RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 BCL11AQ9H165 835 aa21.19■□□□□ 0.98
CHTOP-206ENST00000495554 ABCC5O15440 1437 aa21.18■□□□□ 0.98
CHTOP-206ENST00000495554 GCC2Q8IWJ2 1684 aa21.18■□□□□ 0.98
CHTOP-206ENST00000495554 DAPK1P53355 1430 aa21.18■□□□□ 0.98
CHTOP-206ENST00000495554 KIF14Q15058 1648 aa21.17■□□□□ 0.98
CHTOP-206ENST00000495554 GPATCH8Q9UKJ3 1502 aaKnown RBP21.17■□□□□ 0.98
CHTOP-206ENST00000495554 KDM6BO15054 1643 aa21.17■□□□□ 0.98
CHTOP-206ENST00000495554 ADCY10Q96PN6 1610 aa21.17■□□□□ 0.98
CHTOP-206ENST00000495554 PTPRGP23470 1445 aa21.17■□□□□ 0.98
CHTOP-206ENST00000495554 DNMT1P26358 1616 aaKnown RBP21.15■□□□□ 0.98
CHTOP-206ENST00000495554 TONSLQ96HA7 1378 aa21.14■□□□□ 0.98
CHTOP-206ENST00000495554 PLEKHD1A6NEE1 506 aa21.14■□□□□ 0.98
CHTOP-206ENST00000495554 CFDP1Q9UEE9 299 aaPredicted RBP21.14■□□□□ 0.97
CHTOP-206ENST00000495554 ROCK1Q13464 1354 aa21.13■□□□□ 0.97
CHTOP-206ENST00000495554 DENND4BO75064 1496 aaPredicted RBP21.12■□□□□ 0.97
CHTOP-206ENST00000495554 SHROOM2Q13796 1616 aa21.12■□□□□ 0.97
CHTOP-206ENST00000495554 CAMSAP2Q08AD1 1489 aa21.09■□□□□ 0.97
CHTOP-206ENST00000495554 ABCC10Q5T3U5 1492 aa21.09■□□□□ 0.97
CHTOP-206ENST00000495554 ITSN2Q9NZM3 1697 aa21.08■□□□□ 0.97
CHTOP-206ENST00000495554 TRIM52Q96A61 297 aa21.07■□□□□ 0.96
CHTOP-206ENST00000495554 ERCC6L2Q5T890 1561 aa21.05■□□□□ 0.96
CHTOP-206ENST00000495554 ZNF777Q9ULD5 760 aaPredicted RBP21.05■□□□□ 0.96
CHTOP-206ENST00000495554 MPHOSPH9Q99550 1183 aa21.04■□□□□ 0.96
CHTOP-206ENST00000495554 CDC42BPAQ5VT25 1732 aa21.03■□□□□ 0.96
CHTOP-206ENST00000495554 NCOA1Q15788 1441 aa21.01■□□□□ 0.95
CHTOP-206ENST00000495554 DDX10Q13206 875 aaKnown RBP20.99■□□□□ 0.95
CHTOP-206ENST00000495554 KDM5BQ9UGL1 1544 aa20.98■□□□□ 0.95
CHTOP-206ENST00000495554 CLASP1Q7Z460 1538 aa20.98■□□□□ 0.95
CHTOP-206ENST00000495554 ADGRL2O95490 1459 aa20.97■□□□□ 0.95
CHTOP-206ENST00000495554 FOXD1Q16676 465 aa20.95■□□□□ 0.94
CHTOP-206ENST00000495554 CROCC2H7BZ55 1655 aa20.94■□□□□ 0.94
CHTOP-206ENST00000495554 HIRIP3Q9BW71 556 aaPredicted RBP20.93■□□□□ 0.94
CHTOP-206ENST00000495554 ADGBQ8N7X0 1667 aa20.93■□□□□ 0.94
CHTOP-206ENST00000495554 ABCC2Q92887 1545 aa20.92■□□□□ 0.94
CHTOP-206ENST00000495554 ANKRD30BQ9BXX2 1392 aa20.91■□□□□ 0.94
CHTOP-206ENST00000495554 ANKRD30AQ9BXX3 1397 aa20.9■□□□□ 0.94
CHTOP-206ENST00000495554 HNRNPMP52272 730 aaKnown RBP eCLIP20.89■□□□□ 0.939e-8■■■■■ 28.7
CHTOP-206ENST00000495554 SLC4A1APQ9BWU0 796 aaKnown RBP20.89■□□□□ 0.93
CHTOP-206ENST00000495554 MBD5Q9P267 1494 aa20.88■□□□□ 0.93
CHTOP-206ENST00000495554 CDC42BPBQ9Y5S2 1711 aa20.88■□□□□ 0.93
CHTOP-206ENST00000495554 PZPP20742 1482 aa20.87■□□□□ 0.93
CHTOP-206ENST00000495554 SHANK2Q9UPX8 1470 aa20.87■□□□□ 0.93
CHTOP-206ENST00000495554 DAXXQ9UER7 740 aaPredicted RBP20.86■□□□□ 0.93
CHTOP-206ENST00000495554 C9orf84Q5VXU9 1444 aa20.86■□□□□ 0.93
CHTOP-206ENST00000495554 ANKRD50Q9ULJ7 1429 aa20.84■□□□□ 0.93
CHTOP-206ENST00000495554 PREX2Q70Z35 1606 aa20.84■□□□□ 0.93
CHTOP-206ENST00000495554 TSPY4P0CV99 314 aa20.84■□□□□ 0.93
CHTOP-206ENST00000495554 TSPY10P0CW01 314 aa20.84■□□□□ 0.93
CHTOP-206ENST00000495554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.84■□□□□ 0.93
CHTOP-206ENST00000495554 SAMD9LQ8IVG5 1584 aa20.84■□□□□ 0.93
CHTOP-206ENST00000495554 L3MBTL2Q969R5 705 aa20.84■□□□□ 0.93
CHTOP-206ENST00000495554 KCNH8Q96L42 1107 aa20.84■□□□□ 0.93
CHTOP-206ENST00000495554 ARHGEF5Q12774 1597 aa20.84■□□□□ 0.93
CHTOP-206ENST00000495554 TTC37Q6PGP7 1564 aa20.82■□□□□ 0.92
CHTOP-206ENST00000495554 UHRF1BP1LA0JNW5 1464 aa20.82■□□□□ 0.92
CHTOP-206ENST00000495554 ANP32CO43423 234 aa20.82■□□□□ 0.92
CHTOP-206ENST00000495554 RPRD2Q5VT52 1461 aaKnown RBP20.82■□□□□ 0.92
CHTOP-206ENST00000495554 CCER2I3L3R5 266 aa20.81■□□□□ 0.92
CHTOP-206ENST00000495554 RSPH4AQ5TD94 716 aa20.78■□□□□ 0.92
CHTOP-206ENST00000495554 ZCCHC11Q5TAX3 1644 aaKnown RBP20.77■□□□□ 0.92
CHTOP-206ENST00000495554 CCDC141Q6ZP82 1450 aa20.77■□□□□ 0.91
CHTOP-206ENST00000495554 KIF15Q9NS87 1388 aa20.75■□□□□ 0.91
CHTOP-206ENST00000495554 EIF4G2P78344 907 aaKnown RBP eCLIP20.75■□□□□ 0.91
CHTOP-206ENST00000495554 KIAA1107Q9UPP5 1409 aa20.75■□□□□ 0.91
CHTOP-206ENST00000495554 HSPA5P11021 654 aaKnown RBP20.75■□□□□ 0.91
CHTOP-206ENST00000495554 PKD2Q13563 968 aa20.75■□□□□ 0.91
CHTOP-206ENST00000495554 ARHGAP5Q13017 1502 aa20.74■□□□□ 0.91
CHTOP-206ENST00000495554 TEX14Q8IWB6 1497 aa20.74■□□□□ 0.91
CHTOP-206ENST00000495554 NUP155O75694 1391 aa20.73■□□□□ 0.91
CHTOP-206ENST00000495554 SYCP2Q9BX26 1530 aa20.72■□□□□ 0.91
CHTOP-206ENST00000495554 NBPF8Q3BBV2 869 aa20.72■□□□□ 0.91
CHTOP-206ENST00000495554 MYO5CQ9NQX4 1742 aa20.71■□□□□ 0.91
CHTOP-206ENST00000495554 PLCH2O75038 1416 aa20.7■□□□□ 0.9
CHTOP-206ENST00000495554 KDM5DQ9BY66 1539 aa20.69■□□□□ 0.9
CHTOP-206ENST00000495554 ARHGEF12Q9NZN5 1544 aa20.69■□□□□ 0.9
CHTOP-206ENST00000495554 WASHC2AQ641Q2 1341 aa20.68■□□□□ 0.9
CHTOP-206ENST00000495554 MAST1Q9Y2H9 1570 aa20.67■□□□□ 0.9
CHTOP-206ENST00000495554 PLEKHH2Q8IVE3 1493 aa20.66■□□□□ 0.9
CHTOP-206ENST00000495554 EFCAB2Q5VUJ9 269 aa20.64■□□□□ 0.89
CHTOP-206ENST00000495554 SUPT16HQ9Y5B9 1047 aaKnown RBP20.63■□□□□ 0.89
CHTOP-206ENST00000495554 OSCARQ8IYS5 282 aa20.59■□□□□ 0.89
CHTOP-206ENST00000495554 SPATA31E1Q6ZUB1 1445 aa20.58■□□□□ 0.88
CHTOP-206ENST00000495554 PLXNC1O60486 1568 aa20.57■□□□□ 0.88
CHTOP-206ENST00000495554 FAM135AQ9P2D6 1515 aa20.57■□□□□ 0.88
CHTOP-206ENST00000495554 TRAPPC8Q9Y2L5 1435 aa20.57■□□□□ 0.88
CHTOP-206ENST00000495554 CCDC7Q96M83 1385 aa20.57■□□□□ 0.88
CHTOP-206ENST00000495554 ABCC1P33527 1531 aa20.57■□□□□ 0.88
CHTOP-206ENST00000495554 WDR7Q9Y4E6 1490 aa20.57■□□□□ 0.88
CHTOP-206ENST00000495554 CNTLNQ9NXG0 1405 aa20.57■□□□□ 0.88
CHTOP-206ENST00000495554 C11orf95C9JLR9 678 aaPredicted RBP20.56■□□□□ 0.88
CHTOP-206ENST00000495554 ARAP3Q8WWN8 1544 aa20.55■□□□□ 0.88
CHTOP-206ENST00000495554 UNC13BO14795 1591 aa20.53■□□□□ 0.88
CHTOP-206ENST00000495554 DUOX2Q9NRD8 1548 aa20.52■□□□□ 0.88
CHTOP-206ENST00000495554 AFAP1Q8N556 730 aa20.51■□□□□ 0.87
CHTOP-206ENST00000495554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.5■□□□□ 0.874e-10■□□□□ 9.2
CHTOP-206ENST00000495554 UHRF1BP1Q6BDS2 1440 aa20.49■□□□□ 0.87
CHTOP-206ENST00000495554 ASXL2Q76L83 1435 aa20.49■□□□□ 0.87
CHTOP-206ENST00000495554 ERBINQ96RT1 1412 aa20.48■□□□□ 0.87
CHTOP-206ENST00000495554 PLA2R1Q13018 1463 aa20.48■□□□□ 0.87
CHTOP-206ENST00000495554 ABCA9Q8IUA7 1624 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms