RNA–Protein interactions for RNA: ENST00000492932.5

PDCD4-210, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-210ENST00000492932 ZFYVE16Q7Z3T8 1539 aa18.88■□□□□ 0.61
PDCD4-210ENST00000492932 ZMYM4Q5VZL5 1548 aa18.87■□□□□ 0.61
PDCD4-210ENST00000492932 CCDC18Q5T9S5 1454 aa18.86■□□□□ 0.61
PDCD4-210ENST00000492932 ARHGAP5Q13017 1502 aa18.84■□□□□ 0.61
PDCD4-210ENST00000492932 CASKIN1Q8WXD9 1431 aa18.83■□□□□ 0.61
PDCD4-210ENST00000492932 MADDQ8WXG6 1647 aa18.83■□□□□ 0.61
PDCD4-210ENST00000492932 MYT1LQ9UL68 1186 aa18.82■□□□□ 0.6
PDCD4-210ENST00000492932 YEATS2Q9ULM3 1422 aa18.81■□□□□ 0.6
PDCD4-210ENST00000492932 PCF11O94913 1555 aaKnown RBP18.81■□□□□ 0.6
PDCD4-210ENST00000492932 ZNF518AQ6AHZ1 1483 aa18.79■□□□□ 0.6
PDCD4-210ENST00000492932 LRRIQ1Q96JM4 1722 aa18.79■□□□□ 0.6
PDCD4-210ENST00000492932 RIMS1Q86UR5 1692 aaKnown RBP18.79■□□□□ 0.6
PDCD4-210ENST00000492932 MLECQ14165 292 aa18.78■□□□□ 0.6
PDCD4-210ENST00000492932 FYCO1Q9BQS8 1478 aa18.77■□□□□ 0.6
PDCD4-210ENST00000492932 PLPPR3Q6T4P5 718 aa18.77■□□□□ 0.6
PDCD4-210ENST00000492932 ATP10AO60312 1499 aa18.77■□□□□ 0.59
PDCD4-210ENST00000492932 C9orf84Q5VXU9 1444 aa18.75■□□□□ 0.59
PDCD4-210ENST00000492932 ILDR1Q86SU0 546 aaPredicted RBP18.73■□□□□ 0.59
PDCD4-210ENST00000492932 AFAP1Q8N556 730 aa18.73■□□□□ 0.59
PDCD4-210ENST00000492932 PREX2Q70Z35 1606 aa18.72■□□□□ 0.59
PDCD4-210ENST00000492932 CDC42BPBQ9Y5S2 1711 aa18.71■□□□□ 0.59
PDCD4-210ENST00000492932 KDM5CP41229 1560 aa18.7■□□□□ 0.58
PDCD4-210ENST00000492932 FER1L4A9Z1Z3 1794 aa18.7■□□□□ 0.58
PDCD4-210ENST00000492932 SIGLEC1Q9BZZ2 1709 aa18.68■□□□□ 0.58
PDCD4-210ENST00000492932 ZNF777Q9ULD5 760 aaPredicted RBP18.67■□□□□ 0.58
PDCD4-210ENST00000492932 LMTK3Q96Q04 1460 aa18.66■□□□□ 0.58
PDCD4-210ENST00000492932 ABCC1P33527 1531 aa18.66■□□□□ 0.58
PDCD4-210ENST00000492932 MLH3Q9UHC1 1453 aa18.65■□□□□ 0.58
PDCD4-210ENST00000492932 ESF1Q9H501 851 aaKnown RBP18.65■□□□□ 0.58
PDCD4-210ENST00000492932 ARHGEF12Q9NZN5 1544 aa18.64■□□□□ 0.58
PDCD4-210ENST00000492932 MTUS2Q5JR59 1369 aa18.64■□□□□ 0.57
PDCD4-210ENST00000492932 ITSN2Q9NZM3 1697 aa18.63■□□□□ 0.57
PDCD4-210ENST00000492932 CDC42BPAQ5VT25 1732 aa18.63■□□□□ 0.57
PDCD4-210ENST00000492932 TRAPPC8Q9Y2L5 1435 aa18.63■□□□□ 0.57
PDCD4-210ENST00000492932 DIP2CQ9Y2E4 1556 aa18.63■□□□□ 0.57
PDCD4-210ENST00000492932 CCNB3Q8WWL7 1395 aa18.62■□□□□ 0.57
PDCD4-210ENST00000492932 REREQ9P2R6 1566 aa18.61■□□□□ 0.57
PDCD4-210ENST00000492932 CFDP1Q9UEE9 299 aaPredicted RBP18.61■□□□□ 0.57
PDCD4-210ENST00000492932 HSPA2P54652 639 aa18.6■□□□□ 0.57
PDCD4-210ENST00000492932 ABCA6Q8N139 1617 aa18.6■□□□□ 0.57
PDCD4-210ENST00000492932 GPATCH8Q9UKJ3 1502 aaKnown RBP18.59■□□□□ 0.57
PDCD4-210ENST00000492932 PLEKHH2Q8IVE3 1493 aa18.58■□□□□ 0.56
PDCD4-210ENST00000492932 CEP162Q5TB80 1403 aa18.57■□□□□ 0.56
PDCD4-210ENST00000492932 SAMD9LQ8IVG5 1584 aa18.56■□□□□ 0.56
PDCD4-210ENST00000492932 SPAG9O60271 1321 aaKnown RBP18.56■□□□□ 0.56
PDCD4-210ENST00000492932 SYCP2Q9BX26 1530 aa18.56■□□□□ 0.56
PDCD4-210ENST00000492932 CEBPAP49715 358 aaPredicted RBP18.56■□□□□ 0.56
PDCD4-210ENST00000492932 HNRNPMP52272 730 aaKnown RBP eCLIP18.56■□□□□ 0.56
PDCD4-210ENST00000492932 AGLP35573 1532 aa18.55■□□□□ 0.56
PDCD4-210ENST00000492932 PREX1Q8TCU6 1659 aa18.54■□□□□ 0.56
PDCD4-210ENST00000492932 FBXO41Q8TF61 875 aa18.54■□□□□ 0.56
PDCD4-210ENST00000492932 KIDINS220Q9ULH0 1771 aa18.54■□□□□ 0.56
PDCD4-210ENST00000492932 KIAA1107Q9UPP5 1409 aa18.54■□□□□ 0.56
PDCD4-210ENST00000492932 EHBP1L1Q8N3D4 1523 aa18.54■□□□□ 0.56
PDCD4-210ENST00000492932 UHRF1BP1Q6BDS2 1440 aa18.52■□□□□ 0.56
PDCD4-210ENST00000492932 CNTLNQ9NXG0 1405 aa18.5■□□□□ 0.55
PDCD4-210ENST00000492932 ATP7AQ04656 1500 aa18.49■□□□□ 0.55
PDCD4-210ENST00000492932 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
PDCD4-210ENST00000492932 C3P01024 1663 aa18.46■□□□□ 0.55
PDCD4-210ENST00000492932 TIAM1Q13009 1591 aa18.46■□□□□ 0.55
PDCD4-210ENST00000492932 SUPT6HQ7KZ85 1726 aaKnown RBP18.45■□□□□ 0.54
PDCD4-210ENST00000492932 INO80Q9ULG1 1556 aaPredicted RBP18.44■□□□□ 0.54
PDCD4-210ENST00000492932 A2MP01023 1474 aa18.44■□□□□ 0.54
PDCD4-210ENST00000492932 SETD1BQ9UPS6 1966 aaKnown RBP18.42■□□□□ 0.54
PDCD4-210ENST00000492932 ZNF644Q9H582 1327 aaPredicted RBP18.42■□□□□ 0.54
PDCD4-210ENST00000492932 GGT6Q6P531 493 aa18.41■□□□□ 0.54
PDCD4-210ENST00000492932 ADGBQ8N7X0 1667 aa18.41■□□□□ 0.54
PDCD4-210ENST00000492932 MROH2AA6NES4 1674 aa18.4■□□□□ 0.54
PDCD4-210ENST00000492932 NCOA2Q15596 1464 aa18.39■□□□□ 0.54
PDCD4-210ENST00000492932 RSPH4AQ5TD94 716 aa18.39■□□□□ 0.53
PDCD4-210ENST00000492932 ZMYM3Q14202 1370 aa18.39■□□□□ 0.53
PDCD4-210ENST00000492932 RTEL1-TNFRSF6BF6WH68 1400 aa18.39■□□□□ 0.53
PDCD4-210ENST00000492932 PLXNC1O60486 1568 aa18.38■□□□□ 0.53
PDCD4-210ENST00000492932 LOC105371045A0A1W2PR82 267 aa18.38■□□□□ 0.53
PDCD4-210ENST00000492932 CERKQ8TCT0 537 aa18.38■□□□□ 0.53
PDCD4-210ENST00000492932 PPP6R1Q9UPN7 881 aa18.38■□□□□ 0.53
PDCD4-210ENST00000492932 NPATQ14207 1427 aa18.38■□□□□ 0.53
PDCD4-210ENST00000492932 VPS8Q8N3P4 1428 aa18.38■□□□□ 0.53
PDCD4-210ENST00000492932 MBD5Q9P267 1494 aa18.37■□□□□ 0.53
PDCD4-210ENST00000492932 CLTCQ00610 1675 aaKnown RBP18.35■□□□□ 0.53
PDCD4-210ENST00000492932 CAMSAP2Q08AD1 1489 aa18.35■□□□□ 0.53
PDCD4-210ENST00000492932 CCDC141Q6ZP82 1450 aa18.35■□□□□ 0.53
PDCD4-210ENST00000492932 TSPY4P0CV99 314 aa18.34■□□□□ 0.53
PDCD4-210ENST00000492932 TSPY10P0CW01 314 aa18.34■□□□□ 0.53
PDCD4-210ENST00000492932 STRCQ7RTU9 1775 aa18.33■□□□□ 0.53
PDCD4-210ENST00000492932 DHX29Q7Z478 1369 aaKnown RBP18.32■□□□□ 0.52
PDCD4-210ENST00000492932 LRRC9Q6ZRR7 1453 aa18.32■□□□□ 0.52
PDCD4-210ENST00000492932 APLP2Q06481 763 aa18.31■□□□□ 0.52
PDCD4-210ENST00000492932 PTPRTO14522 1441 aa18.31■□□□□ 0.52
PDCD4-210ENST00000492932 KIF3BO15066 747 aa18.3■□□□□ 0.52
PDCD4-210ENST00000492932 MAP3K1Q13233 1512 aa18.28■□□□□ 0.52
PDCD4-210ENST00000492932 CAMSAP1Q5T5Y3 1602 aa18.27■□□□□ 0.52
PDCD4-210ENST00000492932 ARHGEF5Q12774 1597 aa18.27■□□□□ 0.52
PDCD4-210ENST00000492932 NCOA1Q15788 1441 aa18.27■□□□□ 0.52
PDCD4-210ENST00000492932 PTPRKQ15262 1439 aa18.26■□□□□ 0.51
PDCD4-210ENST00000492932 MYO3AQ8NEV4 1616 aa18.26■□□□□ 0.51
PDCD4-210ENST00000492932 WASHC2CQ9Y4E1 1318 aa18.24■□□□□ 0.51
PDCD4-210ENST00000492932 FAM135AQ9P2D6 1515 aa18.23■□□□□ 0.51
PDCD4-210ENST00000492932 CEP170BQ9Y4F5 1589 aaPredicted RBP18.23■□□□□ 0.51
PDCD4-210ENST00000492932 KDM5DQ9BY66 1539 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms