RNA–Protein interactions for RNA: ENST00000492519.1

PABPC4-217, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-217ENST00000492519 TMEM121BQ9BXQ6 578 aaPredicted RBP7.41□□□□□ -1.22
PABPC4-217ENST00000492519 NCKAP5LQ9HCH0 1330 aa7.4□□□□□ -1.22
PABPC4-217ENST00000492519 E2F4Q16254 413 aa7.38□□□□□ -1.23
PABPC4-217ENST00000492519 MICALL2Q8IY33 904 aa7.38□□□□□ -1.23
PABPC4-217ENST00000492519 BOLA1Q9Y3E2 137 aa7.38□□□□□ -1.23
PABPC4-217ENST00000492519 L3MBTL3Q96JM7 780 aaPredicted RBP7.37□□□□□ -1.23
PABPC4-217ENST00000492519 LARP6Q9BRS8 491 aaKnown RBP7.37□□□□□ -1.23
PABPC4-217ENST00000492519 PDE4AP27815 886 aa7.36□□□□□ -1.23
PABPC4-217ENST00000492519 ARHGEF1Q92888 912 aaKnown RBP7.36□□□□□ -1.23
PABPC4-217ENST00000492519 MFSD10Q14728 455 aa7.35□□□□□ -1.23
PABPC4-217ENST00000492519 CRISPLD2Q9H0B8 497 aa7.35□□□□□ -1.23
PABPC4-217ENST00000492519 LMOD2Q6P5Q4 547 aa7.33□□□□□ -1.24
PABPC4-217ENST00000492519 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.33□□□□□ -1.24
PABPC4-217ENST00000492519 TMEM92Q6UXU6 159 aa7.32□□□□□ -1.24
PABPC4-217ENST00000492519 DDX27Q96GQ7 796 aaKnown RBP7.32□□□□□ -1.24
PABPC4-217ENST00000492519 SEMA3EO15041 775 aa7.31□□□□□ -1.24
PABPC4-217ENST00000492519 LHX8Q68G74 356 aa7.31□□□□□ -1.24
PABPC4-217ENST00000492519 KIF3CO14782 793 aa7.29□□□□□ -1.24
PABPC4-217ENST00000492519 OTUD5Q96G74 571 aa7.29□□□□□ -1.24
PABPC4-217ENST00000492519 TESPA1A2RU30 521 aaPredicted RBP7.28□□□□□ -1.24
PABPC4-217ENST00000492519 G3V3G9 751 aa7.28□□□□□ -1.24
PABPC4-217ENST00000492519 CAMK2BQ13554 666 aa7.28□□□□□ -1.24
PABPC4-217ENST00000492519 TULP1O00294 542 aaPredicted RBP7.27□□□□□ -1.25
PABPC4-217ENST00000492519 GPHNQ9NQX3 736 aaPredicted RBP7.27□□□□□ -1.25
PABPC4-217ENST00000492519 PPP1R15BQ5SWA1 713 aa7.26□□□□□ -1.25
PABPC4-217ENST00000492519 MAMSTRQ6ZN01 415 aa7.26□□□□□ -1.25
PABPC4-217ENST00000492519 C3orf67Q6ZVT6 689 aa7.26□□□□□ -1.25
PABPC4-217ENST00000492519 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.26□□□□□ -1.25
PABPC4-217ENST00000492519 C2orf72A6NCS6 295 aa7.25□□□□□ -1.25
PABPC4-217ENST00000492519 ARIH1Q9Y4X5 557 aaPredicted RBP7.25□□□□□ -1.25
PABPC4-217ENST00000492519 SCUBE2Q9NQ36 999 aa7.24□□□□□ -1.25
PABPC4-217ENST00000492519 DSG2Q14126 1118 aa7.23□□□□□ -1.25
PABPC4-217ENST00000492519 ZC3H15Q8WU90 426 aaKnown RBP7.23□□□□□ -1.25
PABPC4-217ENST00000492519 FOXK1P85037 733 aa7.21□□□□□ -1.26
PABPC4-217ENST00000492519 SLAIN1Q8ND83 568 aa7.21□□□□□ -1.26
PABPC4-217ENST00000492519 TMC2Q8TDI7 906 aa7.21□□□□□ -1.26
PABPC4-217ENST00000492519 EMILIN3Q9NT22 766 aa7.21□□□□□ -1.26
PABPC4-217ENST00000492519 SMYD5Q6GMV2 418 aa7.2□□□□□ -1.26
PABPC4-217ENST00000492519 DPYSL4O14531 572 aa7.19□□□□□ -1.26
PABPC4-217ENST00000492519 MLLT3P42568 568 aaPredicted RBP7.19□□□□□ -1.26
PABPC4-217ENST00000492519 PLPP6Q8IY26 295 aa7.17□□□□□ -1.26
PABPC4-217ENST00000492519 HOXB3P14651 431 aaPredicted RBP7.16□□□□□ -1.26
PABPC4-217ENST00000492519 SLC24A3Q9HC58 644 aa7.16□□□□□ -1.26
PABPC4-217ENST00000492519 RBM26Q5T8P6 1007 aaKnown RBP7.15□□□□□ -1.26
PABPC4-217ENST00000492519 ZMYND10O75800 440 aa7.14□□□□□ -1.27
PABPC4-217ENST00000492519 PDIA6Q15084 440 aa7.14□□□□□ -1.27
PABPC4-217ENST00000492519 SPDYE16A6NNV3 312 aaPredicted RBP7.13□□□□□ -1.27
PABPC4-217ENST00000492519 SLC34A2O95436 690 aa7.12□□□□□ -1.27
PABPC4-217ENST00000492519 BRPF1P55201 1214 aaPredicted RBP7.12□□□□□ -1.27
PABPC4-217ENST00000492519 GPIHBP1Q8IV16 184 aa7.11□□□□□ -1.27
PABPC4-217ENST00000492519 OXER1Q8TDS5 423 aa7.11□□□□□ -1.27
PABPC4-217ENST00000492519 MAP3K9P80192 1104 aa7.1□□□□□ -1.27
PABPC4-217ENST00000492519 TMEM132AQ24JP5 1023 aa7.1□□□□□ -1.27
PABPC4-217ENST00000492519 BARGINQ6ZT62 677 aa7.1□□□□□ -1.27
PABPC4-217ENST00000492519 PTCD2Q8WV60 388 aaKnown RBP7.1□□□□□ -1.27
PABPC4-217ENST00000492519 UPF1Q92900 1129 aaKnown RBP eCLIP7.1□□□□□ -1.27
PABPC4-217ENST00000492519 NEUROD2Q15784 382 aa7.08□□□□□ -1.28
PABPC4-217ENST00000492519 DOK7Q18PE1 504 aa7.08□□□□□ -1.28
PABPC4-217ENST00000492519 KDM4FA0A1W2PPD8 638 aa7.07□□□□□ -1.28
PABPC4-217ENST00000492519 GRXCR2A6NFK2 248 aa7.07□□□□□ -1.28
PABPC4-217ENST00000492519 SNPHO15079 494 aa7.07□□□□□ -1.28
PABPC4-217ENST00000492519 GPR153Q6NV75 609 aa7.07□□□□□ -1.28
PABPC4-217ENST00000492519 PCDHGA4Q9Y5G9 962 aa7.07□□□□□ -1.28
PABPC4-217ENST00000492519 GTF3C3Q9Y5Q9 886 aa7.07□□□□□ -1.28
PABPC4-217ENST00000492519 LCE2DQ5TA82 110 aaPredicted RBP7.06□□□□□ -1.28
PABPC4-217ENST00000492519 KRI1Q8N9T8 703 aaKnown RBP7.05□□□□□ -1.28
PABPC4-217ENST00000492519 ZSWIM6Q9HCJ5 1215 aa7.05□□□□□ -1.28
PABPC4-217ENST00000492519 ARSIQ5FYB1 569 aa7.04□□□□□ -1.28
PABPC4-217ENST00000492519 KHSRPQ92945 711 aaKnown RBP eCLIP7.04□□□□□ -1.28
PABPC4-217ENST00000492519 GPR37O15354 613 aa7.03□□□□□ -1.28
PABPC4-217ENST00000492519 ST18O60284 1047 aa7.03□□□□□ -1.28
PABPC4-217ENST00000492519 HOXB1P14653 301 aaPredicted RBP7.03□□□□□ -1.28
PABPC4-217ENST00000492519 OSBPP22059 807 aa7.03□□□□□ -1.28
PABPC4-217ENST00000492519 AK7Q96M32 723 aa7.03□□□□□ -1.28
PABPC4-217ENST00000492519 EVI5O60447 810 aa7.02□□□□□ -1.29
PABPC4-217ENST00000492519 PTGER2P43116 358 aa7.02□□□□□ -1.29
PABPC4-217ENST00000492519 ZNF710Q8N1W2 664 aa7.02□□□□□ -1.29
PABPC4-217ENST00000492519 DDX12PQ92771 950 aa7.02□□□□□ -1.29
PABPC4-217ENST00000492519 NUTM2FA1L443 756 aa7.01□□□□□ -1.29
PABPC4-217ENST00000492519 RIMBP2O15034 1052 aa7.01□□□□□ -1.29
PABPC4-217ENST00000492519 TBC1D12O60347 775 aa7.01□□□□□ -1.29
PABPC4-217ENST00000492519 FAM163AQ96GL9 167 aaPredicted RBP7.01□□□□□ -1.29
PABPC4-217ENST00000492519 ANO8Q9HCE9 1232 aaPredicted RBP7.01□□□□□ -1.29
PABPC4-217ENST00000492519 NUDT7P0C024 238 aa7□□□□□ -1.29
PABPC4-217ENST00000492519 TIMELESSQ9UNS1 1208 aa7□□□□□ -1.29
PABPC4-217ENST00000492519 PRIM1P49642 420 aaKnown RBP6.99□□□□□ -1.29
PABPC4-217ENST00000492519 GPBP1L1Q9HC44 474 aaPredicted RBP6.99□□□□□ -1.29
PABPC4-217ENST00000492519 TRIM66O15016 1216 aa6.98□□□□□ -1.29
PABPC4-217ENST00000492519 ZNF316A6NFI3 1004 aaPredicted RBP6.95□□□□□ -1.3
PABPC4-217ENST00000492519 FECHP22830 423 aa6.95□□□□□ -1.3
PABPC4-217ENST00000492519 PDE4DQ08499 809 aa6.95□□□□□ -1.3
PABPC4-217ENST00000492519 MARVELD3Q96A59 401 aa6.95□□□□□ -1.3
PABPC4-217ENST00000492519 LHX6Q9UPM6 363 aa6.95□□□□□ -1.3
PABPC4-217ENST00000492519 MINK1Q8N4C8 1332 aaPredicted RBP6.95□□□□□ -1.3
PABPC4-217ENST00000492519 GNPATO15228 680 aa6.94□□□□□ -1.3
PABPC4-217ENST00000492519 FCHSD2O94868 740 aa6.94□□□□□ -1.3
PABPC4-217ENST00000492519 MAP2K5Q13163 448 aa6.94□□□□□ -1.3
PABPC4-217ENST00000492519 CCDC102AQ96A19 550 aa6.94□□□□□ -1.3
PABPC4-217ENST00000492519 KDM4CQ9H3R0 1056 aa6.94□□□□□ -1.3
PABPC4-217ENST00000492519 POTEB3A0JP26 581 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms