RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 HSPA5P11021 654 aaKnown RBP16.23■□□□□ 0.19
CDCA7-208ENST00000496441 DENND4BO75064 1496 aaPredicted RBP16.19■□□□□ 0.18
CDCA7-208ENST00000496441 TCOF1Q13428 1488 aaKnown RBP16.19■□□□□ 0.18
CDCA7-208ENST00000496441 POLR3GLQ9BT43 218 aa16.19■□□□□ 0.18
CDCA7-208ENST00000496441 DAPK1P53355 1430 aa16.19■□□□□ 0.18
CDCA7-208ENST00000496441 MIA2Q96PC5 1412 aa16.19■□□□□ 0.18
CDCA7-208ENST00000496441 RAPGEF6Q8TEU7 1601 aa16.18■□□□□ 0.18
CDCA7-208ENST00000496441 ABCC5O15440 1437 aa16.17■□□□□ 0.18
CDCA7-208ENST00000496441 CEP170Q5SW79 1584 aa16.17■□□□□ 0.18
CDCA7-208ENST00000496441 EIF4G2P78344 907 aaKnown RBP eCLIP16.16■□□□□ 0.18
CDCA7-208ENST00000496441 FKBP8Q14318 412 aa16.16■□□□□ 0.18
CDCA7-208ENST00000496441 WASHC2AQ641Q2 1341 aa16.15■□□□□ 0.18
CDCA7-208ENST00000496441 PLEKHD1A6NEE1 506 aa16.15■□□□□ 0.18
CDCA7-208ENST00000496441 SYNJ2O15056 1496 aa16.14■□□□□ 0.17
CDCA7-208ENST00000496441 NBPF8Q3BBV2 869 aa16.14■□□□□ 0.17
CDCA7-208ENST00000496441 GCC2Q8IWJ2 1684 aa16.14■□□□□ 0.17
CDCA7-208ENST00000496441 C11orf95C9JLR9 678 aaPredicted RBP16.12■□□□□ 0.17
CDCA7-208ENST00000496441 CARMIL2Q6F5E8 1435 aa16.12■□□□□ 0.17
CDCA7-208ENST00000496441 KDM5BQ9UGL1 1544 aa16.12■□□□□ 0.17
CDCA7-208ENST00000496441 MAGI1Q96QZ7 1491 aaPredicted RBP16.12■□□□□ 0.17
CDCA7-208ENST00000496441 KIF14Q15058 1648 aa16.11■□□□□ 0.17
CDCA7-208ENST00000496441 TROQ12816 1431 aaPredicted RBP16.11■□□□□ 0.17
CDCA7-208ENST00000496441 HNRNPUQ00839 825 aaKnown RBP eCLIP16.1■□□□□ 0.17
CDCA7-208ENST00000496441 HNRNPMP52272 730 aaKnown RBP eCLIP16.1■□□□□ 0.17
CDCA7-208ENST00000496441 CAMSAP2Q08AD1 1489 aa16.09■□□□□ 0.17
CDCA7-208ENST00000496441 PKD2Q13563 968 aa16.09■□□□□ 0.17
CDCA7-208ENST00000496441 CCER2I3L3R5 266 aa16.08■□□□□ 0.16
CDCA7-208ENST00000496441 GPATCH8Q9UKJ3 1502 aaKnown RBP16.07■□□□□ 0.16
CDCA7-208ENST00000496441 SENP3-EIF4A1A0A087X0R7 540 aa16.07■□□□□ 0.16
CDCA7-208ENST00000496441 CCDC184Q52MB2 194 aa16.07■□□□□ 0.16
CDCA7-208ENST00000496441 ANKRD30BQ9BXX2 1392 aa16.07■□□□□ 0.16
CDCA7-208ENST00000496441 DNMT1P26358 1616 aaKnown RBP16.06■□□□□ 0.16
CDCA7-208ENST00000496441 KDM2AQ9Y2K7 1162 aa16.06■□□□□ 0.16
CDCA7-208ENST00000496441 FAM9BQ8IZU0 186 aa16.05■□□□□ 0.16
CDCA7-208ENST00000496441 AKNAQ7Z591 1439 aa16.05■□□□□ 0.16
CDCA7-208ENST00000496441 IRX6P78412 446 aaPredicted RBP16.05■□□□□ 0.16
CDCA7-208ENST00000496441 ROCK1Q13464 1354 aa16.04■□□□□ 0.16
CDCA7-208ENST00000496441 NEFLP07196 543 aa16.04■□□□□ 0.16
CDCA7-208ENST00000496441 TSPY4P0CV99 314 aa16.04■□□□□ 0.16
CDCA7-208ENST00000496441 TSPY10P0CW01 314 aa16.04■□□□□ 0.16
CDCA7-208ENST00000496441 NCOA1Q15788 1441 aa16.03■□□□□ 0.16
CDCA7-208ENST00000496441 NUP155O75694 1391 aa16.01■□□□□ 0.15
CDCA7-208ENST00000496441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.01■□□□□ 0.152e-7■■■■□ 20.8
CDCA7-208ENST00000496441 NUP160Q12769 1436 aa16■□□□□ 0.15
CDCA7-208ENST00000496441 ATP10BO94823 1461 aa16■□□□□ 0.15
CDCA7-208ENST00000496441 RPRD2Q5VT52 1461 aaKnown RBP16■□□□□ 0.15
CDCA7-208ENST00000496441 ANKRD30AQ9BXX3 1397 aa16■□□□□ 0.15
CDCA7-208ENST00000496441 PTPRGP23470 1445 aa15.99■□□□□ 0.15
CDCA7-208ENST00000496441 ANKRD50Q9ULJ7 1429 aa15.98■□□□□ 0.15
CDCA7-208ENST00000496441 PZPP20742 1482 aa15.97■□□□□ 0.15
CDCA7-208ENST00000496441 MRS2Q9HD23 443 aa15.97■□□□□ 0.15
CDCA7-208ENST00000496441 CCDC7Q96M83 1385 aa15.96■□□□□ 0.15
CDCA7-208ENST00000496441 KIF7Q2M1P5 1343 aa15.96■□□□□ 0.15
CDCA7-208ENST00000496441 ITSN2Q9NZM3 1697 aa15.95■□□□□ 0.14
CDCA7-208ENST00000496441 RGL3Q3MIN7 710 aa15.95■□□□□ 0.14
CDCA7-208ENST00000496441 TEX14Q8IWB6 1497 aa15.95■□□□□ 0.14
CDCA7-208ENST00000496441 PRKRIP1Q9H875 184 aaPredicted RBP15.94■□□□□ 0.14
CDCA7-208ENST00000496441 C9orf84Q5VXU9 1444 aa15.94■□□□□ 0.14
CDCA7-208ENST00000496441 DCAF11Q8TEB1 546 aa15.93■□□□□ 0.14
CDCA7-208ENST00000496441 TSHZ2Q9NRE2 1034 aa15.92■□□□□ 0.14
CDCA7-208ENST00000496441 CNTLNQ9NXG0 1405 aa15.92■□□□□ 0.14
CDCA7-208ENST00000496441 CDC42BPAQ5VT25 1732 aa15.91■□□□□ 0.14
CDCA7-208ENST00000496441 KIAA1107Q9UPP5 1409 aa15.91■□□□□ 0.14
CDCA7-208ENST00000496441 KIF15Q9NS87 1388 aa15.91■□□□□ 0.14
CDCA7-208ENST00000496441 CARD11Q9BXL7 1154 aa15.9■□□□□ 0.14
CDCA7-208ENST00000496441 ABCA8O94911 1581 aa15.89■□□□□ 0.13
CDCA7-208ENST00000496441 USP47Q96K76 1375 aa15.88■□□□□ 0.13
CDCA7-208ENST00000496441 ADGBQ8N7X0 1667 aa15.88■□□□□ 0.13
CDCA7-208ENST00000496441 ABCC10Q5T3U5 1492 aa15.87■□□□□ 0.13
CDCA7-208ENST00000496441 ADCY10Q96PN6 1610 aa15.85■□□□□ 0.13
CDCA7-208ENST00000496441 ST20-MTHFSA0A0A6YYL1 179 aa15.84■□□□□ 0.13
CDCA7-208ENST00000496441 CHD1O14646 1710 aa15.84■□□□□ 0.13
CDCA7-208ENST00000496441 ERCC6L2Q5T890 1561 aa15.84■□□□□ 0.13
CDCA7-208ENST00000496441 CROCC2H7BZ55 1655 aa15.84■□□□□ 0.13
CDCA7-208ENST00000496441 ADGRL2O95490 1459 aa15.83■□□□□ 0.13
CDCA7-208ENST00000496441 SPATA31E1Q6ZUB1 1445 aa15.83■□□□□ 0.12
CDCA7-208ENST00000496441 MYT1LQ9UL68 1186 aa15.81■□□□□ 0.12
CDCA7-208ENST00000496441 ARHGAP5Q13017 1502 aa15.81■□□□□ 0.12
CDCA7-208ENST00000496441 SYCP2Q9BX26 1530 aa15.78■□□□□ 0.12
CDCA7-208ENST00000496441 MBD5Q9P267 1494 aa15.78■□□□□ 0.12
CDCA7-208ENST00000496441 NBPF1Q3BBV0 1214 aa15.78■□□□□ 0.12
CDCA7-208ENST00000496441 SAMD9LQ8IVG5 1584 aa15.77■□□□□ 0.12
CDCA7-208ENST00000496441 CDC42BPBQ9Y5S2 1711 aa15.77■□□□□ 0.12
CDCA7-208ENST00000496441 SALL2Q9Y467 1007 aaPredicted RBP15.77■□□□□ 0.12
CDCA7-208ENST00000496441 BCORL1Q5H9F3 1711 aa15.77■□□□□ 0.11
CDCA7-208ENST00000496441 CCDC141Q6ZP82 1450 aa15.77■□□□□ 0.11
CDCA7-208ENST00000496441 ROCK2O75116 1388 aaKnown RBP15.76■□□□□ 0.11
CDCA7-208ENST00000496441 TTC37Q6PGP7 1564 aa15.75■□□□□ 0.11
CDCA7-208ENST00000496441 TMC1Q8TDI8 760 aa15.74■□□□□ 0.11
CDCA7-208ENST00000496441 CCDC144AA2RUR9 1427 aa15.73■□□□□ 0.11
CDCA7-208ENST00000496441 SHANK2Q9UPX8 1470 aa15.73■□□□□ 0.11
CDCA7-208ENST00000496441 AFAP1Q8N556 730 aa15.73■□□□□ 0.11
CDCA7-208ENST00000496441 PLEKHH2Q8IVE3 1493 aa15.72■□□□□ 0.11
CDCA7-208ENST00000496441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.71■□□□□ 0.111e-11■■■□□ 19.1
CDCA7-208ENST00000496441 FAM135AQ9P2D6 1515 aa15.71■□□□□ 0.11
CDCA7-208ENST00000496441 DHX29Q7Z478 1369 aaKnown RBP15.71■□□□□ 0.1
CDCA7-208ENST00000496441 RSPH4AQ5TD94 716 aa15.7■□□□□ 0.1
CDCA7-208ENST00000496441 B4GALNT3Q6L9W6 998 aa15.7■□□□□ 0.1
CDCA7-208ENST00000496441 PREX2Q70Z35 1606 aa15.69■□□□□ 0.1
CDCA7-208ENST00000496441 KDM5CP41229 1560 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms