RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 PDE4AP27815 886 aa13.81□□□□□ -0.2
NCKAP1-208ENST00000495619 SNPHO15079 494 aa13.8□□□□□ -0.2
NCKAP1-208ENST00000495619 GPHNQ9NQX3 736 aaPredicted RBP13.76□□□□□ -0.21
NCKAP1-208ENST00000495619 C2orf72A6NCS6 295 aa13.75□□□□□ -0.21
NCKAP1-208ENST00000495619 TMEM92Q6UXU6 159 aa13.73□□□□□ -0.21
NCKAP1-208ENST00000495619 HAP1P54257 671 aaPredicted RBP13.72□□□□□ -0.21
NCKAP1-208ENST00000495619 KIF3CO14782 793 aa13.71□□□□□ -0.21
NCKAP1-208ENST00000495619 CRISPLD2Q9H0B8 497 aa13.71□□□□□ -0.21
NCKAP1-208ENST00000495619 LARP6Q9BRS8 491 aaKnown RBP13.7□□□□□ -0.22
NCKAP1-208ENST00000495619 TSHZ2Q9NRE2 1034 aa13.69□□□□□ -0.22
NCKAP1-208ENST00000495619 WDR70Q9NW82 654 aa13.69□□□□□ -0.22
NCKAP1-208ENST00000495619 FOXK1P85037 733 aa13.68□□□□□ -0.22
NCKAP1-208ENST00000495619 DOK7Q18PE1 504 aa13.68□□□□□ -0.22
NCKAP1-208ENST00000495619 CADPS2Q86UW7 1296 aa13.68□□□□□ -0.22
NCKAP1-208ENST00000495619 RIMBP2O15034 1052 aa13.67□□□□□ -0.22
NCKAP1-208ENST00000495619 DDX27Q96GQ7 796 aaKnown RBP13.67□□□□□ -0.22
NCKAP1-208ENST00000495619 NCKAP5LQ9HCH0 1330 aa13.66□□□□□ -0.22
NCKAP1-208ENST00000495619 ZNF710Q8N1W2 664 aa13.65□□□□□ -0.22
NCKAP1-208ENST00000495619 PPP1R15BQ5SWA1 713 aa13.64□□□□□ -0.23
NCKAP1-208ENST00000495619 PLPP6Q8IY26 295 aa13.64□□□□□ -0.23
NCKAP1-208ENST00000495619 DSG2Q14126 1118 aa13.63□□□□□ -0.23
NCKAP1-208ENST00000495619 MFSD10Q14728 455 aa13.61□□□□□ -0.23
NCKAP1-208ENST00000495619 FAM163AQ96GL9 167 aaPredicted RBP13.59□□□□□ -0.23
NCKAP1-208ENST00000495619 ZSWIM6Q9HCJ5 1215 aa13.57□□□□□ -0.24
NCKAP1-208ENST00000495619 TBC1D12O60347 775 aa13.56□□□□□ -0.24
NCKAP1-208ENST00000495619 SLC34A2O95436 690 aa13.55□□□□□ -0.24
NCKAP1-208ENST00000495619 HOXB3P14651 431 aaPredicted RBP13.54□□□□□ -0.24
NCKAP1-208ENST00000495619 VSIG10Q8N0Z9 540 aa13.52□□□□□ -0.25
NCKAP1-208ENST00000495619 E2F4Q16254 413 aa13.49□□□□□ -0.25
NCKAP1-208ENST00000495619 ST18O60284 1047 aa13.48□□□□□ -0.25
NCKAP1-208ENST00000495619 PTCD2Q8WV60 388 aaKnown RBP13.48□□□□□ -0.25
NCKAP1-208ENST00000495619 ZNF316A6NFI3 1004 aaPredicted RBP13.46□□□□□ -0.25
NCKAP1-208ENST00000495619 PCDHGA4Q9Y5G9 962 aa13.46□□□□□ -0.25
NCKAP1-208ENST00000495619 HOXB1P14653 301 aaPredicted RBP13.45□□□□□ -0.26
NCKAP1-208ENST00000495619 MAP3K9P80192 1104 aa13.45□□□□□ -0.26
NCKAP1-208ENST00000495619 CAMK2BQ13554 666 aa13.44□□□□□ -0.26
NCKAP1-208ENST00000495619 UPF1Q92900 1129 aaKnown RBP eCLIP13.44□□□□□ -0.26
NCKAP1-208ENST00000495619 ARSIQ5FYB1 569 aa13.43□□□□□ -0.26
NCKAP1-208ENST00000495619 P3H3Q8IVL6 736 aa13.43□□□□□ -0.26
NCKAP1-208ENST00000495619 OXER1Q8TDS5 423 aa13.43□□□□□ -0.26
NCKAP1-208ENST00000495619 GPR153Q6NV75 609 aa13.42□□□□□ -0.26
NCKAP1-208ENST00000495619 EMP3P54852 163 aa13.39□□□□□ -0.27
NCKAP1-208ENST00000495619 EMILIN3Q9NT22 766 aa13.37□□□□□ -0.27
NCKAP1-208ENST00000495619 SLC24A1O60721 1099 aa13.35□□□□□ -0.27
NCKAP1-208ENST00000495619 NUDT7P0C024 238 aa13.35□□□□□ -0.27
NCKAP1-208ENST00000495619 KDM2AQ9Y2K7 1162 aa13.35□□□□□ -0.27
NCKAP1-208ENST00000495619 MARVELD3Q96A59 401 aa13.34□□□□□ -0.27
NCKAP1-208ENST00000495619 ERBB3P21860 1342 aa13.34□□□□□ -0.27
NCKAP1-208ENST00000495619 PSDA5PKW4 1024 aaPredicted RBP13.32□□□□□ -0.28
NCKAP1-208ENST00000495619 DPYSL4O14531 572 aa13.32□□□□□ -0.28
NCKAP1-208ENST00000495619 EVI5O60447 810 aa13.32□□□□□ -0.28
NCKAP1-208ENST00000495619 ARHGEF1Q92888 912 aaKnown RBP13.32□□□□□ -0.28
NCKAP1-208ENST00000495619 KHSRPQ92945 711 aaKnown RBP eCLIP13.32□□□□□ -0.283e-9■■□□□ 12.1
NCKAP1-208ENST00000495619 ARIH1Q9Y4X5 557 aaPredicted RBP13.32□□□□□ -0.28
NCKAP1-208ENST00000495619 SPDYE16A6NNV3 312 aaPredicted RBP13.31□□□□□ -0.28
NCKAP1-208ENST00000495619 LCE2DQ5TA82 110 aaPredicted RBP13.3□□□□□ -0.28
NCKAP1-208ENST00000495619 KCNV2Q8TDN2 545 aa13.28□□□□□ -0.28
NCKAP1-208ENST00000495619 FAM205CA6NFA0 338 aa13.27□□□□□ -0.29
NCKAP1-208ENST00000495619 POTEGQ6S5H5 508 aa13.27□□□□□ -0.29
NCKAP1-208ENST00000495619 POTEMA6NI47 508 aa13.26□□□□□ -0.29
NCKAP1-208ENST00000495619 ANO8Q9HCE9 1232 aaPredicted RBP13.25□□□□□ -0.29
NCKAP1-208ENST00000495619 LHX6Q9UPM6 363 aa13.25□□□□□ -0.29
NCKAP1-208ENST00000495619 KDM4FA0A1W2PPD8 638 aa13.23□□□□□ -0.29
NCKAP1-208ENST00000495619 PDIA6Q15084 440 aa13.23□□□□□ -0.29
NCKAP1-208ENST00000495619 VARS2Q5ST30 1063 aaKnown RBP13.23□□□□□ -0.29
NCKAP1-208ENST00000495619 PPP4R3BQ5MIZ7 849 aa13.21□□□□□ -0.29
NCKAP1-208ENST00000495619 HS3ST6Q96QI5 342 aa13.21□□□□□ -0.29
NCKAP1-208ENST00000495619 ZNF454Q8N9F8 522 aa13.18□□□□□ -0.3
NCKAP1-208ENST00000495619 JPH4Q96JJ6 628 aa13.17□□□□□ -0.3
NCKAP1-208ENST00000495619 PTGER2P43116 358 aa13.16□□□□□ -0.3
NCKAP1-208ENST00000495619 KCNH8Q96L42 1107 aa13.16□□□□□ -0.3
NCKAP1-208ENST00000495619 PCDH10Q9P2E7 1040 aa13.15□□□□□ -0.3
NCKAP1-208ENST00000495619 PHF14O94880 888 aa13.14□□□□□ -0.31
NCKAP1-208ENST00000495619 ZNF687Q8N1G0 1237 aa13.14□□□□□ -0.31
NCKAP1-208ENST00000495619 EPAS1Q99814 870 aa13.14□□□□□ -0.31
NCKAP1-208ENST00000495619 FOSBP53539 338 aa13.13□□□□□ -0.31
NCKAP1-208ENST00000495619 FBXW7Q969H0 707 aa13.13□□□□□ -0.31
NCKAP1-208ENST00000495619 DDX12PQ92771 950 aa13.12□□□□□ -0.31
NCKAP1-208ENST00000495619 ZDHHC16Q969W1 377 aa13.12□□□□□ -0.31
NCKAP1-208ENST00000495619 TYW1BQ6NUM6 668 aa13.11□□□□□ -0.31
NCKAP1-208ENST00000495619 GRXCR2A6NFK2 248 aa13.1□□□□□ -0.31
NCKAP1-208ENST00000495619 PBX2P40425 430 aa13.1□□□□□ -0.31
NCKAP1-208ENST00000495619 SMYD5Q6GMV2 418 aa13.1□□□□□ -0.31
NCKAP1-208ENST00000495619 CDAN1Q8IWY9 1227 aa13.1□□□□□ -0.31
NCKAP1-208ENST00000495619 TULP1O00294 542 aaPredicted RBP13.08□□□□□ -0.32
NCKAP1-208ENST00000495619 NBR1Q14596 966 aa13.08□□□□□ -0.32
NCKAP1-208ENST00000495619 PCDHGA10Q9Y5H3 936 aa13.08□□□□□ -0.32
NCKAP1-208ENST00000495619 POTEB3A0JP26 581 aa13.06□□□□□ -0.32
NCKAP1-208ENST00000495619 POTEBQ6S5H4 581 aa13.06□□□□□ -0.32
NCKAP1-208ENST00000495619 ARHGAP33O14559 1287 aa13.04□□□□□ -0.32
NCKAP1-208ENST00000495619 SEMA3EO15041 775 aa13.04□□□□□ -0.32
NCKAP1-208ENST00000495619 PTPREP23469 700 aa13.04□□□□□ -0.32
NCKAP1-208ENST00000495619 BCL2L12Q9HB09 334 aa13.04□□□□□ -0.32
NCKAP1-208ENST00000495619 MAP3K7O43318 606 aa13□□□□□ -0.33
NCKAP1-208ENST00000495619 RBM33Q96EV2 1170 aaKnown RBP13□□□□□ -0.33
NCKAP1-208ENST00000495619 KCNK17Q96T54 332 aa13□□□□□ -0.33
NCKAP1-208ENST00000495619 ADAM33Q9BZ11 813 aa13□□□□□ -0.33
NCKAP1-208ENST00000495619 TESPA1A2RU30 521 aaPredicted RBP12.98□□□□□ -0.33
NCKAP1-208ENST00000495619 MLLT3P42568 568 aaPredicted RBP12.98□□□□□ -0.33
NCKAP1-208ENST00000495619 EN1Q05925 392 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms