RNA–Protein interactions for RNA: ENST00000496238.5

POLR1B-214, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 587 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-214ENST00000496238 KIF14Q15058 1648 aa30.05■■■□□ 2.4
POLR1B-214ENST00000496238 MYO5CQ9NQX4 1742 aa30.04■■■□□ 2.4
POLR1B-214ENST00000496238 LRRIQ1Q96JM4 1722 aa30.02■■■□□ 2.4
POLR1B-214ENST00000496238 EFCAB2Q5VUJ9 269 aa30.01■■■□□ 2.39
POLR1B-214ENST00000496238 ILDR1Q86SU0 546 aaPredicted RBP30.01■■■□□ 2.39
POLR1B-214ENST00000496238 CLIP1P30622 1438 aa30■■■□□ 2.39
POLR1B-214ENST00000496238 SIGLEC1Q9BZZ2 1709 aa29.99■■■□□ 2.39
POLR1B-214ENST00000496238 CASKIN1Q8WXD9 1431 aa29.96■■■□□ 2.39
POLR1B-214ENST00000496238 RIMS1Q86UR5 1692 aaKnown RBP29.95■■■□□ 2.39
POLR1B-214ENST00000496238 PCF11O94913 1555 aaKnown RBP29.95■■■□□ 2.39
POLR1B-214ENST00000496238 CCDC18Q5T9S5 1454 aa29.93■■■□□ 2.38
POLR1B-214ENST00000496238 ARHGAP5Q13017 1502 aa29.93■■■□□ 2.38
POLR1B-214ENST00000496238 ZNF518AQ6AHZ1 1483 aa29.91■■■□□ 2.38
POLR1B-214ENST00000496238 ATP10AO60312 1499 aa29.89■■■□□ 2.38
POLR1B-214ENST00000496238 LMTK3Q96Q04 1460 aa29.89■■■□□ 2.38
POLR1B-214ENST00000496238 C9orf84Q5VXU9 1444 aa29.87■■■□□ 2.37
POLR1B-214ENST00000496238 KDM5CP41229 1560 aa29.86■■■□□ 2.37
POLR1B-214ENST00000496238 FYCO1Q9BQS8 1478 aa29.86■■■□□ 2.37
POLR1B-214ENST00000496238 CDC42BPBQ9Y5S2 1711 aa29.84■■■□□ 2.37
POLR1B-214ENST00000496238 AFAP1Q8N556 730 aa29.83■■■□□ 2.37
POLR1B-214ENST00000496238 PREX2Q70Z35 1606 aa29.82■■■□□ 2.36
POLR1B-214ENST00000496238 MLECQ14165 292 aa29.82■■■□□ 2.36
POLR1B-214ENST00000496238 ARHGEF12Q9NZN5 1544 aa29.8■■■□□ 2.36
POLR1B-214ENST00000496238 FER1L4A9Z1Z3 1794 aa29.8■■■□□ 2.36
POLR1B-214ENST00000496238 ABCC1P33527 1531 aa29.76■■■□□ 2.36
POLR1B-214ENST00000496238 MLH3Q9UHC1 1453 aa29.74■■■□□ 2.35
POLR1B-214ENST00000496238 DIP2CQ9Y2E4 1556 aa29.74■■■□□ 2.35
POLR1B-214ENST00000496238 PLPPR3Q6T4P5 718 aa29.74■■■□□ 2.35
POLR1B-214ENST00000496238 TRAPPC8Q9Y2L5 1435 aa29.72■■■□□ 2.35
POLR1B-214ENST00000496238 REREQ9P2R6 1566 aa29.72■■■□□ 2.35
POLR1B-214ENST00000496238 CDC42BPAQ5VT25 1732 aa29.71■■■□□ 2.35
POLR1B-214ENST00000496238 ITSN2Q9NZM3 1697 aa29.69■■■□□ 2.34
POLR1B-214ENST00000496238 ABCA6Q8N139 1617 aa29.69■■■□□ 2.34
POLR1B-214ENST00000496238 MYT1LQ9UL68 1186 aa29.68■■■□□ 2.34
POLR1B-214ENST00000496238 HSPA2P54652 639 aa29.67■■■□□ 2.34
POLR1B-214ENST00000496238 GPATCH8Q9UKJ3 1502 aaKnown RBP29.63■■■□□ 2.33
POLR1B-214ENST00000496238 AGLP35573 1532 aa29.61■■■□□ 2.33
POLR1B-214ENST00000496238 SAMD9LQ8IVG5 1584 aa29.6■■■□□ 2.33
POLR1B-214ENST00000496238 KIDINS220Q9ULH0 1771 aa29.59■■■□□ 2.33
POLR1B-214ENST00000496238 CEBPAP49715 358 aaPredicted RBP29.59■■■□□ 2.33
POLR1B-214ENST00000496238 FBXO41Q8TF61 875 aa29.59■■■□□ 2.33
POLR1B-214ENST00000496238 PREX1Q8TCU6 1659 aa29.56■■■□□ 2.32
POLR1B-214ENST00000496238 SYCP2Q9BX26 1530 aa29.56■■■□□ 2.32
POLR1B-214ENST00000496238 ZNF777Q9ULD5 760 aaPredicted RBP29.56■■■□□ 2.32
POLR1B-214ENST00000496238 MTUS2Q5JR59 1369 aa29.53■■■□□ 2.32
POLR1B-214ENST00000496238 KIAA1107Q9UPP5 1409 aa29.52■■■□□ 2.32
POLR1B-214ENST00000496238 CCNB3Q8WWL7 1395 aa29.52■■■□□ 2.32
POLR1B-214ENST00000496238 CFDP1Q9UEE9 299 aaPredicted RBP29.5■■■□□ 2.31
POLR1B-214ENST00000496238 PLEKHH2Q8IVE3 1493 aa29.49■■■□□ 2.31
POLR1B-214ENST00000496238 CEP162Q5TB80 1403 aa29.49■■■□□ 2.31
POLR1B-214ENST00000496238 HNRNPMP52272 730 aaKnown RBP eCLIP29.49■■■□□ 2.31
POLR1B-214ENST00000496238 SPAG9O60271 1321 aaKnown RBP29.48■■■□□ 2.31
POLR1B-214ENST00000496238 UHRF1BP1Q6BDS2 1440 aa29.46■■■□□ 2.31
POLR1B-214ENST00000496238 C3P01024 1663 aa29.46■■■□□ 2.31
POLR1B-214ENST00000496238 EHBP1L1Q8N3D4 1523 aa29.45■■■□□ 2.3
POLR1B-214ENST00000496238 ESF1Q9H501 851 aaKnown RBP29.44■■■□□ 2.3
POLR1B-214ENST00000496238 ATP7AQ04656 1500 aa29.44■■■□□ 2.3
POLR1B-214ENST00000496238 CNTLNQ9NXG0 1405 aa29.44■■■□□ 2.3
POLR1B-214ENST00000496238 INO80Q9ULG1 1556 aaPredicted RBP29.43■■■□□ 2.3
POLR1B-214ENST00000496238 SETD1BQ9UPS6 1966 aaKnown RBP29.43■■■□□ 2.3
POLR1B-214ENST00000496238 TIAM1Q13009 1591 aa29.43■■■□□ 2.3
POLR1B-214ENST00000496238 PLXNC1O60486 1568 aa29.39■■■□□ 2.29
POLR1B-214ENST00000496238 STRCQ7RTU9 1775 aa29.36■■■□□ 2.29
POLR1B-214ENST00000496238 A2MP01023 1474 aa29.36■■■□□ 2.29
POLR1B-214ENST00000496238 ZNF644Q9H582 1327 aaPredicted RBP29.35■■■□□ 2.29
POLR1B-214ENST00000496238 SUPT6HQ7KZ85 1726 aaKnown RBP29.34■■■□□ 2.29
POLR1B-214ENST00000496238 MBD5Q9P267 1494 aa29.34■■■□□ 2.29
POLR1B-214ENST00000496238 MROH2AA6NES4 1674 aa29.34■■■□□ 2.29
POLR1B-214ENST00000496238 CERKQ8TCT0 537 aa29.32■■■□□ 2.28
POLR1B-214ENST00000496238 DMRT2Q9Y5R5 561 aa29.32■■■□□ 2.28
POLR1B-214ENST00000496238 NPATQ14207 1427 aa29.3■■■□□ 2.28
POLR1B-214ENST00000496238 ZMYM3Q14202 1370 aa29.28■■■□□ 2.28
POLR1B-214ENST00000496238 ADGBQ8N7X0 1667 aa29.26■■■□□ 2.27
POLR1B-214ENST00000496238 NCOA2Q15596 1464 aa29.26■■■□□ 2.27
POLR1B-214ENST00000496238 RTEL1-TNFRSF6BF6WH68 1400 aa29.26■■■□□ 2.27
POLR1B-214ENST00000496238 CLTCQ00610 1675 aaKnown RBP29.22■■■□□ 2.27
POLR1B-214ENST00000496238 PTPRTO14522 1441 aa29.22■■■□□ 2.27
POLR1B-214ENST00000496238 NCOA1Q15788 1441 aa29.2■■■□□ 2.27
POLR1B-214ENST00000496238 GGT6Q6P531 493 aa29.2■■■□□ 2.26
POLR1B-214ENST00000496238 CAMSAP2Q08AD1 1489 aa29.19■■■□□ 2.26
POLR1B-214ENST00000496238 CCDC141Q6ZP82 1450 aa29.19■■■□□ 2.26
POLR1B-214ENST00000496238 PPP6R1Q9UPN7 881 aa29.19■■■□□ 2.26
POLR1B-214ENST00000496238 VPS8Q8N3P4 1428 aa29.19■■■□□ 2.26
POLR1B-214ENST00000496238 DHX29Q7Z478 1369 aaKnown RBP29.17■■■□□ 2.26
POLR1B-214ENST00000496238 LOC105371045A0A1W2PR82 267 aa29.16■■■□□ 2.26
POLR1B-214ENST00000496238 PTPRKQ15262 1439 aa29.16■■■□□ 2.26
POLR1B-214ENST00000496238 CAMSAP1Q5T5Y3 1602 aa29.13■■■□□ 2.25
POLR1B-214ENST00000496238 LRRC9Q6ZRR7 1453 aa29.13■■■□□ 2.25
POLR1B-214ENST00000496238 RSPH4AQ5TD94 716 aa29.13■■■□□ 2.25
POLR1B-214ENST00000496238 MYO3AQ8NEV4 1616 aa29.12■■■□□ 2.25
POLR1B-214ENST00000496238 ZNF142P52746 1687 aaPredicted RBP29.11■■■□□ 2.25
POLR1B-214ENST00000496238 ARHGEF5Q12774 1597 aa29.09■■■□□ 2.25
POLR1B-214ENST00000496238 CEP170BQ9Y4F5 1589 aaPredicted RBP29.07■■■□□ 2.24
POLR1B-214ENST00000496238 MAP3K1Q13233 1512 aa29.05■■■□□ 2.24
POLR1B-214ENST00000496238 LTBP4Q8N2S1 1624 aa29.05■■■□□ 2.24
POLR1B-214ENST00000496238 PLA2R1Q13018 1463 aa29.04■■■□□ 2.24
POLR1B-214ENST00000496238 KIF3BO15066 747 aa29.04■■■□□ 2.24
POLR1B-214ENST00000496238 FAM135AQ9P2D6 1515 aa29.04■■■□□ 2.24
POLR1B-214ENST00000496238 KDM5DQ9BY66 1539 aa29.01■■■□□ 2.23
POLR1B-214ENST00000496238 NCKAP5LQ9HCH0 1330 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms