RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 CCDC18Q5T9S5 1454 aa19.06■□□□□ 0.64
MDC1-207ENST00000492462 LOC105371045A0A1W2PR82 267 aa19.06■□□□□ 0.64
MDC1-207ENST00000492462 DENND4BO75064 1496 aaPredicted RBP19.05■□□□□ 0.64
MDC1-207ENST00000492462 CEP162Q5TB80 1403 aa19.05■□□□□ 0.64
MDC1-207ENST00000492462 SCAPERQ9BY12 1400 aa19■□□□□ 0.63
MDC1-207ENST00000492462 CDC42BPBQ9Y5S2 1711 aa18.99■□□□□ 0.63
MDC1-207ENST00000492462 EFCAB2Q5VUJ9 269 aa18.98■□□□□ 0.63
MDC1-207ENST00000492462 ARHGAP5Q13017 1502 aa18.98■□□□□ 0.63
MDC1-207ENST00000492462 CERKQ8TCT0 537 aa18.97■□□□□ 0.63
MDC1-207ENST00000492462 ZMYM4Q5VZL5 1548 aa18.96■□□□□ 0.63
MDC1-207ENST00000492462 ARHGEF40Q8TER5 1519 aa18.96■□□□□ 0.63
MDC1-207ENST00000492462 SPATA31D1Q6ZQQ2 1576 aa18.96■□□□□ 0.63
MDC1-207ENST00000492462 POGZQ7Z3K3 1410 aa18.95■□□□□ 0.62
MDC1-207ENST00000492462 YEATS2Q9ULM3 1422 aa18.95■□□□□ 0.62
MDC1-207ENST00000492462 PREX2Q70Z35 1606 aa18.95■□□□□ 0.62
MDC1-207ENST00000492462 CDC42BPAQ5VT25 1732 aa18.94■□□□□ 0.62
MDC1-207ENST00000492462 PTPRMP28827 1452 aa18.92■□□□□ 0.62
MDC1-207ENST00000492462 SIGLEC1Q9BZZ2 1709 aa18.92■□□□□ 0.62
MDC1-207ENST00000492462 ZFYVE16Q7Z3T8 1539 aa18.92■□□□□ 0.62
MDC1-207ENST00000492462 ADAMTSL3P82987 1691 aa18.91■□□□□ 0.62
MDC1-207ENST00000492462 BCORL1Q5H9F3 1711 aa18.89■□□□□ 0.61
MDC1-207ENST00000492462 ARID4BQ4LE39 1312 aaPredicted RBP18.89■□□□□ 0.61
MDC1-207ENST00000492462 ARHGEF12Q9NZN5 1544 aa18.89■□□□□ 0.61
MDC1-207ENST00000492462 AFAP1Q8N556 730 aa18.88■□□□□ 0.61
MDC1-207ENST00000492462 ABCC1P33527 1531 aa18.87■□□□□ 0.61
MDC1-207ENST00000492462 MTUS2Q5JR59 1369 aa18.87■□□□□ 0.61
MDC1-207ENST00000492462 MAGI2Q86UL8 1455 aa18.87■□□□□ 0.61
MDC1-207ENST00000492462 GPATCH8Q9UKJ3 1502 aaKnown RBP18.87■□□□□ 0.61
MDC1-207ENST00000492462 ITSN2Q9NZM3 1697 aa18.85■□□□□ 0.61
MDC1-207ENST00000492462 KDM5CP41229 1560 aa18.85■□□□□ 0.61
MDC1-207ENST00000492462 ZNF518AQ6AHZ1 1483 aa18.85■□□□□ 0.61
MDC1-207ENST00000492462 TRAPPC8Q9Y2L5 1435 aa18.85■□□□□ 0.61
MDC1-207ENST00000492462 MADDQ8WXG6 1647 aa18.85■□□□□ 0.61
MDC1-207ENST00000492462 SAMD9LQ8IVG5 1584 aa18.84■□□□□ 0.61
MDC1-207ENST00000492462 ZNF777Q9ULD5 760 aaPredicted RBP18.83■□□□□ 0.6
MDC1-207ENST00000492462 EHBP1L1Q8N3D4 1523 aa18.83■□□□□ 0.6
MDC1-207ENST00000492462 VPS8Q8N3P4 1428 aa18.82■□□□□ 0.6
MDC1-207ENST00000492462 ATP10AO60312 1499 aa18.81■□□□□ 0.6
MDC1-207ENST00000492462 CCNB3Q8WWL7 1395 aa18.81■□□□□ 0.6
MDC1-207ENST00000492462 TIAM1Q13009 1591 aa18.8■□□□□ 0.6
MDC1-207ENST00000492462 SYCP2Q9BX26 1530 aa18.79■□□□□ 0.6
MDC1-207ENST00000492462 RIMS1Q86UR5 1692 aaKnown RBP18.79■□□□□ 0.6
MDC1-207ENST00000492462 ABCA6Q8N139 1617 aa18.78■□□□□ 0.6
MDC1-207ENST00000492462 DIP2CQ9Y2E4 1556 aa18.78■□□□□ 0.6
MDC1-207ENST00000492462 C9orf84Q5VXU9 1444 aa18.78■□□□□ 0.6
MDC1-207ENST00000492462 MLECQ14165 292 aa18.78■□□□□ 0.6
MDC1-207ENST00000492462 CFDP1Q9UEE9 299 aaPredicted RBP18.78■□□□□ 0.6
MDC1-207ENST00000492462 HSPA2P54652 639 aa18.77■□□□□ 0.6
MDC1-207ENST00000492462 MYT1LQ9UL68 1186 aa18.77■□□□□ 0.6
MDC1-207ENST00000492462 MLH3Q9UHC1 1453 aa18.77■□□□□ 0.59
MDC1-207ENST00000492462 KIDINS220Q9ULH0 1771 aa18.76■□□□□ 0.59
MDC1-207ENST00000492462 HNRNPMP52272 730 aaKnown RBP eCLIP18.76■□□□□ 0.59
MDC1-207ENST00000492462 ZNF644Q9H582 1327 aaPredicted RBP18.74■□□□□ 0.59
MDC1-207ENST00000492462 NCOA2Q15596 1464 aa18.74■□□□□ 0.59
MDC1-207ENST00000492462 SUPT6HQ7KZ85 1726 aaKnown RBP18.73■□□□□ 0.59
MDC1-207ENST00000492462 FER1L4A9Z1Z3 1794 aa18.72■□□□□ 0.59
MDC1-207ENST00000492462 KIAA1107Q9UPP5 1409 aa18.71■□□□□ 0.59
MDC1-207ENST00000492462 LRRC9Q6ZRR7 1453 aa18.71■□□□□ 0.59
MDC1-207ENST00000492462 KANK4Q5T7N3 995 aaPredicted RBP18.7■□□□□ 0.58
MDC1-207ENST00000492462 PLPPR3Q6T4P5 718 aa18.7■□□□□ 0.58
MDC1-207ENST00000492462 REREQ9P2R6 1566 aa18.7■□□□□ 0.58
MDC1-207ENST00000492462 PLEKHH2Q8IVE3 1493 aa18.7■□□□□ 0.58
MDC1-207ENST00000492462 SPAG9O60271 1321 aaKnown RBP18.68■□□□□ 0.58
MDC1-207ENST00000492462 INO80Q9ULG1 1556 aaPredicted RBP18.67■□□□□ 0.58
MDC1-207ENST00000492462 MBD5Q9P267 1494 aa18.66■□□□□ 0.58
MDC1-207ENST00000492462 ATP7AQ04656 1500 aa18.66■□□□□ 0.58
MDC1-207ENST00000492462 MAP3K1Q13233 1512 aa18.66■□□□□ 0.58
MDC1-207ENST00000492462 AGLP35573 1532 aa18.64■□□□□ 0.58
MDC1-207ENST00000492462 CAMSAP2Q08AD1 1489 aa18.63■□□□□ 0.57
MDC1-207ENST00000492462 CEBPAP49715 358 aaPredicted RBP18.61■□□□□ 0.57
MDC1-207ENST00000492462 PLXNC1O60486 1568 aa18.58■□□□□ 0.56
MDC1-207ENST00000492462 A2MP01023 1474 aa18.58■□□□□ 0.56
MDC1-207ENST00000492462 CCDC141Q6ZP82 1450 aa18.57■□□□□ 0.56
MDC1-207ENST00000492462 ADGBQ8N7X0 1667 aa18.55■□□□□ 0.56
MDC1-207ENST00000492462 C3P01024 1663 aa18.54■□□□□ 0.56
MDC1-207ENST00000492462 RTEL1-TNFRSF6BF6WH68 1400 aa18.54■□□□□ 0.56
MDC1-207ENST00000492462 MYOM3Q5VTT5 1437 aa18.54■□□□□ 0.56
MDC1-207ENST00000492462 ARHGEF5Q12774 1597 aa18.54■□□□□ 0.56
MDC1-207ENST00000492462 APLP2Q06481 763 aa18.53■□□□□ 0.56
MDC1-207ENST00000492462 ESF1Q9H501 851 aaKnown RBP18.5■□□□□ 0.55
MDC1-207ENST00000492462 MIA2Q96PC5 1412 aa18.49■□□□□ 0.55
MDC1-207ENST00000492462 PREX1Q8TCU6 1659 aa18.49■□□□□ 0.55
MDC1-207ENST00000492462 CLTCQ00610 1675 aaKnown RBP18.48■□□□□ 0.55
MDC1-207ENST00000492462 DHX29Q7Z478 1369 aaKnown RBP18.48■□□□□ 0.55
MDC1-207ENST00000492462 RSPH4AQ5TD94 716 aa18.48■□□□□ 0.55
MDC1-207ENST00000492462 GGT6Q6P531 493 aa18.48■□□□□ 0.55
MDC1-207ENST00000492462 SETD1BQ9UPS6 1966 aaKnown RBP18.47■□□□□ 0.55
MDC1-207ENST00000492462 CNTLNQ9NXG0 1405 aa18.47■□□□□ 0.55
MDC1-207ENST00000492462 MROH2AA6NES4 1674 aa18.46■□□□□ 0.55
MDC1-207ENST00000492462 TSPY4P0CV99 314 aa18.45■□□□□ 0.54
MDC1-207ENST00000492462 TSPY10P0CW01 314 aa18.45■□□□□ 0.54
MDC1-207ENST00000492462 DMRT2Q9Y5R5 561 aa18.45■□□□□ 0.54
MDC1-207ENST00000492462 PTPN23Q9H3S7 1636 aa18.45■□□□□ 0.54
MDC1-207ENST00000492462 MAST1Q9Y2H9 1570 aa18.44■□□□□ 0.54
MDC1-207ENST00000492462 ZMYM3Q14202 1370 aa18.43■□□□□ 0.54
MDC1-207ENST00000492462 KIF3BO15066 747 aa18.42■□□□□ 0.54
MDC1-207ENST00000492462 UHRF1BP1Q6BDS2 1440 aa18.41■□□□□ 0.54
MDC1-207ENST00000492462 FGD6Q6ZV73 1430 aa18.41■□□□□ 0.54
MDC1-207ENST00000492462 STRCQ7RTU9 1775 aa18.4■□□□□ 0.54
MDC1-207ENST00000492462 ABCC5O15440 1437 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms