RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 ZNF644Q9H582 1327 aaPredicted RBP31.12■■■□□ 2.57
FGFR1-223ENST00000496296 ZNF777Q9ULD5 760 aaPredicted RBP31.12■■■□□ 2.57
FGFR1-223ENST00000496296 HFM1A2PYH4 1435 aa31.1■■■□□ 2.57
FGFR1-223ENST00000496296 DAPK1P53355 1430 aa31.09■■■□□ 2.57
FGFR1-223ENST00000496296 KCNH8Q96L42 1107 aa31.09■■■□□ 2.57
FGFR1-223ENST00000496296 DNMT1P26358 1616 aaKnown RBP31.09■■■□□ 2.57
FGFR1-223ENST00000496296 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.08■■■□□ 2.57
FGFR1-223ENST00000496296 NPM1P06748 294 aaKnown RBP eCLIP31.08■■■□□ 2.57
FGFR1-223ENST00000496296 PREX2Q70Z35 1606 aa31.05■■■□□ 2.56
FGFR1-223ENST00000496296 ZNF316A6NFI3 1004 aaPredicted RBP31.05■■■□□ 2.56
FGFR1-223ENST00000496296 AKNAQ7Z591 1439 aa31.04■■■□□ 2.56
FGFR1-223ENST00000496296 TTC37Q6PGP7 1564 aa31.04■■■□□ 2.56
FGFR1-223ENST00000496296 ABCC5O15440 1437 aa31.04■■■□□ 2.56
FGFR1-223ENST00000496296 CHIC2Q9UKJ5 165 aa31.04■■■□□ 2.56
FGFR1-223ENST00000496296 WDR7Q9Y4E6 1490 aa31.03■■■□□ 2.56
FGFR1-223ENST00000496296 NAIPQ13075 1403 aa31.01■■■□□ 2.55
FGFR1-223ENST00000496296 ROCK1Q13464 1354 aa30.99■■■□□ 2.55
FGFR1-223ENST00000496296 MYO5CQ9NQX4 1742 aa30.99■■■□□ 2.55
FGFR1-223ENST00000496296 CDC42BPBQ9Y5S2 1711 aa30.99■■■□□ 2.55
FGFR1-223ENST00000496296 DIEXFQ68CQ4 756 aaKnown RBP30.97■■■□□ 2.55
FGFR1-223ENST00000496296 ARHGAP5Q13017 1502 aa30.97■■■□□ 2.55
FGFR1-223ENST00000496296 RRP7BPQ9NSQ0 103 aa30.96■■■□□ 2.55
FGFR1-223ENST00000496296 ASXL2Q76L83 1435 aa30.95■■■□□ 2.55
FGFR1-223ENST00000496296 GCC2Q8IWJ2 1684 aa30.94■■■□□ 2.54
FGFR1-223ENST00000496296 PLCH2O75038 1416 aa30.93■■■□□ 2.54
FGFR1-223ENST00000496296 SAMD9LQ8IVG5 1584 aa30.9■■■□□ 2.54
FGFR1-223ENST00000496296 CROCC2H7BZ55 1655 aa30.9■■■□□ 2.54
FGFR1-223ENST00000496296 RSPH4AQ5TD94 716 aa30.89■■■□□ 2.54
FGFR1-223ENST00000496296 ARHGEF5Q12774 1597 aa30.88■■■□□ 2.53
FGFR1-223ENST00000496296 PLEKHH2Q8IVE3 1493 aa30.88■■■□□ 2.53
FGFR1-223ENST00000496296 MAPKBP1O60336 1514 aa30.88■■■□□ 2.53
FGFR1-223ENST00000496296 ACIN1Q9UKV3 1341 aaKnown RBP30.87■■■□□ 2.53
FGFR1-223ENST00000496296 SHANK2Q9UPX8 1470 aa30.87■■■□□ 2.53
FGFR1-223ENST00000496296 ADGBQ8N7X0 1667 aa30.86■■■□□ 2.53
FGFR1-223ENST00000496296 TSPY4P0CV99 314 aa30.86■■■□□ 2.53
FGFR1-223ENST00000496296 TSPY10P0CW01 314 aa30.86■■■□□ 2.53
FGFR1-223ENST00000496296 EFCAB2Q5VUJ9 269 aa30.86■■■□□ 2.53
FGFR1-223ENST00000496296 HNRNPMP52272 730 aaKnown RBP eCLIP30.84■■■□□ 2.53
FGFR1-223ENST00000496296 ARAP3Q8WWN8 1544 aa30.84■■■□□ 2.53
FGFR1-223ENST00000496296 ADGRL2O95490 1459 aa30.84■■■□□ 2.53
FGFR1-223ENST00000496296 ANKRD30AQ9BXX3 1397 aa30.83■■■□□ 2.53
FGFR1-223ENST00000496296 MBD5Q9P267 1494 aa30.83■■■□□ 2.53
FGFR1-223ENST00000496296 ABCA9Q8IUA7 1624 aa30.83■■■□□ 2.53
FGFR1-223ENST00000496296 CCDC141Q6ZP82 1450 aa30.82■■■□□ 2.52
FGFR1-223ENST00000496296 KIAA1107Q9UPP5 1409 aa30.82■■■□□ 2.52
FGFR1-223ENST00000496296 NCOA1Q15788 1441 aa30.81■■■□□ 2.52
FGFR1-223ENST00000496296 C9orf84Q5VXU9 1444 aa30.8■■■□□ 2.52
FGFR1-223ENST00000496296 SYCP2Q9BX26 1530 aa30.79■■■□□ 2.52
FGFR1-223ENST00000496296 FAM69CQ0P6D2 419 aa30.76■■■□□ 2.52
FGFR1-223ENST00000496296 KDM6BO15054 1643 aa30.72■■■□□ 2.51
FGFR1-223ENST00000496296 TRIM52Q96A61 297 aa30.72■■■□□ 2.51
FGFR1-223ENST00000496296 KIF13AQ9H1H9 1805 aa30.71■■■□□ 2.51
FGFR1-223ENST00000496296 ABCC1P33527 1531 aa30.69■■■□□ 2.5
FGFR1-223ENST00000496296 FANCAO15360 1455 aa30.68■■■□□ 2.5
FGFR1-223ENST00000496296 MAST1Q9Y2H9 1570 aa30.67■■■□□ 2.5
FGFR1-223ENST00000496296 DIP2BQ9P265 1576 aa30.66■■■□□ 2.5
FGFR1-223ENST00000496296 ARHGEF12Q9NZN5 1544 aa30.65■■■□□ 2.5
FGFR1-223ENST00000496296 ANKRD50Q9ULJ7 1429 aa30.63■■■□□ 2.49
FGFR1-223ENST00000496296 KIF15Q9NS87 1388 aa30.62■■■□□ 2.49
FGFR1-223ENST00000496296 CD109Q6YHK3 1445 aa30.62■■■□□ 2.49
FGFR1-223ENST00000496296 TIMELESSQ9UNS1 1208 aa30.57■■■□□ 2.48
FGFR1-223ENST00000496296 TRAPPC8Q9Y2L5 1435 aa30.56■■■□□ 2.48
FGFR1-223ENST00000496296 ADGRL1O94910 1474 aa30.56■■■□□ 2.48
FGFR1-223ENST00000496296 MPHOSPH9Q99550 1183 aa30.55■■■□□ 2.48
FGFR1-223ENST00000496296 CFAP74Q9C0B2 1584 aa30.55■■■□□ 2.48
FGFR1-223ENST00000496296 PLXNC1O60486 1568 aa30.55■■■□□ 2.48
FGFR1-223ENST00000496296 SCAPERQ9BY12 1400 aa30.51■■■□□ 2.48
FGFR1-223ENST00000496296 SPAG9O60271 1321 aaKnown RBP30.5■■■□□ 2.47
FGFR1-223ENST00000496296 RTEL1-TNFRSF6BF6WH68 1400 aa30.49■■■□□ 2.47
FGFR1-223ENST00000496296 SIN3AQ96ST3 1273 aa30.49■■■□□ 2.47
FGFR1-223ENST00000496296 NEUROD1Q13562 356 aa30.48■■■□□ 2.47
FGFR1-223ENST00000496296 GLI2P10070 1586 aa30.48■■■□□ 2.47
FGFR1-223ENST00000496296 AFAP1Q8N556 730 aa30.48■■■□□ 2.47
FGFR1-223ENST00000496296 SLC4A1APQ9BWU0 796 aaKnown RBP30.47■■■□□ 2.47
FGFR1-223ENST00000496296 TSPOAP1O95153 1857 aa30.46■■■□□ 2.47
FGFR1-223ENST00000496296 DUOX2Q9NRD8 1548 aa30.46■■■□□ 2.47
FGFR1-223ENST00000496296 DENND4BO75064 1496 aaPredicted RBP30.44■■■□□ 2.46
FGFR1-223ENST00000496296 MAP3K4Q9Y6R4 1608 aa30.42■■■□□ 2.46
FGFR1-223ENST00000496296 NEO1Q92859 1461 aa30.42■■■□□ 2.46
FGFR1-223ENST00000496296 PZPP20742 1482 aa30.41■■■□□ 2.46
FGFR1-223ENST00000496296 NUP155O75694 1391 aa30.4■■■□□ 2.46
FGFR1-223ENST00000496296 ZFYVE16Q7Z3T8 1539 aa30.4■■■□□ 2.46
FGFR1-223ENST00000496296 ERBINQ96RT1 1412 aa30.4■■■□□ 2.46
FGFR1-223ENST00000496296 ZNF518AQ6AHZ1 1483 aa30.4■■■□□ 2.46
FGFR1-223ENST00000496296 KDM5DQ9BY66 1539 aa30.38■■■□□ 2.45
FGFR1-223ENST00000496296 ATP7AQ04656 1500 aa30.37■■■□□ 2.45
FGFR1-223ENST00000496296 MYT1LQ9UL68 1186 aa30.37■■■□□ 2.45
FGFR1-223ENST00000496296 INO80Q9ULG1 1556 aaPredicted RBP30.36■■■□□ 2.45
FGFR1-223ENST00000496296 TONSLQ96HA7 1378 aa30.34■■■□□ 2.45
FGFR1-223ENST00000496296 MIER1Q8N108 512 aa30.34■■■□□ 2.45
FGFR1-223ENST00000496296 PPRC1Q5VV67 1664 aaKnown RBP30.34■■■□□ 2.45
FGFR1-223ENST00000496296 POGZQ7Z3K3 1410 aa30.32■■■□□ 2.44
FGFR1-223ENST00000496296 CENPBP07199 599 aaPredicted RBP30.32■■■□□ 2.44
FGFR1-223ENST00000496296 FOXD1Q16676 465 aa30.31■■■□□ 2.44
FGFR1-223ENST00000496296 UNC13BO14795 1591 aa30.3■■■□□ 2.44
FGFR1-223ENST00000496296 ANKRD30BQ9BXX2 1392 aa30.3■■■□□ 2.44
FGFR1-223ENST00000496296 PKD2Q13563 968 aa30.29■■■□□ 2.44
FGFR1-223ENST00000496296 KDM5CP41229 1560 aa30.27■■■□□ 2.44
FGFR1-223ENST00000496296 SCAF1Q9H7N4 1312 aaKnown RBP30.26■■■□□ 2.43
FGFR1-223ENST00000496296 FAM135AQ9P2D6 1515 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms