RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 MKRN4PQ13434 485 aaPredicted RBP12.18□□□□□ -0.46
CHCHD3-206ENST00000496427 CFAP43Q8NDM7 1665 aa12.16□□□□□ -0.46
CHCHD3-206ENST00000496427 EVX2Q03828 476 aa12.16□□□□□ -0.46
CHCHD3-206ENST00000496427 ILDR1Q86SU0 546 aaPredicted RBP12.15□□□□□ -0.46
CHCHD3-206ENST00000496427 KIF21BO75037 1637 aa12.15□□□□□ -0.47
CHCHD3-206ENST00000496427 TEX14Q8IWB6 1497 aa12.14□□□□□ -0.47
CHCHD3-206ENST00000496427 RAPGEF2Q9Y4G8 1499 aa12.14□□□□□ -0.47
CHCHD3-206ENST00000496427 WDR7Q9Y4E6 1490 aa12.12□□□□□ -0.47
CHCHD3-206ENST00000496427 ABCA8O94911 1581 aa12.1□□□□□ -0.47
CHCHD3-206ENST00000496427 C19orf67A6NJJ6 358 aa12.1□□□□□ -0.47
CHCHD3-206ENST00000496427 MAGI3Q5TCQ9 1506 aa12.05□□□□□ -0.48
CHCHD3-206ENST00000496427 CD109Q6YHK3 1445 aa12.03□□□□□ -0.48
CHCHD3-206ENST00000496427 GOLGA3Q08378 1498 aa12.02□□□□□ -0.48
CHCHD3-206ENST00000496427 PRR29P0C7W0 189 aa12.02□□□□□ -0.49
CHCHD3-206ENST00000496427 KCNH8Q96L42 1107 aa12.01□□□□□ -0.49
CHCHD3-206ENST00000496427 ABCA9Q8IUA7 1624 aa12□□□□□ -0.49
CHCHD3-206ENST00000496427 ARID3CA6NKF2 412 aa11.99□□□□□ -0.49
CHCHD3-206ENST00000496427 ADAMTSL3P82987 1691 aa11.99□□□□□ -0.49
CHCHD3-206ENST00000496427 FRMPD1Q5SYB0 1578 aa11.98□□□□□ -0.49
CHCHD3-206ENST00000496427 RAPGEF6Q8TEU7 1601 aa11.97□□□□□ -0.49
CHCHD3-206ENST00000496427 PRXQ9BXM0 1461 aa11.97□□□□□ -0.49
CHCHD3-206ENST00000496427 GABBR2O75899 941 aa11.97□□□□□ -0.49
CHCHD3-206ENST00000496427 BCORL1Q5H9F3 1711 aa11.97□□□□□ -0.49
CHCHD3-206ENST00000496427 MADDQ8WXG6 1647 aa11.97□□□□□ -0.49
CHCHD3-206ENST00000496427 SAMD9Q5K651 1589 aa11.96□□□□□ -0.49
CHCHD3-206ENST00000496427 CHADLQ6NUI6 762 aa11.96□□□□□ -0.49
CHCHD3-206ENST00000496427 ARAP3Q8WWN8 1544 aa11.96□□□□□ -0.5
CHCHD3-206ENST00000496427 RIMS1Q86UR5 1692 aaKnown RBP11.95□□□□□ -0.5
CHCHD3-206ENST00000496427 ATP10BO94823 1461 aa11.95□□□□□ -0.5
CHCHD3-206ENST00000496427 P3H3Q8IVL6 736 aa11.94□□□□□ -0.5
CHCHD3-206ENST00000496427 RICTORQ6R327 1708 aa11.93□□□□□ -0.5
CHCHD3-206ENST00000496427 SIGLEC1Q9BZZ2 1709 aa11.91□□□□□ -0.5
CHCHD3-206ENST00000496427 PTPRMP28827 1452 aa11.91□□□□□ -0.5
CHCHD3-206ENST00000496427 ARHGEF40Q8TER5 1519 aa11.9□□□□□ -0.5
CHCHD3-206ENST00000496427 CLCN6P51797 869 aa11.88□□□□□ -0.51
CHCHD3-206ENST00000496427 PCF11O94913 1555 aaKnown RBP11.88□□□□□ -0.51
CHCHD3-206ENST00000496427 RAPGEF3O95398 923 aa11.87□□□□□ -0.51
CHCHD3-206ENST00000496427 NEO1Q92859 1461 aa11.87□□□□□ -0.51
CHCHD3-206ENST00000496427 TTC37Q6PGP7 1564 aa11.87□□□□□ -0.51
CHCHD3-206ENST00000496427 NUP153P49790 1475 aaKnown RBP11.86□□□□□ -0.51
CHCHD3-206ENST00000496427 CFAP74Q9C0B2 1584 aa11.86□□□□□ -0.51
CHCHD3-206ENST00000496427 FER1L4A9Z1Z3 1794 aa11.86□□□□□ -0.51
CHCHD3-206ENST00000496427 LMTK3Q96Q04 1460 aa11.84□□□□□ -0.51
CHCHD3-206ENST00000496427 LHX8Q68G74 356 aa11.84□□□□□ -0.51
CHCHD3-206ENST00000496427 FHOD3Q2V2M9 1422 aa11.84□□□□□ -0.51
CHCHD3-206ENST00000496427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.82□□□□□ -0.524e-6■■■□□ 15.9
CHCHD3-206ENST00000496427 RANGAP1P46060 587 aaPredicted RBP11.82□□□□□ -0.52
CHCHD3-206ENST00000496427 FBXO41Q8TF61 875 aa11.82□□□□□ -0.52
CHCHD3-206ENST00000496427 FARP1Q9Y4F1 1045 aaPredicted RBP11.82□□□□□ -0.52
CHCHD3-206ENST00000496427 PHLDB1Q86UU1 1377 aa11.81□□□□□ -0.52
CHCHD3-206ENST00000496427 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
CHCHD3-206ENST00000496427 ARID4BQ4LE39 1312 aaPredicted RBP11.81□□□□□ -0.52
CHCHD3-206ENST00000496427 ZMYM4Q5VZL5 1548 aa11.8□□□□□ -0.52
CHCHD3-206ENST00000496427 MYO5CQ9NQX4 1742 aa11.8□□□□□ -0.52
CHCHD3-206ENST00000496427 DENND4BO75064 1496 aaPredicted RBP11.79□□□□□ -0.52
CHCHD3-206ENST00000496427 CDK13Q14004 1512 aaKnown RBP11.79□□□□□ -0.52
CHCHD3-206ENST00000496427 ZFYVE16Q7Z3T8 1539 aa11.79□□□□□ -0.52
CHCHD3-206ENST00000496427 HECW1Q76N89 1606 aa11.78□□□□□ -0.52
CHCHD3-206ENST00000496427 FANCAO15360 1455 aa11.78□□□□□ -0.52
CHCHD3-206ENST00000496427 AKNAQ7Z591 1439 aa11.77□□□□□ -0.52
CHCHD3-206ENST00000496427 YEATS2Q9ULM3 1422 aa11.77□□□□□ -0.52
CHCHD3-206ENST00000496427 LRRIQ1Q96JM4 1722 aa11.77□□□□□ -0.52
CHCHD3-206ENST00000496427 EFCAB5A4FU69 1503 aa11.77□□□□□ -0.52
CHCHD3-206ENST00000496427 FAM9AQ8IZU1 332 aaPredicted RBP11.77□□□□□ -0.53
CHCHD3-206ENST00000496427 CSRNP3Q8WYN3 585 aa11.76□□□□□ -0.53
CHCHD3-206ENST00000496427 PREX1Q8TCU6 1659 aa11.75□□□□□ -0.53
CHCHD3-206ENST00000496427 HSPA2P54652 639 aa11.75□□□□□ -0.53
CHCHD3-206ENST00000496427 STAG3Q9UJ98 1225 aa11.74□□□□□ -0.53
CHCHD3-206ENST00000496427 KIF14Q15058 1648 aa11.74□□□□□ -0.53
CHCHD3-206ENST00000496427 MLECQ14165 292 aa11.71□□□□□ -0.53
CHCHD3-206ENST00000496427 STRCQ7RTU9 1775 aa11.71□□□□□ -0.54
CHCHD3-206ENST00000496427 POGZQ7Z3K3 1410 aa11.7□□□□□ -0.54
CHCHD3-206ENST00000496427 PLEKHD1A6NEE1 506 aa11.7□□□□□ -0.54
CHCHD3-206ENST00000496427 EEA1Q15075 1411 aa11.69□□□□□ -0.54
CHCHD3-206ENST00000496427 CDC42BPBQ9Y5S2 1711 aa11.69□□□□□ -0.54
CHCHD3-206ENST00000496427 ARHGEF12Q9NZN5 1544 aa11.69□□□□□ -0.54
CHCHD3-206ENST00000496427 MAGI2Q86UL8 1455 aa11.68□□□□□ -0.54
CHCHD3-206ENST00000496427 C3P01024 1663 aa11.68□□□□□ -0.54
CHCHD3-206ENST00000496427 SCAPERQ9BY12 1400 aa11.68□□□□□ -0.54
CHCHD3-206ENST00000496427 ABCA6Q8N139 1617 aa11.67□□□□□ -0.54
CHCHD3-206ENST00000496427 EHMT2Q96KQ7 1210 aa11.66□□□□□ -0.54
CHCHD3-206ENST00000496427 C9orf84Q5VXU9 1444 aa11.66□□□□□ -0.54
CHCHD3-206ENST00000496427 DIP2CQ9Y2E4 1556 aa11.66□□□□□ -0.54
CHCHD3-206ENST00000496427 ITSN2Q9NZM3 1697 aa11.65□□□□□ -0.54
CHCHD3-206ENST00000496427 POTEIP0CG38 1075 aa11.65□□□□□ -0.54
CHCHD3-206ENST00000496427 ZNF579Q8NAF0 562 aaKnown RBP11.65□□□□□ -0.54
CHCHD3-206ENST00000496427 PLCH2O75038 1416 aa11.65□□□□□ -0.54
CHCHD3-206ENST00000496427 KDM5CP41229 1560 aa11.65□□□□□ -0.54
CHCHD3-206ENST00000496427 DCBLD2Q96PD2 775 aa11.64□□□□□ -0.55
CHCHD3-206ENST00000496427 ARHGAP5Q13017 1502 aa11.64□□□□□ -0.55
CHCHD3-206ENST00000496427 PREX2Q70Z35 1606 aa11.64□□□□□ -0.55
CHCHD3-206ENST00000496427 ATP10AO60312 1499 aa11.63□□□□□ -0.55
CHCHD3-206ENST00000496427 SETD1BQ9UPS6 1966 aaKnown RBP11.63□□□□□ -0.55
CHCHD3-206ENST00000496427 CDC42BPAQ5VT25 1732 aa11.63□□□□□ -0.55
CHCHD3-206ENST00000496427 ARHGAP35Q9NRY4 1499 aa11.63□□□□□ -0.55
CHCHD3-206ENST00000496427 CERKQ8TCT0 537 aa11.62□□□□□ -0.55
CHCHD3-206ENST00000496427 ATP1B4Q9UN42 357 aaPredicted RBP11.62□□□□□ -0.55
CHCHD3-206ENST00000496427 CEBPAP49715 358 aaPredicted RBP11.61□□□□□ -0.55
CHCHD3-206ENST00000496427 KIDINS220Q9ULH0 1771 aa11.6□□□□□ -0.55
CHCHD3-206ENST00000496427 ZNF518AQ6AHZ1 1483 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms