RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 FAM212AQ96EL1 285 aa12.83□□□□□ -0.36
RBM39-238ENST00000493853 CUL7Q14999 1698 aa12.82□□□□□ -0.36
RBM39-238ENST00000493853 RUSC2Q8N2Y8 1516 aa12.82□□□□□ -0.36
RBM39-238ENST00000493853 GALR2O43603 387 aaPredicted RBP12.81□□□□□ -0.36
RBM39-238ENST00000493853 PTPRGP23470 1445 aa12.8□□□□□ -0.36
RBM39-238ENST00000493853 CARMIL2Q6F5E8 1435 aa12.8□□□□□ -0.36
RBM39-238ENST00000493853 IFNLR1Q8IU57 520 aaPredicted RBP12.8□□□□□ -0.36
RBM39-238ENST00000493853 DCAF8Q5TAQ9 597 aa12.79□□□□□ -0.36
RBM39-238ENST00000493853 DCBLD2Q96PD2 775 aa12.78□□□□□ -0.36
RBM39-238ENST00000493853 TNIKQ9UKE5 1360 aa12.76□□□□□ -0.37
RBM39-238ENST00000493853 RAPGEF2Q9Y4G8 1499 aa12.74□□□□□ -0.37
RBM39-238ENST00000493853 SPOCK2Q92563 424 aa12.74□□□□□ -0.37
RBM39-238ENST00000493853 KIF12Q96FN5 646 aa12.74□□□□□ -0.37
RBM39-238ENST00000493853 MS4A3Q96HJ5 214 aa12.74□□□□□ -0.37
RBM39-238ENST00000493853 ABCC10Q5T3U5 1492 aa12.73□□□□□ -0.37
RBM39-238ENST00000493853 MAP3K13O43283 966 aa12.71□□□□□ -0.37
RBM39-238ENST00000493853 FAM9AQ8IZU1 332 aaPredicted RBP12.71□□□□□ -0.37
RBM39-238ENST00000493853 IQGAP2Q13576 1575 aa12.7□□□□□ -0.38
RBM39-238ENST00000493853 MAPKBP1O60336 1514 aa12.7□□□□□ -0.38
RBM39-238ENST00000493853 POTEIP0CG38 1075 aa12.69□□□□□ -0.38
RBM39-238ENST00000493853 GSE1Q14687 1217 aa12.69□□□□□ -0.38
RBM39-238ENST00000493853 ADCY10Q96PN6 1610 aa12.69□□□□□ -0.38
RBM39-238ENST00000493853 UACAQ9BZF9 1416 aa12.67□□□□□ -0.38
RBM39-238ENST00000493853 ABCC2Q92887 1545 aa12.66□□□□□ -0.38
RBM39-238ENST00000493853 PCDHB13Q9Y5F0 798 aa12.65□□□□□ -0.38
RBM39-238ENST00000493853 DISP1Q96F81 1524 aa12.64□□□□□ -0.39
RBM39-238ENST00000493853 PYGBP11216 843 aa12.64□□□□□ -0.39
RBM39-238ENST00000493853 CIZ1Q9ULV3 898 aaPredicted RBP12.64□□□□□ -0.39
RBM39-238ENST00000493853 PLB1Q6P1J6 1458 aa12.64□□□□□ -0.39
RBM39-238ENST00000493853 ASXL2Q76L83 1435 aa12.63□□□□□ -0.39
RBM39-238ENST00000493853 UHRF1BP1LA0JNW5 1464 aa12.63□□□□□ -0.39
RBM39-238ENST00000493853 UGGT2Q9NYU1 1516 aa12.62□□□□□ -0.39
RBM39-238ENST00000493853 DIP2BQ9P265 1576 aa12.62□□□□□ -0.39
RBM39-238ENST00000493853 SGIP1Q9BQI5 828 aa12.62□□□□□ -0.39
RBM39-238ENST00000493853 KIF13AQ9H1H9 1805 aa12.62□□□□□ -0.39
RBM39-238ENST00000493853 GOLGA3Q08378 1498 aa12.6□□□□□ -0.39
RBM39-238ENST00000493853 P3H3Q8IVL6 736 aa12.59□□□□□ -0.39
RBM39-238ENST00000493853 PRXQ9BXM0 1461 aa12.59□□□□□ -0.39
RBM39-238ENST00000493853 KCNH8Q96L42 1107 aa12.57□□□□□ -0.4
RBM39-238ENST00000493853 TRPC6Q9Y210 931 aa12.57□□□□□ -0.4
RBM39-238ENST00000493853 KDM5BQ9UGL1 1544 aa12.57□□□□□ -0.4
RBM39-238ENST00000493853 KIAA0556O60303 1618 aa12.56□□□□□ -0.4
RBM39-238ENST00000493853 IFNL1Q8IU54 200 aa12.56□□□□□ -0.4
RBM39-238ENST00000493853 ATMINO43313 823 aaPredicted RBP12.55□□□□□ -0.4
RBM39-238ENST00000493853 RANGAP1P46060 587 aaPredicted RBP12.55□□□□□ -0.4
RBM39-238ENST00000493853 ASTLQ6HA08 431 aaPredicted RBP12.55□□□□□ -0.4
RBM39-238ENST00000493853 KDM6BO15054 1643 aa12.55□□□□□ -0.4
RBM39-238ENST00000493853 ARID3CA6NKF2 412 aa12.53□□□□□ -0.4
RBM39-238ENST00000493853 TIE1P35590 1138 aa12.53□□□□□ -0.4
RBM39-238ENST00000493853 EPRSP07814 1512 aaKnown RBP12.52□□□□□ -0.4
RBM39-238ENST00000493853 BMP2KQ9NSY1 1161 aaPredicted RBP12.52□□□□□ -0.41
RBM39-238ENST00000493853 GLI2P10070 1586 aa12.52□□□□□ -0.41
RBM39-238ENST00000493853 TSPOAP1O95153 1857 aa12.51□□□□□ -0.41
RBM39-238ENST00000493853 CHRM1P11229 460 aaPredicted RBP12.51□□□□□ -0.41
RBM39-238ENST00000493853 PELP1Q8IZL8 1130 aaKnown RBP12.51□□□□□ -0.41
RBM39-238ENST00000493853 EEA1Q15075 1411 aa12.51□□□□□ -0.41
RBM39-238ENST00000493853 ATN1P54259 1190 aaPredicted RBP12.5□□□□□ -0.41
RBM39-238ENST00000493853 PCDHB8Q9UN66 801 aa12.5□□□□□ -0.41
RBM39-238ENST00000493853 TEX14Q8IWB6 1497 aa12.5□□□□□ -0.41
RBM39-238ENST00000493853 WDR7Q9Y4E6 1490 aa12.5□□□□□ -0.41
RBM39-238ENST00000493853 CTTNBP2Q8WZ74 1663 aa12.48□□□□□ -0.41
RBM39-238ENST00000493853 KDM4FA0A1W2PPD8 638 aa12.48□□□□□ -0.41
RBM39-238ENST00000493853 ZCCHC11Q5TAX3 1644 aaKnown RBP12.48□□□□□ -0.41
RBM39-238ENST00000493853 CD109Q6YHK3 1445 aa12.47□□□□□ -0.41
RBM39-238ENST00000493853 TTLL13PA6NNM8 815 aa12.46□□□□□ -0.41
RBM39-238ENST00000493853 LHX8Q68G74 356 aa12.46□□□□□ -0.41
RBM39-238ENST00000493853 ZNF467Q7Z7K2 595 aaPredicted RBP12.46□□□□□ -0.41
RBM39-238ENST00000493853 ABCA8O94911 1581 aa12.45□□□□□ -0.42
RBM39-238ENST00000493853 SLC39A7Q92504 469 aa12.45□□□□□ -0.42
RBM39-238ENST00000493853 TMEM106CQ9BVX2 250 aa12.45□□□□□ -0.42
RBM39-238ENST00000493853 UBTFP17480 764 aaKnown RBP12.44□□□□□ -0.42
RBM39-238ENST00000493853 METRNQ9UJH8 293 aa12.43□□□□□ -0.42
RBM39-238ENST00000493853 COL17A1Q9UMD9 1497 aaPredicted RBP12.42□□□□□ -0.42
RBM39-238ENST00000493853 C7P10643 843 aa12.42□□□□□ -0.42
RBM39-238ENST00000493853 ATP10BO94823 1461 aa12.41□□□□□ -0.42
RBM39-238ENST00000493853 PLEKHD1A6NEE1 506 aa12.41□□□□□ -0.42
RBM39-238ENST00000493853 MAP3K4Q9Y6R4 1608 aa12.4□□□□□ -0.42
RBM39-238ENST00000493853 TRIM35Q9UPQ4 493 aa12.4□□□□□ -0.42
RBM39-238ENST00000493853 MAGI3Q5TCQ9 1506 aa12.39□□□□□ -0.43
RBM39-238ENST00000493853 ATP1B4Q9UN42 357 aaPredicted RBP12.39□□□□□ -0.43
RBM39-238ENST00000493853 PPRC1Q5VV67 1664 aaKnown RBP12.38□□□□□ -0.43
RBM39-238ENST00000493853 FHOD3Q2V2M9 1422 aa12.37□□□□□ -0.43
RBM39-238ENST00000493853 PHLDB1Q86UU1 1377 aa12.35□□□□□ -0.43
RBM39-238ENST00000493853 SAMD9Q5K651 1589 aa12.35□□□□□ -0.43
RBM39-238ENST00000493853 ADGRL1O94910 1474 aa12.34□□□□□ -0.43
RBM39-238ENST00000493853 PSEN1P49768 467 aa12.34□□□□□ -0.43
RBM39-238ENST00000493853 CFAP43Q8NDM7 1665 aa12.33□□□□□ -0.44
RBM39-238ENST00000493853 SEC24BO95487 1268 aa12.33□□□□□ -0.44
RBM39-238ENST00000493853 RAPGEF6Q8TEU7 1601 aa12.33□□□□□ -0.44
RBM39-238ENST00000493853 RAPGEF3O95398 923 aa12.32□□□□□ -0.44
RBM39-238ENST00000493853 PDAP1Q13442 181 aaKnown RBP12.32□□□□□ -0.44
RBM39-238ENST00000493853 NUP153P49790 1475 aaKnown RBP12.32□□□□□ -0.44
RBM39-238ENST00000493853 CDK11AQ9UQ88 783 aaPredicted RBP12.31□□□□□ -0.44
RBM39-238ENST00000493853 KIF21BO75037 1637 aa12.3□□□□□ -0.44
RBM39-238ENST00000493853 POTEB2H3BUK9 544 aa12.3□□□□□ -0.44
RBM39-238ENST00000493853 IER5LQ5T953 404 aa12.3□□□□□ -0.44
RBM39-238ENST00000493853 ARID4BQ4LE39 1312 aaPredicted RBP12.3□□□□□ -0.44
RBM39-238ENST00000493853 EFCAB5A4FU69 1503 aa12.29□□□□□ -0.44
RBM39-238ENST00000493853 ARAP3Q8WWN8 1544 aa12.29□□□□□ -0.44
RBM39-238ENST00000493853 GOLGA2Q08379 1002 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms