RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 SCAPERQ9BY12 1400 aa30.17■■■□□ 2.42
CHD1L-209ENST00000492728 ZFYVE16Q7Z3T8 1539 aa30.16■■■□□ 2.42
CHD1L-209ENST00000492728 CLIP1P30622 1438 aa30.15■■■□□ 2.42
CHD1L-209ENST00000492728 MADDQ8WXG6 1647 aa30.14■■■□□ 2.42
CHD1L-209ENST00000492728 PTPRMP28827 1452 aa30.14■■■□□ 2.42
CHD1L-209ENST00000492728 CCDC18Q5T9S5 1454 aa30.14■■■□□ 2.42
CHD1L-209ENST00000492728 FYCO1Q9BQS8 1478 aa30.12■■■□□ 2.41
CHD1L-209ENST00000492728 ARID4BQ4LE39 1312 aaPredicted RBP30.1■■■□□ 2.41
CHD1L-209ENST00000492728 ARHGAP5Q13017 1502 aa30.1■■■□□ 2.41
CHD1L-209ENST00000492728 EFCAB2Q5VUJ9 269 aa30.09■■■□□ 2.41
CHD1L-209ENST00000492728 MAGI2Q86UL8 1455 aa30.09■■■□□ 2.41
CHD1L-209ENST00000492728 CDC42BPBQ9Y5S2 1711 aa30.06■■■□□ 2.4
CHD1L-209ENST00000492728 PREX2Q70Z35 1606 aa30.04■■■□□ 2.4
CHD1L-209ENST00000492728 RIMS1Q86UR5 1692 aaKnown RBP30.01■■■□□ 2.4
CHD1L-209ENST00000492728 KDM5CP41229 1560 aa30.01■■■□□ 2.39
CHD1L-209ENST00000492728 ZNF518AQ6AHZ1 1483 aa29.99■■■□□ 2.39
CHD1L-209ENST00000492728 ARHGEF12Q9NZN5 1544 aa29.97■■■□□ 2.39
CHD1L-209ENST00000492728 ABCC1P33527 1531 aa29.96■■■□□ 2.39
CHD1L-209ENST00000492728 AFAP1Q8N556 730 aa29.96■■■□□ 2.39
CHD1L-209ENST00000492728 CDC42BPAQ5VT25 1732 aa29.96■■■□□ 2.39
CHD1L-209ENST00000492728 ATP10AO60312 1499 aa29.94■■■□□ 2.38
CHD1L-209ENST00000492728 C9orf84Q5VXU9 1444 aa29.94■■■□□ 2.38
CHD1L-209ENST00000492728 TRAPPC8Q9Y2L5 1435 aa29.91■■■□□ 2.38
CHD1L-209ENST00000492728 ITSN2Q9NZM3 1697 aa29.91■■■□□ 2.38
CHD1L-209ENST00000492728 DIP2CQ9Y2E4 1556 aa29.9■■■□□ 2.38
CHD1L-209ENST00000492728 CEP162Q5TB80 1403 aa29.89■■■□□ 2.38
CHD1L-209ENST00000492728 MLECQ14165 292 aa29.89■■■□□ 2.38
CHD1L-209ENST00000492728 ABCA6Q8N139 1617 aa29.88■■■□□ 2.37
CHD1L-209ENST00000492728 LMTK3Q96Q04 1460 aa29.87■■■□□ 2.37
CHD1L-209ENST00000492728 FER1L4A9Z1Z3 1794 aa29.86■■■□□ 2.37
CHD1L-209ENST00000492728 GPATCH8Q9UKJ3 1502 aaKnown RBP29.86■■■□□ 2.37
CHD1L-209ENST00000492728 SAMD9LQ8IVG5 1584 aa29.86■■■□□ 2.37
CHD1L-209ENST00000492728 MLH3Q9UHC1 1453 aa29.84■■■□□ 2.37
CHD1L-209ENST00000492728 REREQ9P2R6 1566 aa29.81■■■□□ 2.36
CHD1L-209ENST00000492728 PLPPR3Q6T4P5 718 aa29.79■■■□□ 2.36
CHD1L-209ENST00000492728 SYCP2Q9BX26 1530 aa29.79■■■□□ 2.36
CHD1L-209ENST00000492728 KIDINS220Q9ULH0 1771 aa29.77■■■□□ 2.36
CHD1L-209ENST00000492728 MTUS2Q5JR59 1369 aa29.76■■■□□ 2.35
CHD1L-209ENST00000492728 MYT1LQ9UL68 1186 aa29.74■■■□□ 2.35
CHD1L-209ENST00000492728 ZNF777Q9ULD5 760 aaPredicted RBP29.74■■■□□ 2.35
CHD1L-209ENST00000492728 TIAM1Q13009 1591 aa29.73■■■□□ 2.35
CHD1L-209ENST00000492728 EHBP1L1Q8N3D4 1523 aa29.72■■■□□ 2.35
CHD1L-209ENST00000492728 ILDR1Q86SU0 546 aaPredicted RBP29.71■■■□□ 2.35
CHD1L-209ENST00000492728 CCNB3Q8WWL7 1395 aa29.71■■■□□ 2.35
CHD1L-209ENST00000492728 AGLP35573 1532 aa29.7■■■□□ 2.34
CHD1L-209ENST00000492728 LOC105371045A0A1W2PR82 267 aa29.68■■■□□ 2.34
CHD1L-209ENST00000492728 HNRNPMP52272 730 aaKnown RBP eCLIP29.67■■■□□ 2.341e-7■■□□□ 12.3
CHD1L-209ENST00000492728 KIAA1107Q9UPP5 1409 aa29.66■■■□□ 2.34
CHD1L-209ENST00000492728 HSPA2P54652 639 aa29.66■■■□□ 2.34
CHD1L-209ENST00000492728 CFDP1Q9UEE9 299 aaPredicted RBP29.66■■■□□ 2.34
CHD1L-209ENST00000492728 CEBPAP49715 358 aaPredicted RBP29.65■■■□□ 2.34
CHD1L-209ENST00000492728 INO80Q9ULG1 1556 aaPredicted RBP29.64■■■□□ 2.33
CHD1L-209ENST00000492728 PLEKHH2Q8IVE3 1493 aa29.62■■■□□ 2.33
CHD1L-209ENST00000492728 ATP7AQ04656 1500 aa29.61■■■□□ 2.33
CHD1L-209ENST00000492728 ZNF644Q9H582 1327 aaPredicted RBP29.61■■■□□ 2.33
CHD1L-209ENST00000492728 SPAG9O60271 1321 aaKnown RBP29.6■■■□□ 2.33
CHD1L-209ENST00000492728 PREX1Q8TCU6 1659 aa29.56■■■□□ 2.32
CHD1L-209ENST00000492728 MBD5Q9P267 1494 aa29.56■■■□□ 2.32
CHD1L-209ENST00000492728 VPS8Q8N3P4 1428 aa29.56■■■□□ 2.32
CHD1L-209ENST00000492728 C3P01024 1663 aa29.56■■■□□ 2.32
CHD1L-209ENST00000492728 PLXNC1O60486 1568 aa29.56■■■□□ 2.32
CHD1L-209ENST00000492728 NCOA2Q15596 1464 aa29.55■■■□□ 2.32
CHD1L-209ENST00000492728 SUPT6HQ7KZ85 1726 aaKnown RBP29.52■■■□□ 2.32
CHD1L-209ENST00000492728 A2MP01023 1474 aa29.49■■■□□ 2.31
CHD1L-209ENST00000492728 CAMSAP2Q08AD1 1489 aa29.46■■■□□ 2.31
CHD1L-209ENST00000492728 LRRC9Q6ZRR7 1453 aa29.45■■■□□ 2.31
CHD1L-209ENST00000492728 UHRF1BP1Q6BDS2 1440 aa29.44■■■□□ 2.3
CHD1L-209ENST00000492728 CNTLNQ9NXG0 1405 aa29.44■■■□□ 2.3
CHD1L-209ENST00000492728 ADGBQ8N7X0 1667 aa29.42■■■□□ 2.3
CHD1L-209ENST00000492728 MROH2AA6NES4 1674 aa29.41■■■□□ 2.3
CHD1L-209ENST00000492728 ESF1Q9H501 851 aaKnown RBP29.39■■■□□ 2.3
CHD1L-209ENST00000492728 CCDC141Q6ZP82 1450 aa29.39■■■□□ 2.3
CHD1L-209ENST00000492728 RTEL1-TNFRSF6BF6WH68 1400 aa29.38■■■□□ 2.29
CHD1L-209ENST00000492728 STRCQ7RTU9 1775 aa29.38■■■□□ 2.29
CHD1L-209ENST00000492728 CLTCQ00610 1675 aaKnown RBP29.37■■■□□ 2.29
CHD1L-209ENST00000492728 KANK4Q5T7N3 995 aaPredicted RBP29.37■■■□□ 2.29
CHD1L-209ENST00000492728 SETD1BQ9UPS6 1966 aaKnown RBP29.36■■■□□ 2.29
CHD1L-209ENST00000492728 MAP3K1Q13233 1512 aa29.35■■■□□ 2.29
CHD1L-209ENST00000492728 ZMYM3Q14202 1370 aa29.34■■■□□ 2.29
CHD1L-209ENST00000492728 ARHGEF5Q12774 1597 aa29.31■■■□□ 2.28
CHD1L-209ENST00000492728 FBXO41Q8TF61 875 aa29.31■■■□□ 2.28
CHD1L-209ENST00000492728 NPATQ14207 1427 aa29.3■■■□□ 2.28
CHD1L-209ENST00000492728 DHX29Q7Z478 1369 aaKnown RBP29.3■■■□□ 2.28
CHD1L-209ENST00000492728 GGT6Q6P531 493 aa29.3■■■□□ 2.28
CHD1L-209ENST00000492728 PTPRKQ15262 1439 aa29.25■■■□□ 2.27
CHD1L-209ENST00000492728 MYO3AQ8NEV4 1616 aa29.23■■■□□ 2.27
CHD1L-209ENST00000492728 MYOM3Q5VTT5 1437 aa29.22■■■□□ 2.27
CHD1L-209ENST00000492728 NCOA1Q15788 1441 aa29.21■■■□□ 2.27
CHD1L-209ENST00000492728 RSPH4AQ5TD94 716 aa29.21■■■□□ 2.27
CHD1L-209ENST00000492728 ZNF142P52746 1687 aaPredicted RBP29.18■■■□□ 2.26
CHD1L-209ENST00000492728 MAST1Q9Y2H9 1570 aa29.18■■■□□ 2.26
CHD1L-209ENST00000492728 MIA2Q96PC5 1412 aa29.18■■■□□ 2.26
CHD1L-209ENST00000492728 CAMSAP1Q5T5Y3 1602 aa29.17■■■□□ 2.26
CHD1L-209ENST00000492728 KIF3BO15066 747 aa29.17■■■□□ 2.26
CHD1L-209ENST00000492728 PPP6R1Q9UPN7 881 aa29.17■■■□□ 2.26
CHD1L-209ENST00000492728 PTPRTO14522 1441 aa29.15■■■□□ 2.26
CHD1L-209ENST00000492728 CERKQ8TCT0 537 aa29.15■■■□□ 2.26
CHD1L-209ENST00000492728 KDM5DQ9BY66 1539 aa29.15■■■□□ 2.26
CHD1L-209ENST00000492728 CEP170BQ9Y4F5 1589 aaPredicted RBP29.14■■■□□ 2.26
CHD1L-209ENST00000492728 TSPY4P0CV99 314 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms