RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 KCNH8Q96L42 1107 aa18.54■□□□□ 0.56
BRD3-206ENST00000494743 ABCA9Q8IUA7 1624 aa18.52■□□□□ 0.56
BRD3-206ENST00000494743 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.52■□□□□ 0.55
BRD3-206ENST00000494743 TCOF1Q13428 1488 aaKnown RBP18.52■□□□□ 0.55
BRD3-206ENST00000494743 ITSN2Q9NZM3 1697 aa18.51■□□□□ 0.55
BRD3-206ENST00000494743 PREX2Q70Z35 1606 aa18.5■□□□□ 0.55
BRD3-206ENST00000494743 CDC42BPAQ5VT25 1732 aa18.5■□□□□ 0.55
BRD3-206ENST00000494743 PTPN23Q9H3S7 1636 aa18.49■□□□□ 0.55
BRD3-206ENST00000494743 PLCH2O75038 1416 aa18.49■□□□□ 0.55
BRD3-206ENST00000494743 ARAP3Q8WWN8 1544 aa18.48■□□□□ 0.55
BRD3-206ENST00000494743 GLI2P10070 1586 aa18.47■□□□□ 0.55
BRD3-206ENST00000494743 CFDP1Q9UEE9 299 aaPredicted RBP18.46■□□□□ 0.55
BRD3-206ENST00000494743 PCGF6Q9BYE7 350 aa18.45■□□□□ 0.54
BRD3-206ENST00000494743 MYO5CQ9NQX4 1742 aa18.45■□□□□ 0.54
BRD3-206ENST00000494743 LMTK3Q96Q04 1460 aa18.45■□□□□ 0.54
BRD3-206ENST00000494743 CDC42BPBQ9Y5S2 1711 aa18.44■□□□□ 0.54
BRD3-206ENST00000494743 CAMSAP2Q08AD1 1489 aa18.43■□□□□ 0.54
BRD3-206ENST00000494743 COL17A1Q9UMD9 1497 aaPredicted RBP18.43■□□□□ 0.54
BRD3-206ENST00000494743 ARHGAP5Q13017 1502 aa18.42■□□□□ 0.54
BRD3-206ENST00000494743 ZNF644Q9H582 1327 aaPredicted RBP18.42■□□□□ 0.54
BRD3-206ENST00000494743 FAM50AQ14320 339 aaKnown RBP18.41■□□□□ 0.54
BRD3-206ENST00000494743 CD109Q6YHK3 1445 aa18.4■□□□□ 0.54
BRD3-206ENST00000494743 SAMD9LQ8IVG5 1584 aa18.4■□□□□ 0.54
BRD3-206ENST00000494743 MAP3K4Q9Y6R4 1608 aa18.4■□□□□ 0.54
BRD3-206ENST00000494743 EFCAB2Q5VUJ9 269 aa18.37■□□□□ 0.53
BRD3-206ENST00000494743 FANCAO15360 1455 aa18.37■□□□□ 0.53
BRD3-206ENST00000494743 MBD5Q9P267 1494 aa18.36■□□□□ 0.53
BRD3-206ENST00000494743 KIAA1107Q9UPP5 1409 aa18.36■□□□□ 0.53
BRD3-206ENST00000494743 ABCC1P33527 1531 aa18.35■□□□□ 0.53
BRD3-206ENST00000494743 PLEKHH2Q8IVE3 1493 aa18.35■□□□□ 0.53
BRD3-206ENST00000494743 PTPRKQ15262 1439 aa18.35■□□□□ 0.53
BRD3-206ENST00000494743 ZNF777Q9ULD5 760 aaPredicted RBP18.35■□□□□ 0.53
BRD3-206ENST00000494743 DNMT1P26358 1616 aaKnown RBP18.34■□□□□ 0.53
BRD3-206ENST00000494743 ABCC5O15440 1437 aa18.33■□□□□ 0.53
BRD3-206ENST00000494743 DAPK1P53355 1430 aa18.33■□□□□ 0.53
BRD3-206ENST00000494743 ARHGEF5Q12774 1597 aa18.33■□□□□ 0.52
BRD3-206ENST00000494743 SYCP2Q9BX26 1530 aa18.33■□□□□ 0.52
BRD3-206ENST00000494743 ARHGEF12Q9NZN5 1544 aa18.33■□□□□ 0.52
BRD3-206ENST00000494743 CFAP74Q9C0B2 1584 aa18.31■□□□□ 0.52
BRD3-206ENST00000494743 TEX14Q8IWB6 1497 aa18.31■□□□□ 0.52
BRD3-206ENST00000494743 NEO1Q92859 1461 aa18.31■□□□□ 0.52
BRD3-206ENST00000494743 AKNAQ7Z591 1439 aa18.3■□□□□ 0.52
BRD3-206ENST00000494743 CCDC141Q6ZP82 1450 aa18.29■□□□□ 0.52
BRD3-206ENST00000494743 SHANK2Q9UPX8 1470 aa18.29■□□□□ 0.52
BRD3-206ENST00000494743 ITGAEP38570 1179 aa18.29■□□□□ 0.52
BRD3-206ENST00000494743 HNRNPMP52272 730 aaKnown RBP eCLIP18.27■□□□□ 0.52
BRD3-206ENST00000494743 CROCC2H7BZ55 1655 aa18.27■□□□□ 0.52
BRD3-206ENST00000494743 RSPH4AQ5TD94 716 aa18.26■□□□□ 0.51
BRD3-206ENST00000494743 SOCS7O14512 581 aa18.25■□□□□ 0.51
BRD3-206ENST00000494743 SCAPERQ9BY12 1400 aa18.24■□□□□ 0.51
BRD3-206ENST00000494743 TRAPPC8Q9Y2L5 1435 aa18.24■□□□□ 0.51
BRD3-206ENST00000494743 ROCK1Q13464 1354 aa18.24■□□□□ 0.51
BRD3-206ENST00000494743 ADGRL2O95490 1459 aa18.24■□□□□ 0.51
BRD3-206ENST00000494743 C9orf84Q5VXU9 1444 aa18.23■□□□□ 0.51
BRD3-206ENST00000494743 MAST1Q9Y2H9 1570 aa18.22■□□□□ 0.51
BRD3-206ENST00000494743 ILDR2Q71H61 639 aa18.22■□□□□ 0.51
BRD3-206ENST00000494743 HFM1A2PYH4 1435 aa18.22■□□□□ 0.51
BRD3-206ENST00000494743 POGZQ7Z3K3 1410 aa18.22■□□□□ 0.51
BRD3-206ENST00000494743 NAIPQ13075 1403 aa18.19■□□□□ 0.5
BRD3-206ENST00000494743 NCOA1Q15788 1441 aa18.19■□□□□ 0.5
BRD3-206ENST00000494743 CHIC2Q9UKJ5 165 aa18.19■□□□□ 0.5
BRD3-206ENST00000494743 ZNF518AQ6AHZ1 1483 aa18.19■□□□□ 0.5
BRD3-206ENST00000494743 KDM5CP41229 1560 aa18.18■□□□□ 0.5
BRD3-206ENST00000494743 TSPY4P0CV99 314 aa18.18■□□□□ 0.5
BRD3-206ENST00000494743 TSPY10P0CW01 314 aa18.18■□□□□ 0.5
BRD3-206ENST00000494743 DENND4BO75064 1496 aaPredicted RBP18.18■□□□□ 0.5
BRD3-206ENST00000494743 AFAP1Q8N556 730 aa18.17■□□□□ 0.5
BRD3-206ENST00000494743 ADGBQ8N7X0 1667 aa18.17■□□□□ 0.5
BRD3-206ENST00000494743 ZFYVE16Q7Z3T8 1539 aa18.17■□□□□ 0.5
BRD3-206ENST00000494743 RTEL1-TNFRSF6BF6WH68 1400 aa18.16■□□□□ 0.5
BRD3-206ENST00000494743 SETD5Q9C0A6 1442 aa18.16■□□□□ 0.5
BRD3-206ENST00000494743 INO80Q9ULG1 1556 aaPredicted RBP18.16■□□□□ 0.5
BRD3-206ENST00000494743 ANKRD30AQ9BXX3 1397 aa18.16■□□□□ 0.5
BRD3-206ENST00000494743 DISP3Q9P2K9 1392 aa18.16■□□□□ 0.5
BRD3-206ENST00000494743 PLXNC1O60486 1568 aa18.15■□□□□ 0.5
BRD3-206ENST00000494743 FRMPD1Q5SYB0 1578 aa18.14■□□□□ 0.49
BRD3-206ENST00000494743 GCC2Q8IWJ2 1684 aa18.14■□□□□ 0.49
BRD3-206ENST00000494743 RRP7BPQ9NSQ0 103 aa18.13■□□□□ 0.49
BRD3-206ENST00000494743 SPAG9O60271 1321 aaKnown RBP18.13■□□□□ 0.49
BRD3-206ENST00000494743 RAB3GAP2Q9H2M9 1393 aa18.13■□□□□ 0.49
BRD3-206ENST00000494743 PTPRMP28827 1452 aa18.13■□□□□ 0.49
BRD3-206ENST00000494743 MLH3Q9UHC1 1453 aa18.12■□□□□ 0.49
BRD3-206ENST00000494743 ATP7AQ04656 1500 aa18.12■□□□□ 0.49
BRD3-206ENST00000494743 RICTORQ6R327 1708 aa18.12■□□□□ 0.49
BRD3-206ENST00000494743 KIF15Q9NS87 1388 aa18.11■□□□□ 0.49
BRD3-206ENST00000494743 ZMYM4Q5VZL5 1548 aa18.1■□□□□ 0.49
BRD3-206ENST00000494743 RAPGEF3O95398 923 aa18.1■□□□□ 0.49
BRD3-206ENST00000494743 ADAMTSL3P82987 1691 aa18.09■□□□□ 0.49
BRD3-206ENST00000494743 HRCP23327 699 aa18.09■□□□□ 0.49
BRD3-206ENST00000494743 KIDINS220Q9ULH0 1771 aa18.07■□□□□ 0.48
BRD3-206ENST00000494743 ANKRD50Q9ULJ7 1429 aa18.06■□□□□ 0.48
BRD3-206ENST00000494743 DUOX2Q9NRD8 1548 aa18.06■□□□□ 0.48
BRD3-206ENST00000494743 MAGI2Q86UL8 1455 aa18.03■□□□□ 0.48
BRD3-206ENST00000494743 ERBINQ96RT1 1412 aa18.03■□□□□ 0.48
BRD3-206ENST00000494743 ABCA6Q8N139 1617 aa18.02■□□□□ 0.48
BRD3-206ENST00000494743 CERKQ8TCT0 537 aa18.02■□□□□ 0.48
BRD3-206ENST00000494743 DIP2CQ9Y2E4 1556 aa18.01■□□□□ 0.47
BRD3-206ENST00000494743 YEATS2Q9ULM3 1422 aa18■□□□□ 0.47
BRD3-206ENST00000494743 DHX29Q7Z478 1369 aaKnown RBP18■□□□□ 0.47
BRD3-206ENST00000494743 SPATA31D1Q6ZQQ2 1576 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms