RNA–Protein interactions for RNA: ENST00000492898.1

DENND4B-211, Transcript of DENN domain containing 4B, humanhuman

TSL 5

Gene DENND4B, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-211ENST00000492898 PRXQ9BXM0 1461 aa22.13■■□□□ 1.13
DENND4B-211ENST00000492898 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.12■■□□□ 1.13
DENND4B-211ENST00000492898 IQSEC2Q5JU85 1478 aa22.12■■□□□ 1.13
DENND4B-211ENST00000492898 SAMD9Q5K651 1589 aa22.1■■□□□ 1.13
DENND4B-211ENST00000492898 UHRF1BP1Q6BDS2 1440 aa22.1■■□□□ 1.13
DENND4B-211ENST00000492898 CFAP74Q9C0B2 1584 aa22.08■■□□□ 1.12
DENND4B-211ENST00000492898 ATP10AO60312 1499 aa22.05■■□□□ 1.12
DENND4B-211ENST00000492898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.05■■□□□ 1.12
DENND4B-211ENST00000492898 HNRNPUL2Q1KMD3 747 aaKnown RBP22.05■■□□□ 1.12
DENND4B-211ENST00000492898 C9orf84Q5VXU9 1444 aa22.04■■□□□ 1.12
DENND4B-211ENST00000492898 NCOA1Q15788 1441 aa22.01■■□□□ 1.11
DENND4B-211ENST00000492898 SCAPERQ9BY12 1400 aa22.01■■□□□ 1.11
DENND4B-211ENST00000492898 SETD1BQ9UPS6 1966 aaKnown RBP21.98■■□□□ 1.11
DENND4B-211ENST00000492898 MED1Q15648 1581 aaPredicted RBP21.98■■□□□ 1.11
DENND4B-211ENST00000492898 C3P01024 1663 aa21.98■■□□□ 1.11
DENND4B-211ENST00000492898 ZNF335Q9H4Z2 1342 aaPredicted RBP21.94■■□□□ 1.1
DENND4B-211ENST00000492898 UBAP1LF5GYI3 381 aa21.93■■□□□ 1.1
DENND4B-211ENST00000492898 PLEKHD1A6NEE1 506 aa21.92■■□□□ 1.1
DENND4B-211ENST00000492898 PLCH2O75038 1416 aa21.91■■□□□ 1.1
DENND4B-211ENST00000492898 DIP2CQ9Y2E4 1556 aa21.88■■□□□ 1.09
DENND4B-211ENST00000492898 CAMSAP1Q5T5Y3 1602 aa21.88■■□□□ 1.09
DENND4B-211ENST00000492898 FAM9AQ8IZU1 332 aaPredicted RBP21.87■■□□□ 1.09
DENND4B-211ENST00000492898 TRAPPC8Q9Y2L5 1435 aa21.87■■□□□ 1.09
DENND4B-211ENST00000492898 KDM5CP41229 1560 aa21.87■■□□□ 1.09
DENND4B-211ENST00000492898 HSPA1LP34931 641 aa21.86■■□□□ 1.09
DENND4B-211ENST00000492898 CDK13Q14004 1512 aaKnown RBP21.85■■□□□ 1.09
DENND4B-211ENST00000492898 REREQ9P2R6 1566 aa21.84■■□□□ 1.09
DENND4B-211ENST00000492898 ABCA6Q8N139 1617 aa21.83■■□□□ 1.08
DENND4B-211ENST00000492898 NCKAP5LQ9HCH0 1330 aa21.82■■□□□ 1.08
DENND4B-211ENST00000492898 AFAP1Q8N556 730 aa21.82■■□□□ 1.08
DENND4B-211ENST00000492898 ZNF518AQ6AHZ1 1483 aa21.8■■□□□ 1.08
DENND4B-211ENST00000492898 AGLP35573 1532 aa21.76■■□□□ 1.07
DENND4B-211ENST00000492898 RANGAP1P46060 587 aaPredicted RBP21.74■■□□□ 1.07
DENND4B-211ENST00000492898 TCOF1Q13428 1488 aaKnown RBP21.74■■□□□ 1.07
DENND4B-211ENST00000492898 KIF14Q15058 1648 aa21.73■■□□□ 1.07
DENND4B-211ENST00000492898 MYO5CQ9NQX4 1742 aa21.73■■□□□ 1.07
DENND4B-211ENST00000492898 EFCAB2Q5VUJ9 269 aa21.73■■□□□ 1.07
DENND4B-211ENST00000492898 ALKQ9UM73 1620 aa21.72■■□□□ 1.07
DENND4B-211ENST00000492898 NPATQ14207 1427 aa21.71■■□□□ 1.07
DENND4B-211ENST00000492898 MLH3Q9UHC1 1453 aa21.71■■□□□ 1.07
DENND4B-211ENST00000492898 PLA2R1Q13018 1463 aa21.69■■□□□ 1.06
DENND4B-211ENST00000492898 PIP4K2BP78356 416 aa21.68■■□□□ 1.06
DENND4B-211ENST00000492898 ZNF142P52746 1687 aaPredicted RBP21.67■■□□□ 1.06
DENND4B-211ENST00000492898 MYO3AQ8NEV4 1616 aa21.66■■□□□ 1.06
DENND4B-211ENST00000492898 CNTLNQ9NXG0 1405 aa21.66■■□□□ 1.06
DENND4B-211ENST00000492898 SCAF1Q9H7N4 1312 aaKnown RBP21.65■■□□□ 1.06
DENND4B-211ENST00000492898 ARHGAP5Q13017 1502 aa21.65■■□□□ 1.06
DENND4B-211ENST00000492898 MROH2AA6NES4 1674 aa21.63■■□□□ 1.05
DENND4B-211ENST00000492898 ZMYM3Q14202 1370 aa21.62■■□□□ 1.05
DENND4B-211ENST00000492898 CEP170BQ9Y4F5 1589 aaPredicted RBP21.62■■□□□ 1.05
DENND4B-211ENST00000492898 KIDINS220Q9ULH0 1771 aa21.62■■□□□ 1.05
DENND4B-211ENST00000492898 PKD2Q13563 968 aa21.62■■□□□ 1.05
DENND4B-211ENST00000492898 RGS17Q9UGC6 210 aaPredicted RBP21.62■■□□□ 1.05
DENND4B-211ENST00000492898 PHF23Q9BUL5 403 aaPredicted RBP21.61■■□□□ 1.05
DENND4B-211ENST00000492898 ESF1Q9H501 851 aaKnown RBP21.6■■□□□ 1.05
DENND4B-211ENST00000492898 ABCC1P33527 1531 aa21.59■■□□□ 1.05
DENND4B-211ENST00000492898 MYT1LQ9UL68 1186 aa21.58■■□□□ 1.05
DENND4B-211ENST00000492898 PPP6R1Q9UPN7 881 aa21.58■■□□□ 1.05
DENND4B-211ENST00000492898 CDC42BPBQ9Y5S2 1711 aa21.58■■□□□ 1.04
DENND4B-211ENST00000492898 PTPRKQ15262 1439 aa21.57■■□□□ 1.04
DENND4B-211ENST00000492898 CSRNP3Q8WYN3 585 aa21.57■■□□□ 1.04
DENND4B-211ENST00000492898 NEURL4Q96JN8 1562 aa21.56■■□□□ 1.04
DENND4B-211ENST00000492898 ITSN2Q9NZM3 1697 aa21.54■■□□□ 1.04
DENND4B-211ENST00000492898 TOM1O60784 492 aa21.54■■□□□ 1.04
DENND4B-211ENST00000492898 CPS1P31327 1500 aa21.53■■□□□ 1.04
DENND4B-211ENST00000492898 TROQ12816 1431 aaPredicted RBP21.53■■□□□ 1.04
DENND4B-211ENST00000492898 CLTCQ00610 1675 aaKnown RBP21.53■■□□□ 1.04
DENND4B-211ENST00000492898 SHANK2Q9UPX8 1470 aa21.52■■□□□ 1.04
DENND4B-211ENST00000492898 SUPT6HQ7KZ85 1726 aaKnown RBP21.52■■□□□ 1.04
DENND4B-211ENST00000492898 SRCAPQ6ZRS2 3230 aa21.51■■□□□ 1.03
DENND4B-211ENST00000492898 VWDEQ8N2E2 1590 aa21.49■■□□□ 1.03
DENND4B-211ENST00000492898 DNMT1P26358 1616 aaKnown RBP21.49■■□□□ 1.03
DENND4B-211ENST00000492898 PREX2Q70Z35 1606 aa21.48■■□□□ 1.03
DENND4B-211ENST00000492898 LRRIQ1Q96JM4 1722 aa21.46■■□□□ 1.03
DENND4B-211ENST00000492898 SAMD9LQ8IVG5 1584 aa21.46■■□□□ 1.03
DENND4B-211ENST00000492898 SENP3Q9H4L4 574 aaPredicted RBP21.46■■□□□ 1.03
DENND4B-211ENST00000492898 PLXNC1O60486 1568 aa21.45■■□□□ 1.02
DENND4B-211ENST00000492898 A2ML1A8K2U0 1454 aa21.45■■□□□ 1.02
DENND4B-211ENST00000492898 POLR1AO95602 1720 aaPredicted RBP21.43■■□□□ 1.02
DENND4B-211ENST00000492898 ATP1B4Q9UN42 357 aaPredicted RBP21.4■■□□□ 1.02
DENND4B-211ENST00000492898 POTEAQ6S8J7 498 aa21.39■■□□□ 1.01
DENND4B-211ENST00000492898 STRCP1A6NGW2 1772 aa21.38■■□□□ 1.01
DENND4B-211ENST00000492898 CDK11AQ9UQ88 783 aaPredicted RBP21.37■■□□□ 1.01
DENND4B-211ENST00000492898 CLIP1P30622 1438 aa21.37■■□□□ 1.01
DENND4B-211ENST00000492898 FMN1Q68DA7 1419 aa21.36■■□□□ 1.01
DENND4B-211ENST00000492898 SYCP2Q9BX26 1530 aa21.35■■□□□ 1.01
DENND4B-211ENST00000492898 ARHGAP35Q9NRY4 1499 aa21.35■■□□□ 1.01
DENND4B-211ENST00000492898 CDC42BPAQ5VT25 1732 aa21.35■■□□□ 1.01
DENND4B-211ENST00000492898 INO80Q9ULG1 1556 aaPredicted RBP21.34■■□□□ 1.01
DENND4B-211ENST00000492898 LRRC7Q96NW7 1537 aa21.34■■□□□ 1.01
DENND4B-211ENST00000492898 SETD1AO15047 1707 aaKnown RBP21.33■■□□□ 1.01
DENND4B-211ENST00000492898 ATP7AQ04656 1500 aa21.33■■□□□ 1
DENND4B-211ENST00000492898 A2MP01023 1474 aa21.32■■□□□ 1
DENND4B-211ENST00000492898 GGT6Q6P531 493 aa21.31■■□□□ 1
DENND4B-211ENST00000492898 RNF17Q9BXT8 1623 aaKnown RBP21.3■■□□□ 1
DENND4B-211ENST00000492898 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.3■■□□□ 1
DENND4B-211ENST00000492898 MED14O60244 1454 aa21.3■■□□□ 1
DENND4B-211ENST00000492898 SPAG9O60271 1321 aaKnown RBP21.29■■□□□ 1
DENND4B-211ENST00000492898 FBXO31Q5XUX0 539 aaPredicted RBP21.29■■□□□ 1
DENND4B-211ENST00000492898 NPHP4O75161 1426 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms