RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 VIRMAQ69YN4 1812 aaKnown RBP12.76□□□□□ -0.37
VPS8-225ENST00000492449 RRP1P56182 461 aaKnown RBP12.76□□□□□ -0.37
VPS8-225ENST00000492449 NAP1L5Q96NT1 182 aaPredicted RBP12.76□□□□□ -0.37
VPS8-225ENST00000492449 EIF4G2P78344 907 aaKnown RBP eCLIP12.76□□□□□ -0.37
VPS8-225ENST00000492449 FGD1P98174 961 aa12.75□□□□□ -0.37
VPS8-225ENST00000492449 RBM10P98175 930 aaKnown RBP12.75□□□□□ -0.37
VPS8-225ENST00000492449 HFM1A2PYH4 1435 aa12.75□□□□□ -0.37
VPS8-225ENST00000492449 PRDM4Q9UKN5 801 aa12.74□□□□□ -0.37
VPS8-225ENST00000492449 HECW1Q76N89 1606 aa12.73□□□□□ -0.37
VPS8-225ENST00000492449 EXOC6Q8TAG9 804 aa12.72□□□□□ -0.37
VPS8-225ENST00000492449 PDCL3Q9H2J4 239 aa12.72□□□□□ -0.37
VPS8-225ENST00000492449 DHX29Q7Z478 1369 aaKnown RBP12.69□□□□□ -0.38
VPS8-225ENST00000492449 TPM2P07951 284 aa12.69□□□□□ -0.38
VPS8-225ENST00000492449 SPATA31E1Q6ZUB1 1445 aa12.69□□□□□ -0.38
VPS8-225ENST00000492449 FAM50AQ14320 339 aaKnown RBP12.69□□□□□ -0.38
VPS8-225ENST00000492449 LRPPRCP42704 1394 aaKnown RBP12.68□□□□□ -0.38
VPS8-225ENST00000492449 SLC4A3P48751 1232 aa12.67□□□□□ -0.38
VPS8-225ENST00000492449 FSD2A1L4K1 749 aa12.67□□□□□ -0.38
VPS8-225ENST00000492449 MYOM3Q5VTT5 1437 aa12.67□□□□□ -0.38
VPS8-225ENST00000492449 POGKQ9P215 609 aa12.66□□□□□ -0.38
VPS8-225ENST00000492449 ATAD2BQ9ULI0 1458 aa12.66□□□□□ -0.38
VPS8-225ENST00000492449 PCF11O94913 1555 aaKnown RBP12.66□□□□□ -0.38
VPS8-225ENST00000492449 GCC2Q8IWJ2 1684 aa12.65□□□□□ -0.38
VPS8-225ENST00000492449 PNISRQ8TF01 805 aaKnown RBP12.64□□□□□ -0.39
VPS8-225ENST00000492449 NAIPQ13075 1403 aa12.64□□□□□ -0.39
VPS8-225ENST00000492449 AQRO60306 1485 aaKnown RBP eCLIP12.64□□□□□ -0.39
VPS8-225ENST00000492449 KIF7Q2M1P5 1343 aa12.64□□□□□ -0.39
VPS8-225ENST00000492449 FAM161AQ3B820 660 aa12.64□□□□□ -0.39
VPS8-225ENST00000492449 RCAN3Q9UKA8 241 aa12.64□□□□□ -0.39
VPS8-225ENST00000492449 KTN1Q86UP2 1357 aaKnown RBP12.63□□□□□ -0.39
VPS8-225ENST00000492449 FMN1Q68DA7 1419 aa12.63□□□□□ -0.39
VPS8-225ENST00000492449 XRCC6P12956 609 aaKnown RBP eCLIP12.63□□□□□ -0.39
VPS8-225ENST00000492449 C8orf34Q49A92 452 aa12.63□□□□□ -0.39
VPS8-225ENST00000492449 KDM2BQ8NHM5 1336 aa12.63□□□□□ -0.39
VPS8-225ENST00000492449 KIF27Q86VH2 1401 aa12.63□□□□□ -0.39
VPS8-225ENST00000492449 DENND4BO75064 1496 aaPredicted RBP12.63□□□□□ -0.39
VPS8-225ENST00000492449 FGD6Q6ZV73 1430 aa12.62□□□□□ -0.39
VPS8-225ENST00000492449 A0A0U1RQG5 324 aaPredicted RBP12.62□□□□□ -0.39
VPS8-225ENST00000492449 PDE4CQ08493 712 aa12.62□□□□□ -0.39
VPS8-225ENST00000492449 MIA2Q96PC5 1412 aa12.62□□□□□ -0.39
VPS8-225ENST00000492449 PDE3BQ13370 1112 aa12.61□□□□□ -0.39
VPS8-225ENST00000492449 CUX1P39880 1505 aa12.6□□□□□ -0.39
VPS8-225ENST00000492449 FYCO1Q9BQS8 1478 aa12.6□□□□□ -0.39
VPS8-225ENST00000492449 PTPRKQ15262 1439 aa12.6□□□□□ -0.39
VPS8-225ENST00000492449 GOLGA6L3A6NEY3 463 aa12.59□□□□□ -0.39
VPS8-225ENST00000492449 ARID4BQ4LE39 1312 aaPredicted RBP12.57□□□□□ -0.4
VPS8-225ENST00000492449 ZMYM4Q5VZL5 1548 aa12.57□□□□□ -0.4
VPS8-225ENST00000492449 ESPNB1AK53 854 aa12.57□□□□□ -0.4
VPS8-225ENST00000492449 TERF1P54274 439 aa12.57□□□□□ -0.4
VPS8-225ENST00000492449 CENPQQ7L2Z9 268 aaPredicted RBP12.57□□□□□ -0.4
VPS8-225ENST00000492449 MAP7D2Q96T17 732 aa12.57□□□□□ -0.4
VPS8-225ENST00000492449 BCORL1Q5H9F3 1711 aa12.56□□□□□ -0.4
VPS8-225ENST00000492449 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
VPS8-225ENST00000492449 ISY1Q9ULR0 285 aaKnown RBP12.56□□□□□ -0.4
VPS8-225ENST00000492449 TEX14Q8IWB6 1497 aa12.56□□□□□ -0.4
VPS8-225ENST00000492449 INSRP06213 1382 aa12.56□□□□□ -0.4
VPS8-225ENST00000492449 MRE11P49959 708 aa12.55□□□□□ -0.4
VPS8-225ENST00000492449 SMAP1Q8IYB5 467 aaPredicted RBP12.55□□□□□ -0.4
VPS8-225ENST00000492449 ANTXR1Q9H6X2 564 aa12.54□□□□□ -0.4
VPS8-225ENST00000492449 RGS3P49796 1198 aa12.54□□□□□ -0.4
VPS8-225ENST00000492449 E9PCH4 1651 aa12.53□□□□□ -0.4
VPS8-225ENST00000492449 RPRD2Q5VT52 1461 aaKnown RBP12.53□□□□□ -0.4
VPS8-225ENST00000492449 PANK2Q9BZ23 570 aa12.52□□□□□ -0.4
VPS8-225ENST00000492449 ERBB4Q15303 1308 aa12.52□□□□□ -0.41
VPS8-225ENST00000492449 CASKIN1Q8WXD9 1431 aa12.52□□□□□ -0.41
VPS8-225ENST00000492449 ROCK2O75116 1388 aaKnown RBP12.51□□□□□ -0.41
VPS8-225ENST00000492449 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
VPS8-225ENST00000492449 USP19O94966 1318 aa12.51□□□□□ -0.41
VPS8-225ENST00000492449 BECN1Q14457 450 aa12.51□□□□□ -0.41
VPS8-225ENST00000492449 CRBNQ96SW2 442 aa12.51□□□□□ -0.41
VPS8-225ENST00000492449 CTTNBP2Q8WZ74 1663 aa12.51□□□□□ -0.41
VPS8-225ENST00000492449 SKAP1Q86WV1 359 aa12.51□□□□□ -0.41
VPS8-225ENST00000492449 L3MBTL2Q969R5 705 aa12.51□□□□□ -0.41
VPS8-225ENST00000492449 PLEKHH2Q8IVE3 1493 aa12.5□□□□□ -0.41
VPS8-225ENST00000492449 NLRP1Q9C000 1473 aa12.5□□□□□ -0.41
VPS8-225ENST00000492449 TMC1Q8TDI8 760 aa12.5□□□□□ -0.41
VPS8-225ENST00000492449 THOC2Q8NI27 1593 aaKnown RBP12.5□□□□□ -0.41
VPS8-225ENST00000492449 EFCAB5A4FU69 1503 aa12.49□□□□□ -0.41
VPS8-225ENST00000492449 KDM5CP41229 1560 aa12.49□□□□□ -0.41
VPS8-225ENST00000492449 PDIA4P13667 645 aaKnown RBP12.49□□□□□ -0.41
VPS8-225ENST00000492449 UTP14CQ5TAP6 766 aaKnown RBP12.49□□□□□ -0.41
VPS8-225ENST00000492449 MYH16Q9H6N6 1097 aa12.48□□□□□ -0.41
VPS8-225ENST00000492449 KIF15Q9NS87 1388 aa12.48□□□□□ -0.41
VPS8-225ENST00000492449 CCDC144AA2RUR9 1427 aa12.48□□□□□ -0.41
VPS8-225ENST00000492449 FGD5Q6ZNL6 1462 aa12.47□□□□□ -0.41
VPS8-225ENST00000492449 KIF14Q15058 1648 aa12.47□□□□□ -0.41
VPS8-225ENST00000492449 NBPF8Q3BBV2 869 aa12.47□□□□□ -0.41
VPS8-225ENST00000492449 MTERF4Q7Z6M4 381 aaKnown RBP12.47□□□□□ -0.41
VPS8-225ENST00000492449 MYBBP1AQ9BQG0 1328 aaKnown RBP12.47□□□□□ -0.41
VPS8-225ENST00000492449 KIAA1211Q6ZU35 1233 aa12.46□□□□□ -0.41
VPS8-225ENST00000492449 MBD5Q9P267 1494 aa12.46□□□□□ -0.41
VPS8-225ENST00000492449 GRPEL1Q9HAV7 217 aa12.46□□□□□ -0.42
VPS8-225ENST00000492449 BLMP54132 1417 aaPredicted RBP12.45□□□□□ -0.42
VPS8-225ENST00000492449 RIPK4P57078 832 aa12.45□□□□□ -0.42
VPS8-225ENST00000492449 SUPT6HQ7KZ85 1726 aaKnown RBP12.45□□□□□ -0.42
VPS8-225ENST00000492449 OFD1O75665 1012 aa12.45□□□□□ -0.42
VPS8-225ENST00000492449 MCM4P33991 863 aa12.45□□□□□ -0.42
VPS8-225ENST00000492449 RALBP1Q15311 655 aa12.45□□□□□ -0.42
VPS8-225ENST00000492449 KDM6BO15054 1643 aa12.45□□□□□ -0.42
VPS8-225ENST00000492449 TCOF1Q13428 1488 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms