RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 DDX10Q13206 875 aaKnown RBP26.91■■□□□ 1.9
TSC22D4-205ENST00000493217 ZNF644Q9H582 1327 aaPredicted RBP26.9■■□□□ 1.9
TSC22D4-205ENST00000493217 TRIM52Q96A61 297 aa26.9■■□□□ 1.9
TSC22D4-205ENST00000493217 MPHOSPH9Q99550 1183 aa26.86■■□□□ 1.89
TSC22D4-205ENST00000493217 HIRIP3Q9BW71 556 aaPredicted RBP26.85■■□□□ 1.89
TSC22D4-205ENST00000493217 ADCY10Q96PN6 1610 aa26.84■■□□□ 1.89
TSC22D4-205ENST00000493217 GPATCH8Q9UKJ3 1502 aaKnown RBP26.82■■□□□ 1.88
TSC22D4-205ENST00000493217 ITSN2Q9NZM3 1697 aa26.81■■□□□ 1.88
TSC22D4-205ENST00000493217 CFDP1Q9UEE9 299 aaPredicted RBP26.8■■□□□ 1.88
TSC22D4-205ENST00000493217 CAMSAP2Q08AD1 1489 aa26.8■■□□□ 1.88
TSC22D4-205ENST00000493217 KIF14Q15058 1648 aa26.8■■□□□ 1.88
TSC22D4-205ENST00000493217 ABCA8O94911 1581 aa26.79■■□□□ 1.88
TSC22D4-205ENST00000493217 KCNH8Q96L42 1107 aa26.77■■□□□ 1.88
TSC22D4-205ENST00000493217 PELP1Q8IZL8 1130 aaKnown RBP26.74■■□□□ 1.87
TSC22D4-205ENST00000493217 ATP10BO94823 1461 aa26.72■■□□□ 1.87
TSC22D4-205ENST00000493217 ANKRD30BQ9BXX2 1392 aa26.72■■□□□ 1.87
TSC22D4-205ENST00000493217 NCOA1Q15788 1441 aa26.71■■□□□ 1.87
TSC22D4-205ENST00000493217 PLEKHD1A6NEE1 506 aa26.7■■□□□ 1.87
TSC22D4-205ENST00000493217 FOXD1Q16676 465 aa26.7■■□□□ 1.87
TSC22D4-205ENST00000493217 ADGRL2O95490 1459 aa26.68■■□□□ 1.86
TSC22D4-205ENST00000493217 ADGBQ8N7X0 1667 aa26.67■■□□□ 1.86
TSC22D4-205ENST00000493217 ABCC10Q5T3U5 1492 aa26.66■■□□□ 1.86
TSC22D4-205ENST00000493217 RPRD2Q5VT52 1461 aaKnown RBP26.66■■□□□ 1.86
TSC22D4-205ENST00000493217 L3MBTL2Q969R5 705 aa26.66■■□□□ 1.86
TSC22D4-205ENST00000493217 CROCC2H7BZ55 1655 aa26.66■■□□□ 1.86
TSC22D4-205ENST00000493217 ZNF777Q9ULD5 760 aaPredicted RBP26.66■■□□□ 1.86
TSC22D4-205ENST00000493217 SLC4A1APQ9BWU0 796 aaKnown RBP26.64■■□□□ 1.86
TSC22D4-205ENST00000493217 CDC42BPAQ5VT25 1732 aa26.63■■□□□ 1.85
TSC22D4-205ENST00000493217 CCER2I3L3R5 266 aa26.63■■□□□ 1.85
TSC22D4-205ENST00000493217 ANP32CO43423 234 aa26.62■■□□□ 1.85
TSC22D4-205ENST00000493217 PZPP20742 1482 aa26.61■■□□□ 1.85
TSC22D4-205ENST00000493217 PTPRGP23470 1445 aa26.61■■□□□ 1.85
TSC22D4-205ENST00000493217 HSPA5P11021 654 aaKnown RBP26.59■■□□□ 1.85
TSC22D4-205ENST00000493217 ANKRD30AQ9BXX3 1397 aa26.59■■□□□ 1.85
TSC22D4-205ENST00000493217 TEX14Q8IWB6 1497 aa26.58■■□□□ 1.85
TSC22D4-205ENST00000493217 EIF4G2P78344 907 aaKnown RBP eCLIP26.55■■□□□ 1.84
TSC22D4-205ENST00000493217 CHD1O14646 1710 aa26.55■■□□□ 1.84
TSC22D4-205ENST00000493217 SHANK2Q9UPX8 1470 aa26.54■■□□□ 1.84
TSC22D4-205ENST00000493217 WASHC2AQ641Q2 1341 aa26.52■■□□□ 1.84
TSC22D4-205ENST00000493217 ANKRD50Q9ULJ7 1429 aa26.52■■□□□ 1.84
TSC22D4-205ENST00000493217 C9orf84Q5VXU9 1444 aa26.49■■□□□ 1.83
TSC22D4-205ENST00000493217 SHROOM2Q13796 1616 aa26.49■■□□□ 1.83
TSC22D4-205ENST00000493217 NBPF8Q3BBV2 869 aa26.49■■□□□ 1.83
TSC22D4-205ENST00000493217 KIAA1107Q9UPP5 1409 aa26.49■■□□□ 1.83
TSC22D4-205ENST00000493217 SUPT16HQ9Y5B9 1047 aaKnown RBP26.45■■□□□ 1.82
TSC22D4-205ENST00000493217 ARHGEF5Q12774 1597 aa26.44■■□□□ 1.82
TSC22D4-205ENST00000493217 TSPY4P0CV99 314 aa26.44■■□□□ 1.82
TSC22D4-205ENST00000493217 TSPY10P0CW01 314 aa26.44■■□□□ 1.82
TSC22D4-205ENST00000493217 MBD5Q9P267 1494 aa26.43■■□□□ 1.82
TSC22D4-205ENST00000493217 PKD2Q13563 968 aa26.42■■□□□ 1.82
TSC22D4-205ENST00000493217 HNRNPMP52272 730 aaKnown RBP eCLIP26.4■■□□□ 1.825e-8■□□□□ 11
TSC22D4-205ENST00000493217 CDC42BPBQ9Y5S2 1711 aa26.4■■□□□ 1.82
TSC22D4-205ENST00000493217 SPATA31E1Q6ZUB1 1445 aa26.39■■□□□ 1.82
TSC22D4-205ENST00000493217 PREX2Q70Z35 1606 aa26.39■■□□□ 1.82
TSC22D4-205ENST00000493217 SAMD9LQ8IVG5 1584 aa26.38■■□□□ 1.81
TSC22D4-205ENST00000493217 C11orf95C9JLR9 678 aaPredicted RBP26.37■■□□□ 1.81
TSC22D4-205ENST00000493217 KDM5DQ9BY66 1539 aa26.37■■□□□ 1.81
TSC22D4-205ENST00000493217 NUP155O75694 1391 aa26.37■■□□□ 1.81
TSC22D4-205ENST00000493217 KIF15Q9NS87 1388 aa26.36■■□□□ 1.81
TSC22D4-205ENST00000493217 CCDC7Q96M83 1385 aa26.35■■□□□ 1.81
TSC22D4-205ENST00000493217 CCDC141Q6ZP82 1450 aa26.34■■□□□ 1.81
TSC22D4-205ENST00000493217 RSPH4AQ5TD94 716 aa26.34■■□□□ 1.81
TSC22D4-205ENST00000493217 CNTLNQ9NXG0 1405 aa26.34■■□□□ 1.81
TSC22D4-205ENST00000493217 ERCC6L2Q5T890 1561 aa26.34■■□□□ 1.81
TSC22D4-205ENST00000493217 ABCC2Q92887 1545 aa26.32■■□□□ 1.8
TSC22D4-205ENST00000493217 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.29■■□□□ 1.88e-8■■■□□ 16.7
TSC22D4-205ENST00000493217 TTC37Q6PGP7 1564 aa26.29■■□□□ 1.8
TSC22D4-205ENST00000493217 POLR1AO95602 1720 aaPredicted RBP26.26■■□□□ 1.8
TSC22D4-205ENST00000493217 KIF7Q2M1P5 1343 aa26.24■■□□□ 1.79
TSC22D4-205ENST00000493217 ARHGAP5Q13017 1502 aa26.24■■□□□ 1.79
TSC22D4-205ENST00000493217 SYCP2Q9BX26 1530 aa26.24■■□□□ 1.79
TSC22D4-205ENST00000493217 UHRF1BP1Q6BDS2 1440 aa26.23■■□□□ 1.79
TSC22D4-205ENST00000493217 CLASP1Q7Z460 1538 aa26.22■■□□□ 1.79
TSC22D4-205ENST00000493217 MAST1Q9Y2H9 1570 aa26.22■■□□□ 1.79
TSC22D4-205ENST00000493217 ARHGEF12Q9NZN5 1544 aa26.2■■□□□ 1.78
TSC22D4-205ENST00000493217 MYO5CQ9NQX4 1742 aa26.19■■□□□ 1.78
TSC22D4-205ENST00000493217 PRKRIP1Q9H875 184 aaPredicted RBP26.18■■□□□ 1.78
TSC22D4-205ENST00000493217 FAM135AQ9P2D6 1515 aa26.18■■□□□ 1.78
TSC22D4-205ENST00000493217 USP47Q96K76 1375 aa26.18■■□□□ 1.78
TSC22D4-205ENST00000493217 PLEKHH2Q8IVE3 1493 aa26.17■■□□□ 1.78
TSC22D4-205ENST00000493217 UHRF1BP1LA0JNW5 1464 aa26.16■■□□□ 1.78
TSC22D4-205ENST00000493217 ZNF326Q5BKZ1 582 aaKnown RBP26.16■■□□□ 1.78
TSC22D4-205ENST00000493217 RALGAPBQ86X10 1494 aa26.15■■□□□ 1.78
TSC22D4-205ENST00000493217 KDM5CP41229 1560 aa26.14■■□□□ 1.78
TSC22D4-205ENST00000493217 ZCCHC11Q5TAX3 1644 aaKnown RBP26.13■■□□□ 1.77
TSC22D4-205ENST00000493217 PLXNC1O60486 1568 aa26.11■■□□□ 1.77
TSC22D4-205ENST00000493217 BCORL1Q5H9F3 1711 aa26.11■■□□□ 1.77
TSC22D4-205ENST00000493217 PLCH2O75038 1416 aa26.11■■□□□ 1.77
TSC22D4-205ENST00000493217 UNC13BO14795 1591 aa26.1■■□□□ 1.77
TSC22D4-205ENST00000493217 HNRNPUQ00839 825 aaKnown RBP eCLIP26.1■■□□□ 1.77
TSC22D4-205ENST00000493217 FKBP8Q14318 412 aa26.1■■□□□ 1.77
TSC22D4-205ENST00000493217 CCDC184Q52MB2 194 aa26.1■■□□□ 1.77
TSC22D4-205ENST00000493217 ARID4BQ4LE39 1312 aaPredicted RBP26.09■■□□□ 1.77
TSC22D4-205ENST00000493217 DCAF11Q8TEB1 546 aa26.05■■□□□ 1.76
TSC22D4-205ENST00000493217 CARD11Q9BXL7 1154 aa26.04■■□□□ 1.76
TSC22D4-205ENST00000493217 DUOX2Q9NRD8 1548 aa26.04■■□□□ 1.76
TSC22D4-205ENST00000493217 EFCAB2Q5VUJ9 269 aa26.03■■□□□ 1.76
TSC22D4-205ENST00000493217 KDM2AQ9Y2K7 1162 aa26.03■■□□□ 1.76
TSC22D4-205ENST00000493217 DHX29Q7Z478 1369 aaKnown RBP26.02■■□□□ 1.76
TSC22D4-205ENST00000493217 CCDC144AA2RUR9 1427 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms