 aa23.56■■□□□ 1.36
YIF1A-210ENST00000496746 KIAA1107Q9UPP5 1409 aa23.55■■□□□ 1.36
YIF1A-210ENST00000496746 TCOF1Q13428 1488 aaKnown RBP23.55■■□□□ 1.36
YIF1A-210ENST00000496746 CLTCQ00610 1675 aaKnown RBP23.54■■□□□ 1.36
YIF1A-210ENST00000496746 ATP7AQ04656 1500 aa23.54■■□□□ 1.36
YIF1A-210ENST00000496746 INO80Q9ULG1 1556 aaPredicted RBP23.54■■□□□ 1.36
YIF1A-210ENST00000496746 PLA2R1Q13018 1463 aa23.54■■□□□ 1.36
YIF1A-210ENST00000496746 A2MP01023 1474 aa23.53■■□□□ 1.36
YIF1A-210ENST00000496746 ZNF142P52746 1687 aaPredicted RBP23.53■■□□□ 1.36
YIF1A-210ENST00000496746 MYO3AQ8NEV4 1616 aa23.52■■□□□ 1.36
YIF1A-210ENST00000496746 PKD2Q13563 968 aa23.51■■□□□ 1.35
YIF1A-210ENST00000496746 CEP170BQ9Y4F5 1589 aaPredicted RBP23.5■■□□□ 1.35
YIF1A-210ENST00000496746 UBAP1LF5GYI3 381 aa23.5■■□□□ 1.35
YIF1A-210ENST00000496746 GGT6Q6P531 493 aa23.48■■□□□ 1.35
YIF1A-210ENST00000496746 CFDP1Q9UEE9 299 aaPredicted RBP23.48■■□□□ 1.35
YIF1A-210ENST00000496746 PLEKHH2Q8IVE3 1493 aa23.46■■□□□ 1.35
YIF1A-210ENST00000496746 ZNF644Q9H582 1327 aaPredicted RBP23.45■■□□□ 1.34
YIF1A-210ENST00000496746 CCNB3Q8WWL7 1395 aa23.43■■□□□ 1.34
YIF1A-210ENST00000496746 PPP6R1Q9UPN7 881 aa23.43■■□□□ 1.34
YIF1A-210ENST00000496746 MBD5Q9P267 1494 aa23.43■■□□□ 1.34
YIF1A-210ENST00000496746 A2ML1A8K2U0 1454 aa23.41■■□□□ 1.34
YIF1A-210ENST00000496746 DNMT1P26358 1616 aaKnown RBP23.41■■□□□ 1.34
YIF1A-210ENST00000496746 ADGBQ8N7X0 1667 aa23.38■■□□□ 1.33
YIF1A-210ENST00000496746 FBXO31Q5XUX0 539 aaPredicted RBP23.37■■□□□ 1.33
YIF1A-210ENST00000496746 DHX29Q7Z478 1369 aaKnown RBP23.36■■□□□ 1.33
YIF1A-210ENST00000496746 TIAM1Q13009 1591 aa23.35■■□□□ 1.33
YIF1A-210ENST00000496746 NEURL4Q96JN8 1562 aa23.35■■□□□ 1.33
YIF1A-210ENST00000496746 RTEL1-TNFRSF6BF6WH68 1400 aa23.35■■□□□ 1.33
YIF1A-210ENST00000496746 HSPA1LP34931 641 aa23.34■■□□□ 1.33
YIF1A-210ENST00000496746 MTUS2Q5JR59 1369 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms