RNA–Protein interactions for RNA: ENST00000493658.2

ARID1B-208, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 3

Gene ARID1B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-208ENST00000493658 MIER1Q8N108 512 aa20.01■□□□□ 0.79
ARID1B-208ENST00000493658 NEUROD1Q13562 356 aa20■□□□□ 0.79
ARID1B-208ENST00000493658 NUP153P49790 1475 aaKnown RBP19.98■□□□□ 0.79
ARID1B-208ENST00000493658 NUP160Q12769 1436 aa19.96■□□□□ 0.79
ARID1B-208ENST00000493658 ADCY10Q96PN6 1610 aa19.93■□□□□ 0.78
ARID1B-208ENST00000493658 ITSN2Q9NZM3 1697 aa19.92■□□□□ 0.78
ARID1B-208ENST00000493658 CARMIL2Q6F5E8 1435 aa19.92■□□□□ 0.78
ARID1B-208ENST00000493658 DNMT1P26358 1616 aaKnown RBP19.91■□□□□ 0.78
ARID1B-208ENST00000493658 SIN3AQ96ST3 1273 aa19.89■□□□□ 0.77
ARID1B-208ENST00000493658 CDK11AQ9UQ88 783 aaPredicted RBP19.88■□□□□ 0.77
ARID1B-208ENST00000493658 TSPOAP1O95153 1857 aa19.87■□□□□ 0.77
ARID1B-208ENST00000493658 TROQ12816 1431 aaPredicted RBP19.86■□□□□ 0.77
ARID1B-208ENST00000493658 ROCK1Q13464 1354 aa19.85■□□□□ 0.77
ARID1B-208ENST00000493658 DAPK1P53355 1430 aa19.84■□□□□ 0.77
ARID1B-208ENST00000493658 TONSLQ96HA7 1378 aa19.83■□□□□ 0.77
ARID1B-208ENST00000493658 SPATA31D1Q6ZQQ2 1576 aa19.83■□□□□ 0.77
ARID1B-208ENST00000493658 ADGBQ8N7X0 1667 aa19.82■□□□□ 0.76
ARID1B-208ENST00000493658 PPP1R15AO75807 674 aaPredicted RBP19.82■□□□□ 0.76
ARID1B-208ENST00000493658 NPM1P06748 294 aaKnown RBP eCLIP19.82■□□□□ 0.76
ARID1B-208ENST00000493658 ABCA8O94911 1581 aa19.82■□□□□ 0.76
ARID1B-208ENST00000493658 YTHDC1Q96MU7 727 aaKnown RBP19.8■□□□□ 0.76
ARID1B-208ENST00000493658 PLB1Q6P1J6 1458 aa19.79■□□□□ 0.76
ARID1B-208ENST00000493658 CROCC2H7BZ55 1655 aa19.79■□□□□ 0.76
ARID1B-208ENST00000493658 SHROOM2Q13796 1616 aa19.78■□□□□ 0.76
ARID1B-208ENST00000493658 ARID3CA6NKF2 412 aa19.77■□□□□ 0.76
ARID1B-208ENST00000493658 ABCC5O15440 1437 aa19.76■□□□□ 0.75
ARID1B-208ENST00000493658 KIF14Q15058 1648 aa19.76■□□□□ 0.75
ARID1B-208ENST00000493658 CAMSAP2Q08AD1 1489 aa19.76■□□□□ 0.75
ARID1B-208ENST00000493658 JPH4Q96JJ6 628 aa19.76■□□□□ 0.75
ARID1B-208ENST00000493658 RRP7BPQ9NSQ0 103 aa19.76■□□□□ 0.75
ARID1B-208ENST00000493658 GTF3C3Q9Y5Q9 886 aa19.76■□□□□ 0.75
ARID1B-208ENST00000493658 PRG4Q92954 1404 aaPredicted RBP19.76■□□□□ 0.75
ARID1B-208ENST00000493658 CHIC2Q9UKJ5 165 aa19.74■□□□□ 0.75
ARID1B-208ENST00000493658 KDM5BQ9UGL1 1544 aa19.74■□□□□ 0.75
ARID1B-208ENST00000493658 DENND4BO75064 1496 aaPredicted RBP19.73■□□□□ 0.75
ARID1B-208ENST00000493658 GPATCH8Q9UKJ3 1502 aaKnown RBP19.72■□□□□ 0.75
ARID1B-208ENST00000493658 ADGRL2O95490 1459 aa19.7■□□□□ 0.74
ARID1B-208ENST00000493658 CDC42BPAQ5VT25 1732 aa19.7■□□□□ 0.74
ARID1B-208ENST00000493658 TRIM52Q96A61 297 aa19.68■□□□□ 0.74
ARID1B-208ENST00000493658 CERKQ8TCT0 537 aa19.65■□□□□ 0.74
ARID1B-208ENST00000493658 ATP10BO94823 1461 aa19.65■□□□□ 0.74
ARID1B-208ENST00000493658 MPHOSPH9Q99550 1183 aa19.64■□□□□ 0.73
ARID1B-208ENST00000493658 CFDP1Q9UEE9 299 aaPredicted RBP19.64■□□□□ 0.73
ARID1B-208ENST00000493658 SHANK2Q9UPX8 1470 aa19.64■□□□□ 0.73
ARID1B-208ENST00000493658 COL17A1Q9UMD9 1497 aaPredicted RBP19.63■□□□□ 0.73
ARID1B-208ENST00000493658 ZNF644Q9H582 1327 aaPredicted RBP19.62■□□□□ 0.73
ARID1B-208ENST00000493658 PLEKHD1A6NEE1 506 aa19.6■□□□□ 0.73
ARID1B-208ENST00000493658 NCOA1Q15788 1441 aa19.59■□□□□ 0.73
ARID1B-208ENST00000493658 PPRC1Q5VV67 1664 aaKnown RBP19.59■□□□□ 0.73
ARID1B-208ENST00000493658 ARHGEF5Q12774 1597 aa19.59■□□□□ 0.73
ARID1B-208ENST00000493658 RPRD2Q5VT52 1461 aaKnown RBP19.59■□□□□ 0.73
ARID1B-208ENST00000493658 PTPRGP23470 1445 aa19.59■□□□□ 0.73
ARID1B-208ENST00000493658 ANKRD30BQ9BXX2 1392 aa19.57■□□□□ 0.72
ARID1B-208ENST00000493658 ANKRD30AQ9BXX3 1397 aa19.57■□□□□ 0.72
ARID1B-208ENST00000493658 PZPP20742 1482 aa19.57■□□□□ 0.72
ARID1B-208ENST00000493658 DDX10Q13206 875 aaKnown RBP19.57■□□□□ 0.72
ARID1B-208ENST00000493658 PREX2Q70Z35 1606 aa19.57■□□□□ 0.72
ARID1B-208ENST00000493658 PELP1Q8IZL8 1130 aaKnown RBP19.54■□□□□ 0.72
ARID1B-208ENST00000493658 TEX14Q8IWB6 1497 aa19.54■□□□□ 0.72
ARID1B-208ENST00000493658 KDM5DQ9BY66 1539 aa19.51■□□□□ 0.71
ARID1B-208ENST00000493658 C9orf84Q5VXU9 1444 aa19.51■□□□□ 0.71
ARID1B-208ENST00000493658 CCER2I3L3R5 266 aa19.5■□□□□ 0.71
ARID1B-208ENST00000493658 CDC42BPBQ9Y5S2 1711 aa19.5■□□□□ 0.71
ARID1B-208ENST00000493658 ZNF777Q9ULD5 760 aaPredicted RBP19.49■□□□□ 0.71
ARID1B-208ENST00000493658 KIAA1107Q9UPP5 1409 aa19.49■□□□□ 0.71
ARID1B-208ENST00000493658 ABCC2Q92887 1545 aa19.48■□□□□ 0.71
ARID1B-208ENST00000493658 SLC4A1APQ9BWU0 796 aaKnown RBP19.48■□□□□ 0.71
ARID1B-208ENST00000493658 ANKRD50Q9ULJ7 1429 aa19.47■□□□□ 0.71
ARID1B-208ENST00000493658 GLI2P10070 1586 aa19.47■□□□□ 0.71
ARID1B-208ENST00000493658 SAMD9LQ8IVG5 1584 aa19.47■□□□□ 0.71
ARID1B-208ENST00000493658 POLR1AO95602 1720 aaPredicted RBP19.46■□□□□ 0.71
ARID1B-208ENST00000493658 ANP32CO43423 234 aa19.46■□□□□ 0.71
ARID1B-208ENST00000493658 MAST1Q9Y2H9 1570 aa19.45■□□□□ 0.7
ARID1B-208ENST00000493658 L3MBTL2Q969R5 705 aa19.45■□□□□ 0.7
ARID1B-208ENST00000493658 HIRIP3Q9BW71 556 aaPredicted RBP19.45■□□□□ 0.7
ARID1B-208ENST00000493658 CCDC141Q6ZP82 1450 aa19.44■□□□□ 0.7
ARID1B-208ENST00000493658 MYO5CQ9NQX4 1742 aa19.44■□□□□ 0.7
ARID1B-208ENST00000493658 PTPRMP28827 1452 aa19.43■□□□□ 0.7
ARID1B-208ENST00000493658 MBD5Q9P267 1494 aa19.43■□□□□ 0.7
ARID1B-208ENST00000493658 EIF4G2P78344 907 aaKnown RBP eCLIP19.43■□□□□ 0.7
ARID1B-208ENST00000493658 FOXD1Q16676 465 aa19.43■□□□□ 0.7
ARID1B-208ENST00000493658 HSPA5P11021 654 aaKnown RBP19.42■□□□□ 0.7
ARID1B-208ENST00000493658 TTC37Q6PGP7 1564 aa19.41■□□□□ 0.7
ARID1B-208ENST00000493658 PLEKHH2Q8IVE3 1493 aa19.39■□□□□ 0.69
ARID1B-208ENST00000493658 UHRF1BP1LA0JNW5 1464 aa19.38■□□□□ 0.69
ARID1B-208ENST00000493658 TSPY4P0CV99 314 aa19.38■□□□□ 0.69
ARID1B-208ENST00000493658 TSPY10P0CW01 314 aa19.38■□□□□ 0.69
ARID1B-208ENST00000493658 RSPH4AQ5TD94 716 aa19.38■□□□□ 0.69
ARID1B-208ENST00000493658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.38■□□□□ 0.69
ARID1B-208ENST00000493658 KIF15Q9NS87 1388 aa19.37■□□□□ 0.69
ARID1B-208ENST00000493658 PLXNC1O60486 1568 aa19.36■□□□□ 0.69
ARID1B-208ENST00000493658 ARHGAP5Q13017 1502 aa19.36■□□□□ 0.69
ARID1B-208ENST00000493658 KCNH8Q96L42 1107 aa19.36■□□□□ 0.69
ARID1B-208ENST00000493658 ZCCHC11Q5TAX3 1644 aaKnown RBP19.36■□□□□ 0.69
ARID1B-208ENST00000493658 ARHGEF12Q9NZN5 1544 aa19.35■□□□□ 0.69
ARID1B-208ENST00000493658 CNTLNQ9NXG0 1405 aa19.35■□□□□ 0.69
ARID1B-208ENST00000493658 UNC13BO14795 1591 aa19.35■□□□□ 0.69
ARID1B-208ENST00000493658 WASHC2AQ641Q2 1341 aa19.34■□□□□ 0.69
ARID1B-208ENST00000493658 SYCP2Q9BX26 1530 aa19.34■□□□□ 0.69
ARID1B-208ENST00000493658 PKD2Q13563 968 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms