RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 EMP3P54852 163 aa11.29□□□□□ -0.6
RBM39-240ENST00000495293 HS3ST6Q96QI5 342 aa11.27□□□□□ -0.61
RBM39-240ENST00000495293 TAOK2Q9UL54 1235 aa11.27□□□□□ -0.61
RBM39-240ENST00000495293 FAM205CA6NFA0 338 aa11.26□□□□□ -0.61
RBM39-240ENST00000495293 PPP1R37O75864 691 aa11.24□□□□□ -0.61
RBM39-240ENST00000495293 HOXB1P14653 301 aaPredicted RBP11.24□□□□□ -0.61
RBM39-240ENST00000495293 DOK7Q18PE1 504 aa11.21□□□□□ -0.61
RBM39-240ENST00000495293 KIF3CO14782 793 aa11.2□□□□□ -0.62
RBM39-240ENST00000495293 ZNF710Q8N1W2 664 aa11.19□□□□□ -0.62
RBM39-240ENST00000495293 GPR153Q6NV75 609 aa11.18□□□□□ -0.62
RBM39-240ENST00000495293 C2orf72A6NCS6 295 aa11.17□□□□□ -0.62
RBM39-240ENST00000495293 HS6ST3Q8IZP7 471 aa11.16□□□□□ -0.62
RBM39-240ENST00000495293 KHSRPQ92945 711 aaKnown RBP eCLIP11.15□□□□□ -0.623e-14■■■□□ 14.6
RBM39-240ENST00000495293 NKX1-1Q15270 411 aaPredicted RBP11.13□□□□□ -0.63
RBM39-240ENST00000495293 ARSIQ5FYB1 569 aa11.11□□□□□ -0.63
RBM39-240ENST00000495293 ERBB3P21860 1342 aa11.1□□□□□ -0.63
RBM39-240ENST00000495293 CHGAP10645 457 aaKnown RBP11.1□□□□□ -0.63
RBM39-240ENST00000495293 VARS2Q5ST30 1063 aaKnown RBP11.1□□□□□ -0.63
RBM39-240ENST00000495293 ZSWIM6Q9HCJ5 1215 aa11.1□□□□□ -0.63
RBM39-240ENST00000495293 RIMBP2O15034 1052 aa11.09□□□□□ -0.63
RBM39-240ENST00000495293 DNAJC5Q9H3Z4 198 aa11.03□□□□□ -0.64
RBM39-240ENST00000495293 NUDT7P0C024 238 aa11□□□□□ -0.65
RBM39-240ENST00000495293 TMC2Q8TDI7 906 aa11□□□□□ -0.65
RBM39-240ENST00000495293 ZNF687Q8N1G0 1237 aa10.99□□□□□ -0.65
RBM39-240ENST00000495293 RNF166Q96A37 237 aaPredicted RBP10.99□□□□□ -0.65
RBM39-240ENST00000495293 PCDHGA4Q9Y5G9 962 aa10.99□□□□□ -0.65
RBM39-240ENST00000495293 ZNF316A6NFI3 1004 aaPredicted RBP10.98□□□□□ -0.65
RBM39-240ENST00000495293 SLC34A2O95436 690 aa10.97□□□□□ -0.65
RBM39-240ENST00000495293 POTEEQ6S8J3 1075 aa10.95□□□□□ -0.66
RBM39-240ENST00000495293 KDM4FA0A1W2PPD8 638 aa10.94□□□□□ -0.66
RBM39-240ENST00000495293 DSG2Q14126 1118 aa10.94□□□□□ -0.66
RBM39-240ENST00000495293 GPHNQ9NQX3 736 aaPredicted RBP10.94□□□□□ -0.66
RBM39-240ENST00000495293 LHX6Q9UPM6 363 aa10.94□□□□□ -0.66
RBM39-240ENST00000495293 FOXK1P85037 733 aa10.93□□□□□ -0.66
RBM39-240ENST00000495293 PLPP6Q8IY26 295 aa10.91□□□□□ -0.66
RBM39-240ENST00000495293 MYT1LQ9UL68 1186 aa10.91□□□□□ -0.66
RBM39-240ENST00000495293 GTPBP6O43824 516 aaPredicted RBP10.9□□□□□ -0.66
RBM39-240ENST00000495293 PTCD2Q8WV60 388 aaKnown RBP10.89□□□□□ -0.67
RBM39-240ENST00000495293 NCKAP5LQ9HCH0 1330 aa10.87□□□□□ -0.67
RBM39-240ENST00000495293 CRISPLD2Q9H0B8 497 aa10.87□□□□□ -0.67
RBM39-240ENST00000495293 AXIN2Q9Y2T1 843 aa10.86□□□□□ -0.67
RBM39-240ENST00000495293 LSM11P83369 360 aaKnown RBP eCLIP10.82□□□□□ -0.685e-15■■□□□ 11.6
RBM39-240ENST00000495293 ANKRD13DQ6ZTN6 518 aa10.82□□□□□ -0.68
RBM39-240ENST00000495293 DCAF8L2P0C7V8 631 aa10.8□□□□□ -0.68
RBM39-240ENST00000495293 PTGER2P43116 358 aa10.78□□□□□ -0.68
RBM39-240ENST00000495293 PPP1R15BQ5SWA1 713 aa10.78□□□□□ -0.68
RBM39-240ENST00000495293 CADPS2Q86UW7 1296 aa10.78□□□□□ -0.68
RBM39-240ENST00000495293 OXER1Q8TDS5 423 aa10.78□□□□□ -0.68
RBM39-240ENST00000495293 UPF1Q92900 1129 aaKnown RBP eCLIP10.77□□□□□ -0.69
RBM39-240ENST00000495293 RYDENQ9NUL5 291 aaKnown RBP10.77□□□□□ -0.69
RBM39-240ENST00000495293 PBX2P40425 430 aa10.75□□□□□ -0.69
RBM39-240ENST00000495293 DMRTA1Q5VZB9 504 aa10.74□□□□□ -0.69
RBM39-240ENST00000495293 PSEN2P49810 448 aa10.73□□□□□ -0.69
RBM39-240ENST00000495293 LARP6Q9BRS8 491 aaKnown RBP10.71□□□□□ -0.69
RBM39-240ENST00000495293 ARHGAP33O14559 1287 aa10.7□□□□□ -0.7
RBM39-240ENST00000495293 PDE4AP27815 886 aa10.7□□□□□ -0.7
RBM39-240ENST00000495293 MFSD10Q14728 455 aa10.7□□□□□ -0.7
RBM39-240ENST00000495293 ADGRD1Q6QNK2 874 aa10.68□□□□□ -0.7
RBM39-240ENST00000495293 EMILIN3Q9NT22 766 aa10.68□□□□□ -0.7
RBM39-240ENST00000495293 PSDA5PKW4 1024 aaPredicted RBP10.67□□□□□ -0.7
RBM39-240ENST00000495293 TBC1D12O60347 775 aa10.67□□□□□ -0.7
RBM39-240ENST00000495293 DDX27Q96GQ7 796 aaKnown RBP10.66□□□□□ -0.7
RBM39-240ENST00000495293 PPP4R3BQ5MIZ7 849 aa10.65□□□□□ -0.7
RBM39-240ENST00000495293 HRO43593 1189 aa10.64□□□□□ -0.71
RBM39-240ENST00000495293 RTN4Q9NQC3 1192 aaKnown RBP10.64□□□□□ -0.71
RBM39-240ENST00000495293 ZNF454Q8N9F8 522 aa10.63□□□□□ -0.71
RBM39-240ENST00000495293 KCNK17Q96T54 332 aa10.63□□□□□ -0.71
RBM39-240ENST00000495293 ANO8Q9HCE9 1232 aaPredicted RBP10.62□□□□□ -0.71
RBM39-240ENST00000495293 EVI5O60447 810 aa10.61□□□□□ -0.71
RBM39-240ENST00000495293 FOSBP53539 338 aa10.61□□□□□ -0.71
RBM39-240ENST00000495293 TK2O00142 265 aa10.58□□□□□ -0.72
RBM39-240ENST00000495293 BCL2L12Q9HB09 334 aa10.58□□□□□ -0.72
RBM39-240ENST00000495293 BBXQ8WY36 941 aaPredicted RBP10.57□□□□□ -0.72
RBM39-240ENST00000495293 PLA2G2EQ9NZK7 142 aa10.57□□□□□ -0.72
RBM39-240ENST00000495293 ADAM33Q9BZ11 813 aa10.56□□□□□ -0.72
RBM39-240ENST00000495293 JPH4Q96JJ6 628 aa10.55□□□□□ -0.72
RBM39-240ENST00000495293 VPS9D1Q9Y2B5 631 aa10.55□□□□□ -0.72
RBM39-240ENST00000495293 CAMK2BQ13554 666 aa10.54□□□□□ -0.72
RBM39-240ENST00000495293 MAP3K9P80192 1104 aa10.53□□□□□ -0.72
RBM39-240ENST00000495293 AMER1Q5JTC6 1135 aaPredicted RBP10.52□□□□□ -0.73
RBM39-240ENST00000495293 PCDHGA10Q9Y5H3 936 aa10.52□□□□□ -0.73
RBM39-240ENST00000495293 ZDHHC16Q969W1 377 aa10.5□□□□□ -0.73
RBM39-240ENST00000495293 ZBED2Q9BTP6 218 aa10.5□□□□□ -0.73
RBM39-240ENST00000495293 HCSTQ9UBK5 93 aa10.5□□□□□ -0.73
RBM39-240ENST00000495293 DPYSL4O14531 572 aa10.49□□□□□ -0.73
RBM39-240ENST00000495293 NISCHQ9Y2I1 1504 aa10.48□□□□□ -0.73
RBM39-240ENST00000495293 BHMG1C9JSJ3 638 aaPredicted RBP10.48□□□□□ -0.73
RBM39-240ENST00000495293 PTPREP23469 700 aa10.48□□□□□ -0.73
RBM39-240ENST00000495293 KCTD12Q96CX2 325 aaKnown RBP10.47□□□□□ -0.73
RBM39-240ENST00000495293 SLC4A5Q9BY07 1137 aa10.47□□□□□ -0.73
RBM39-240ENST00000495293 COL9A1P20849 921 aa10.46□□□□□ -0.73
RBM39-240ENST00000495293 SPRYD3Q8NCJ5 442 aa10.44□□□□□ -0.74
RBM39-240ENST00000495293 KCNH8Q96L42 1107 aa10.44□□□□□ -0.74
RBM39-240ENST00000495293 PROX2Q3B8N5 592 aa10.43□□□□□ -0.74
RBM39-240ENST00000495293 PHF14O94880 888 aa10.41□□□□□ -0.74
RBM39-240ENST00000495293 PPP1R3GB7ZBB8 358 aa10.4□□□□□ -0.74
RBM39-240ENST00000495293 TYW1BQ6NUM6 668 aa10.4□□□□□ -0.74
RBM39-240ENST00000495293 PAXIP1Q6ZW49 1069 aaPredicted RBP10.4□□□□□ -0.74
RBM39-240ENST00000495293 CFAP44Q96MT7 982 aa10.39□□□□□ -0.75
RBM39-240ENST00000495293 DDX12PQ92771 950 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms