RNA–Protein interactions for RNA: ENST00000494570.1

KDM4C-211, Transcript of lysine demethylase 4C, humanhuman

TSL 2

Gene KDM4C, Length 647 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-211ENST00000494570 CLIP1P30622 1438 aa13.35□□□□□ -0.27
KDM4C-211ENST00000494570 CD109Q6YHK3 1445 aa13.35□□□□□ -0.27
KDM4C-211ENST00000494570 MAP3K4Q9Y6R4 1608 aa13.35□□□□□ -0.27
KDM4C-211ENST00000494570 CDK13Q14004 1512 aaKnown RBP13.33□□□□□ -0.28
KDM4C-211ENST00000494570 MAGI3Q5TCQ9 1506 aa13.33□□□□□ -0.28
KDM4C-211ENST00000494570 PLEKHD1A6NEE1 506 aa13.32□□□□□ -0.28
KDM4C-211ENST00000494570 CASKIN1Q8WXD9 1431 aa13.3□□□□□ -0.28
KDM4C-211ENST00000494570 ATP1B4Q9UN42 357 aaPredicted RBP13.3□□□□□ -0.28
KDM4C-211ENST00000494570 ZBTB12Q9Y330 459 aaPredicted RBP13.3□□□□□ -0.28
KDM4C-211ENST00000494570 TSPOAP1O95153 1857 aa13.29□□□□□ -0.28
KDM4C-211ENST00000494570 CEP162Q5TB80 1403 aa13.29□□□□□ -0.28
KDM4C-211ENST00000494570 TEX14Q8IWB6 1497 aa13.28□□□□□ -0.28
KDM4C-211ENST00000494570 ABCA9Q8IUA7 1624 aa13.27□□□□□ -0.29
KDM4C-211ENST00000494570 KDM6BO15054 1643 aa13.26□□□□□ -0.29
KDM4C-211ENST00000494570 CFAP43Q8NDM7 1665 aa13.25□□□□□ -0.29
KDM4C-211ENST00000494570 HECW1Q76N89 1606 aa13.25□□□□□ -0.29
KDM4C-211ENST00000494570 PCF11O94913 1555 aaKnown RBP13.24□□□□□ -0.29
KDM4C-211ENST00000494570 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.24□□□□□ -0.29
KDM4C-211ENST00000494570 POTEHQ6S545 545 aa13.24□□□□□ -0.29
KDM4C-211ENST00000494570 TROQ12816 1431 aaPredicted RBP13.23□□□□□ -0.29
KDM4C-211ENST00000494570 FYCO1Q9BQS8 1478 aa13.23□□□□□ -0.29
KDM4C-211ENST00000494570 CDK11AQ9UQ88 783 aaPredicted RBP13.22□□□□□ -0.29
KDM4C-211ENST00000494570 ARAP3Q8WWN8 1544 aa13.21□□□□□ -0.29
KDM4C-211ENST00000494570 PHLDB1Q86UU1 1377 aa13.2□□□□□ -0.3
KDM4C-211ENST00000494570 LRRIQ1Q96JM4 1722 aa13.2□□□□□ -0.3
KDM4C-211ENST00000494570 PLCH2O75038 1416 aa13.2□□□□□ -0.3
KDM4C-211ENST00000494570 TTC37Q6PGP7 1564 aa13.2□□□□□ -0.3
KDM4C-211ENST00000494570 CCDC18Q5T9S5 1454 aa13.19□□□□□ -0.3
KDM4C-211ENST00000494570 NEO1Q92859 1461 aa13.19□□□□□ -0.3
KDM4C-211ENST00000494570 RAPGEF3O95398 923 aa13.19□□□□□ -0.3
KDM4C-211ENST00000494570 KIF14Q15058 1648 aa13.17□□□□□ -0.3
KDM4C-211ENST00000494570 AKNAQ7Z591 1439 aa13.16□□□□□ -0.3
KDM4C-211ENST00000494570 KDM4FA0A1W2PPD8 638 aa13.16□□□□□ -0.3
KDM4C-211ENST00000494570 FANCAO15360 1455 aa13.16□□□□□ -0.3
KDM4C-211ENST00000494570 EFCAB2Q5VUJ9 269 aa13.12□□□□□ -0.31
KDM4C-211ENST00000494570 VPS8Q8N3P4 1428 aa13.12□□□□□ -0.31
KDM4C-211ENST00000494570 FRMPD1Q5SYB0 1578 aa13.11□□□□□ -0.31
KDM4C-211ENST00000494570 DENND4BO75064 1496 aaPredicted RBP13.1□□□□□ -0.31
KDM4C-211ENST00000494570 SCAPERQ9BY12 1400 aa13.1□□□□□ -0.31
KDM4C-211ENST00000494570 GPATCH8Q9UKJ3 1502 aaKnown RBP13.08□□□□□ -0.31
KDM4C-211ENST00000494570 AKT1S1Q96B36 256 aa13.08□□□□□ -0.32
KDM4C-211ENST00000494570 MTUS2Q5JR59 1369 aa13.07□□□□□ -0.32
KDM4C-211ENST00000494570 ADGRL1O94910 1474 aa13.07□□□□□ -0.32
KDM4C-211ENST00000494570 POGZQ7Z3K3 1410 aa13.06□□□□□ -0.32
KDM4C-211ENST00000494570 KANK4Q5T7N3 995 aaPredicted RBP13.06□□□□□ -0.32
KDM4C-211ENST00000494570 AFAP1Q8N556 730 aa13.06□□□□□ -0.32
KDM4C-211ENST00000494570 ARHGEF12Q9NZN5 1544 aa13.06□□□□□ -0.32
KDM4C-211ENST00000494570 ARHGAP5Q13017 1502 aa13.04□□□□□ -0.32
KDM4C-211ENST00000494570 YEATS2Q9ULM3 1422 aa13.04□□□□□ -0.32
KDM4C-211ENST00000494570 CFAP74Q9C0B2 1584 aa13.03□□□□□ -0.32
KDM4C-211ENST00000494570 RICTORQ6R327 1708 aa13.03□□□□□ -0.32
KDM4C-211ENST00000494570 TRAPPC8Q9Y2L5 1435 aa13.03□□□□□ -0.32
KDM4C-211ENST00000494570 ZMYM4Q5VZL5 1548 aa13.03□□□□□ -0.32
KDM4C-211ENST00000494570 MYO5CQ9NQX4 1742 aa13.02□□□□□ -0.32
KDM4C-211ENST00000494570 CHRDL2Q6WN34 429 aa13.02□□□□□ -0.33
KDM4C-211ENST00000494570 CCNB3Q8WWL7 1395 aa13.02□□□□□ -0.33
KDM4C-211ENST00000494570 EHBP1L1Q8N3D4 1523 aa13.02□□□□□ -0.33
KDM4C-211ENST00000494570 TIAM1Q13009 1591 aa13.02□□□□□ -0.33
KDM4C-211ENST00000494570 CDC42BPBQ9Y5S2 1711 aa13.02□□□□□ -0.33
KDM4C-211ENST00000494570 CFDP1Q9UEE9 299 aaPredicted RBP13.01□□□□□ -0.33
KDM4C-211ENST00000494570 ZNF644Q9H582 1327 aaPredicted RBP13.01□□□□□ -0.33
KDM4C-211ENST00000494570 LRRC9Q6ZRR7 1453 aa13.01□□□□□ -0.33
KDM4C-211ENST00000494570 MAP3K1Q13233 1512 aa13.01□□□□□ -0.33
KDM4C-211ENST00000494570 PREX2Q70Z35 1606 aa13.01□□□□□ -0.33
KDM4C-211ENST00000494570 ABCC1P33527 1531 aa13□□□□□ -0.33
KDM4C-211ENST00000494570 MAGI2Q86UL8 1455 aa13□□□□□ -0.33
KDM4C-211ENST00000494570 NCOA2Q15596 1464 aa12.99□□□□□ -0.33
KDM4C-211ENST00000494570 HNRNPMP52272 730 aaKnown RBP eCLIP12.99□□□□□ -0.33
KDM4C-211ENST00000494570 ZNF777Q9ULD5 760 aaPredicted RBP12.99□□□□□ -0.33
KDM4C-211ENST00000494570 CDC42BPAQ5VT25 1732 aa12.99□□□□□ -0.33
KDM4C-211ENST00000494570 ARHGEF40Q8TER5 1519 aa12.98□□□□□ -0.33
KDM4C-211ENST00000494570 ZNF518AQ6AHZ1 1483 aa12.98□□□□□ -0.33
KDM4C-211ENST00000494570 KIAA1107Q9UPP5 1409 aa12.98□□□□□ -0.33
KDM4C-211ENST00000494570 KDM5CP41229 1560 aa12.98□□□□□ -0.33
KDM4C-211ENST00000494570 SAMD9LQ8IVG5 1584 aa12.98□□□□□ -0.33
KDM4C-211ENST00000494570 ZFYVE16Q7Z3T8 1539 aa12.97□□□□□ -0.33
KDM4C-211ENST00000494570 MLH3Q9UHC1 1453 aa12.97□□□□□ -0.33
KDM4C-211ENST00000494570 MBD5Q9P267 1494 aa12.96□□□□□ -0.34
KDM4C-211ENST00000494570 ATP10AO60312 1499 aa12.95□□□□□ -0.34
KDM4C-211ENST00000494570 REM2Q8IYK8 340 aaPredicted RBP12.94□□□□□ -0.34
KDM4C-211ENST00000494570 SIGLEC1Q9BZZ2 1709 aa12.93□□□□□ -0.34
KDM4C-211ENST00000494570 SYCP2Q9BX26 1530 aa12.93□□□□□ -0.34
KDM4C-211ENST00000494570 ARID4BQ4LE39 1312 aaPredicted RBP12.92□□□□□ -0.34
KDM4C-211ENST00000494570 PLEKHH2Q8IVE3 1493 aa12.92□□□□□ -0.34
KDM4C-211ENST00000494570 MKRN4PQ13434 485 aaPredicted RBP12.92□□□□□ -0.34
KDM4C-211ENST00000494570 C9orf84Q5VXU9 1444 aa12.91□□□□□ -0.34
KDM4C-211ENST00000494570 ITSN2Q9NZM3 1697 aa12.91□□□□□ -0.34
KDM4C-211ENST00000494570 SPAG9O60271 1321 aaKnown RBP12.9□□□□□ -0.34
KDM4C-211ENST00000494570 SUPT6HQ7KZ85 1726 aaKnown RBP12.9□□□□□ -0.34
KDM4C-211ENST00000494570 DIP2CQ9Y2E4 1556 aa12.9□□□□□ -0.35
KDM4C-211ENST00000494570 ADAMTSL3P82987 1691 aa12.89□□□□□ -0.35
KDM4C-211ENST00000494570 SPDYE2BA6NHP3 402 aa12.89□□□□□ -0.35
KDM4C-211ENST00000494570 SPDYE6P0CI01 402 aa12.89□□□□□ -0.35
KDM4C-211ENST00000494570 SPDYE2Q495Y8 402 aa12.89□□□□□ -0.35
KDM4C-211ENST00000494570 HECW2Q9P2P5 1572 aa12.89□□□□□ -0.35
KDM4C-211ENST00000494570 CAMSAP2Q08AD1 1489 aa12.88□□□□□ -0.35
KDM4C-211ENST00000494570 BCORL1Q5H9F3 1711 aa12.88□□□□□ -0.35
KDM4C-211ENST00000494570 ABCA6Q8N139 1617 aa12.88□□□□□ -0.35
KDM4C-211ENST00000494570 MYOM3Q5VTT5 1437 aa12.88□□□□□ -0.35
KDM4C-211ENST00000494570 KIDINS220Q9ULH0 1771 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 216.7 ms