RNA–Protein interactions for RNA: ENST00000495503.5

ZNF561-220, Transcript of zinc finger protein 561, humanhuman

TSL 3

Gene ZNF561, Length 880 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-220ENST00000495503 ARID3CA6NKF2 412 aa13.39□□□□□ -0.27
ZNF561-220ENST00000495503 NEO1Q92859 1461 aa13.39□□□□□ -0.27
ZNF561-220ENST00000495503 ATP10BO94823 1461 aa13.38□□□□□ -0.27
ZNF561-220ENST00000495503 RAPGEF2Q9Y4G8 1499 aa13.37□□□□□ -0.27
ZNF561-220ENST00000495503 RICTORQ6R327 1708 aa13.36□□□□□ -0.27
ZNF561-220ENST00000495503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.36□□□□□ -0.27
ZNF561-220ENST00000495503 HNRNPUL2Q1KMD3 747 aaKnown RBP13.36□□□□□ -0.27
ZNF561-220ENST00000495503 TTC37Q6PGP7 1564 aa13.35□□□□□ -0.27
ZNF561-220ENST00000495503 YEATS2Q9ULM3 1422 aa13.34□□□□□ -0.27
ZNF561-220ENST00000495503 LTBP4Q8N2S1 1624 aa13.34□□□□□ -0.27
ZNF561-220ENST00000495503 FER1L4A9Z1Z3 1794 aa13.33□□□□□ -0.28
ZNF561-220ENST00000495503 PREX1Q8TCU6 1659 aa13.33□□□□□ -0.28
ZNF561-220ENST00000495503 CTTNBP2Q8WZ74 1663 aa13.32□□□□□ -0.28
ZNF561-220ENST00000495503 MLECQ14165 292 aa13.31□□□□□ -0.28
ZNF561-220ENST00000495503 FHOD3Q2V2M9 1422 aa13.3□□□□□ -0.28
ZNF561-220ENST00000495503 FANCAO15360 1455 aa13.3□□□□□ -0.28
ZNF561-220ENST00000495503 GOLGA3Q08378 1498 aa13.3□□□□□ -0.28
ZNF561-220ENST00000495503 CEBPAP49715 358 aaPredicted RBP13.3□□□□□ -0.28
ZNF561-220ENST00000495503 DENND4BO75064 1496 aaPredicted RBP13.29□□□□□ -0.28
ZNF561-220ENST00000495503 ZNF219Q9P2Y4 722 aaPredicted RBP13.29□□□□□ -0.28
ZNF561-220ENST00000495503 POGZQ7Z3K3 1410 aa13.28□□□□□ -0.28
ZNF561-220ENST00000495503 AKNAQ7Z591 1439 aa13.28□□□□□ -0.28
ZNF561-220ENST00000495503 ZMYM4Q5VZL5 1548 aa13.28□□□□□ -0.28
ZNF561-220ENST00000495503 ARHGEF12Q9NZN5 1544 aa13.28□□□□□ -0.28
ZNF561-220ENST00000495503 PTPRTO14522 1441 aa13.26□□□□□ -0.29
ZNF561-220ENST00000495503 ZFYVE16Q7Z3T8 1539 aa13.26□□□□□ -0.29
ZNF561-220ENST00000495503 HECW1Q76N89 1606 aa13.24□□□□□ -0.29
ZNF561-220ENST00000495503 IQSEC2Q5JU85 1478 aa13.23□□□□□ -0.29
ZNF561-220ENST00000495503 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
ZNF561-220ENST00000495503 P3H3Q8IVL6 736 aa13.23□□□□□ -0.29
ZNF561-220ENST00000495503 EFCAB5A4FU69 1503 aa13.23□□□□□ -0.29
ZNF561-220ENST00000495503 UHRF1BP1Q6BDS2 1440 aa13.2□□□□□ -0.3
ZNF561-220ENST00000495503 MAGI2Q86UL8 1455 aa13.19□□□□□ -0.3
ZNF561-220ENST00000495503 POTEHQ6S545 545 aa13.19□□□□□ -0.3
ZNF561-220ENST00000495503 RAPGEF6Q8TEU7 1601 aa13.19□□□□□ -0.3
ZNF561-220ENST00000495503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.18□□□□□ -0.3
ZNF561-220ENST00000495503 NUP153P49790 1475 aaKnown RBP13.17□□□□□ -0.3
ZNF561-220ENST00000495503 MED1Q15648 1581 aaPredicted RBP13.17□□□□□ -0.3
ZNF561-220ENST00000495503 CFAP74Q9C0B2 1584 aa13.16□□□□□ -0.3
ZNF561-220ENST00000495503 SETD1BQ9UPS6 1966 aaKnown RBP13.16□□□□□ -0.3
ZNF561-220ENST00000495503 ATP10AO60312 1499 aa13.16□□□□□ -0.3
ZNF561-220ENST00000495503 NCOA1Q15788 1441 aa13.14□□□□□ -0.31
ZNF561-220ENST00000495503 UBAP1LF5GYI3 381 aa13.14□□□□□ -0.31
ZNF561-220ENST00000495503 SAMD9Q5K651 1589 aa13.14□□□□□ -0.31
ZNF561-220ENST00000495503 C3P01024 1663 aa13.14□□□□□ -0.31
ZNF561-220ENST00000495503 C9orf84Q5VXU9 1444 aa13.13□□□□□ -0.31
ZNF561-220ENST00000495503 PRXQ9BXM0 1461 aa13.12□□□□□ -0.31
ZNF561-220ENST00000495503 SCAPERQ9BY12 1400 aa13.12□□□□□ -0.31
ZNF561-220ENST00000495503 ZNF335Q9H4Z2 1342 aaPredicted RBP13.12□□□□□ -0.31
ZNF561-220ENST00000495503 ABCB7O75027 752 aa13.1□□□□□ -0.31
ZNF561-220ENST00000495503 HSPA1LP34931 641 aa13.09□□□□□ -0.31
ZNF561-220ENST00000495503 CAMSAP1Q5T5Y3 1602 aa13.07□□□□□ -0.32
ZNF561-220ENST00000495503 PLEKHD1A6NEE1 506 aa13.06□□□□□ -0.32
ZNF561-220ENST00000495503 NCKAP5LQ9HCH0 1330 aa13.06□□□□□ -0.32
ZNF561-220ENST00000495503 TRAPPC8Q9Y2L5 1435 aa13.05□□□□□ -0.32
ZNF561-220ENST00000495503 DIP2CQ9Y2E4 1556 aa13.05□□□□□ -0.32
ZNF561-220ENST00000495503 PLCH2O75038 1416 aa13.05□□□□□ -0.32
ZNF561-220ENST00000495503 FAM9AQ8IZU1 332 aaPredicted RBP13.02□□□□□ -0.33
ZNF561-220ENST00000495503 KDM5CP41229 1560 aa13.02□□□□□ -0.33
ZNF561-220ENST00000495503 ABCA6Q8N139 1617 aa13.02□□□□□ -0.33
ZNF561-220ENST00000495503 AFAP1Q8N556 730 aa13.01□□□□□ -0.33
ZNF561-220ENST00000495503 REREQ9P2R6 1566 aa13.01□□□□□ -0.33
ZNF561-220ENST00000495503 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
ZNF561-220ENST00000495503 CDK13Q14004 1512 aaKnown RBP12.99□□□□□ -0.33
ZNF561-220ENST00000495503 PIP4K2BP78356 416 aa12.99□□□□□ -0.33
ZNF561-220ENST00000495503 ALKQ9UM73 1620 aa12.99□□□□□ -0.33
ZNF561-220ENST00000495503 AGLP35573 1532 aa12.98□□□□□ -0.33
ZNF561-220ENST00000495503 RBM42Q9BTD8 480 aaKnown RBP12.97□□□□□ -0.33
ZNF561-220ENST00000495503 TCOF1Q13428 1488 aaKnown RBP12.97□□□□□ -0.33
ZNF561-220ENST00000495503 ZNF518AQ6AHZ1 1483 aa12.97□□□□□ -0.33
ZNF561-220ENST00000495503 RGS17Q9UGC6 210 aaPredicted RBP12.96□□□□□ -0.33
ZNF561-220ENST00000495503 MYO5CQ9NQX4 1742 aa12.96□□□□□ -0.34
ZNF561-220ENST00000495503 PLA2R1Q13018 1463 aa12.94□□□□□ -0.34
ZNF561-220ENST00000495503 EFCAB2Q5VUJ9 269 aa12.94□□□□□ -0.34
ZNF561-220ENST00000495503 NPATQ14207 1427 aa12.94□□□□□ -0.34
ZNF561-220ENST00000495503 ZNF142P52746 1687 aaPredicted RBP12.93□□□□□ -0.34
ZNF561-220ENST00000495503 KIF14Q15058 1648 aa12.93□□□□□ -0.34
ZNF561-220ENST00000495503 MYO3AQ8NEV4 1616 aa12.93□□□□□ -0.34
ZNF561-220ENST00000495503 RANGAP1P46060 587 aaPredicted RBP12.93□□□□□ -0.34
ZNF561-220ENST00000495503 MLH3Q9UHC1 1453 aa12.92□□□□□ -0.34
ZNF561-220ENST00000495503 MROH2AA6NES4 1674 aa12.92□□□□□ -0.34
ZNF561-220ENST00000495503 CNTLNQ9NXG0 1405 aa12.91□□□□□ -0.34
ZNF561-220ENST00000495503 CEP170BQ9Y4F5 1589 aaPredicted RBP12.9□□□□□ -0.34
ZNF561-220ENST00000495503 PKD2Q13563 968 aa12.9□□□□□ -0.34
ZNF561-220ENST00000495503 ZMYM3Q14202 1370 aa12.9□□□□□ -0.34
ZNF561-220ENST00000495503 SUPT6HQ7KZ85 1726 aaKnown RBP12.9□□□□□ -0.34
ZNF561-220ENST00000495503 KIDINS220Q9ULH0 1771 aa12.89□□□□□ -0.35
ZNF561-220ENST00000495503 TOM1O60784 492 aa12.89□□□□□ -0.35
ZNF561-220ENST00000495503 ESF1Q9H501 851 aaKnown RBP12.89□□□□□ -0.35
ZNF561-220ENST00000495503 MYT1LQ9UL68 1186 aa12.88□□□□□ -0.35
ZNF561-220ENST00000495503 ARHGAP5Q13017 1502 aa12.88□□□□□ -0.35
ZNF561-220ENST00000495503 NEURL4Q96JN8 1562 aa12.87□□□□□ -0.35
ZNF561-220ENST00000495503 POLA2Q14181 598 aa12.87□□□□□ -0.35
ZNF561-220ENST00000495503 CDC42BPBQ9Y5S2 1711 aa12.87□□□□□ -0.35
ZNF561-220ENST00000495503 CPS1P31327 1500 aa12.87□□□□□ -0.35
ZNF561-220ENST00000495503 PTPRKQ15262 1439 aa12.87□□□□□ -0.35
ZNF561-220ENST00000495503 SHANK2Q9UPX8 1470 aa12.86□□□□□ -0.35
ZNF561-220ENST00000495503 CLTCQ00610 1675 aaKnown RBP12.86□□□□□ -0.35
ZNF561-220ENST00000495503 ITSN2Q9NZM3 1697 aa12.84□□□□□ -0.35
ZNF561-220ENST00000495503 VWDEQ8N2E2 1590 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms