RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 AEBP2Q6ZN18 517 aaPredicted RBP25.49■■□□□ 1.67
PFDN6-207ENST00000491382 CDC42BPBQ9Y5S2 1711 aa25.49■■□□□ 1.67
PFDN6-207ENST00000491382 EHBP1L1Q8N3D4 1523 aa25.47■■□□□ 1.67
PFDN6-207ENST00000491382 CDC42BPAQ5VT25 1732 aa25.46■■□□□ 1.67
PFDN6-207ENST00000491382 SCAPERQ9BY12 1400 aa25.44■■□□□ 1.66
PFDN6-207ENST00000491382 ZMYM4Q5VZL5 1548 aa25.42■■□□□ 1.66
PFDN6-207ENST00000491382 TIAM1Q13009 1591 aa25.41■■□□□ 1.66
PFDN6-207ENST00000491382 POGZQ7Z3K3 1410 aa25.4■■□□□ 1.66
PFDN6-207ENST00000491382 ARHGEF40Q8TER5 1519 aa25.38■■□□□ 1.65
PFDN6-207ENST00000491382 MAGI2Q86UL8 1455 aa25.36■■□□□ 1.65
PFDN6-207ENST00000491382 CCNB3Q8WWL7 1395 aa25.36■■□□□ 1.65
PFDN6-207ENST00000491382 KDM4FA0A1W2PPD8 638 aa25.36■■□□□ 1.65
PFDN6-207ENST00000491382 GPATCH8Q9UKJ3 1502 aaKnown RBP25.36■■□□□ 1.65
PFDN6-207ENST00000491382 ZNF518AQ6AHZ1 1483 aa25.35■■□□□ 1.65
PFDN6-207ENST00000491382 SUPT6HQ7KZ85 1726 aaKnown RBP25.35■■□□□ 1.65
PFDN6-207ENST00000491382 ITSN2Q9NZM3 1697 aa25.35■■□□□ 1.65
PFDN6-207ENST00000491382 ABCC1P33527 1531 aa25.34■■□□□ 1.65
PFDN6-207ENST00000491382 ZFYVE16Q7Z3T8 1539 aa25.34■■□□□ 1.65
PFDN6-207ENST00000491382 MAP3K1Q13233 1512 aa25.32■■□□□ 1.64
PFDN6-207ENST00000491382 KDM5CP41229 1560 aa25.3■■□□□ 1.64
PFDN6-207ENST00000491382 SAMD9LQ8IVG5 1584 aa25.29■■□□□ 1.64
PFDN6-207ENST00000491382 CFDP1Q9UEE9 299 aaPredicted RBP25.28■■□□□ 1.64
PFDN6-207ENST00000491382 LRRC9Q6ZRR7 1453 aa25.28■■□□□ 1.64
PFDN6-207ENST00000491382 ZNF777Q9ULD5 760 aaPredicted RBP25.27■■□□□ 1.64
PFDN6-207ENST00000491382 NCOA2Q15596 1464 aa25.27■■□□□ 1.64
PFDN6-207ENST00000491382 HECW2Q9P2P5 1572 aa25.27■■□□□ 1.64
PFDN6-207ENST00000491382 YEATS2Q9ULM3 1422 aa25.26■■□□□ 1.63
PFDN6-207ENST00000491382 PLEKHH2Q8IVE3 1493 aa25.26■■□□□ 1.63
PFDN6-207ENST00000491382 ARHGEF12Q9NZN5 1544 aa25.24■■□□□ 1.63
PFDN6-207ENST00000491382 APLP2Q06481 763 aa25.24■■□□□ 1.63
PFDN6-207ENST00000491382 AFAP1Q8N556 730 aa25.24■■□□□ 1.63
PFDN6-207ENST00000491382 SYCP2Q9BX26 1530 aa25.23■■□□□ 1.63
PFDN6-207ENST00000491382 ARID4BQ4LE39 1312 aaPredicted RBP25.23■■□□□ 1.63
PFDN6-207ENST00000491382 TRAPPC8Q9Y2L5 1435 aa25.21■■□□□ 1.63
PFDN6-207ENST00000491382 KIAA1107Q9UPP5 1409 aa25.2■■□□□ 1.63
PFDN6-207ENST00000491382 BCORL1Q5H9F3 1711 aa25.2■■□□□ 1.63
PFDN6-207ENST00000491382 MYT1LQ9UL68 1186 aa25.2■■□□□ 1.62
PFDN6-207ENST00000491382 MLH3Q9UHC1 1453 aa25.2■■□□□ 1.62
PFDN6-207ENST00000491382 ATP10AO60312 1499 aa25.19■■□□□ 1.62
PFDN6-207ENST00000491382 C9orf84Q5VXU9 1444 aa25.18■■□□□ 1.62
PFDN6-207ENST00000491382 ADAMTSL3P82987 1691 aa25.17■■□□□ 1.62
PFDN6-207ENST00000491382 DIP2CQ9Y2E4 1556 aa25.15■■□□□ 1.62
PFDN6-207ENST00000491382 HNRNPMP52272 730 aaKnown RBP eCLIP25.14■■□□□ 1.62
PFDN6-207ENST00000491382 KANK4Q5T7N3 995 aaPredicted RBP25.14■■□□□ 1.62
PFDN6-207ENST00000491382 ABCA6Q8N139 1617 aa25.14■■□□□ 1.61
PFDN6-207ENST00000491382 SIGLEC1Q9BZZ2 1709 aa25.14■■□□□ 1.61
PFDN6-207ENST00000491382 KIDINS220Q9ULH0 1771 aa25.13■■□□□ 1.61
PFDN6-207ENST00000491382 REREQ9P2R6 1566 aa25.11■■□□□ 1.61
PFDN6-207ENST00000491382 MADDQ8WXG6 1647 aa25.1■■□□□ 1.61
PFDN6-207ENST00000491382 SPAG9O60271 1321 aaKnown RBP25.1■■□□□ 1.61
PFDN6-207ENST00000491382 CAMSAP2Q08AD1 1489 aa25.09■■□□□ 1.61
PFDN6-207ENST00000491382 ZNF644Q9H582 1327 aaPredicted RBP25.09■■□□□ 1.61
PFDN6-207ENST00000491382 INO80Q9ULG1 1556 aaPredicted RBP25.08■■□□□ 1.61
PFDN6-207ENST00000491382 ATP7AQ04656 1500 aa25.07■■□□□ 1.6
PFDN6-207ENST00000491382 MBD5Q9P267 1494 aa25.06■■□□□ 1.6
PFDN6-207ENST00000491382 MYOM3Q5VTT5 1437 aa25.05■■□□□ 1.6
PFDN6-207ENST00000491382 RIMS1Q86UR5 1692 aaKnown RBP25.04■■□□□ 1.6
PFDN6-207ENST00000491382 MIA2Q96PC5 1412 aa25.03■■□□□ 1.6
PFDN6-207ENST00000491382 FER1L4A9Z1Z3 1794 aa25.03■■□□□ 1.6
PFDN6-207ENST00000491382 PTPRMP28827 1452 aa25.02■■□□□ 1.6
PFDN6-207ENST00000491382 CCDC141Q6ZP82 1450 aa25.02■■□□□ 1.6
PFDN6-207ENST00000491382 MLECQ14165 292 aa25.01■■□□□ 1.59
PFDN6-207ENST00000491382 RSPH4AQ5TD94 716 aa25.01■■□□□ 1.59
PFDN6-207ENST00000491382 AGLP35573 1532 aa25.01■■□□□ 1.59
PFDN6-207ENST00000491382 ARHGEF5Q12774 1597 aa25.01■■□□□ 1.59
PFDN6-207ENST00000491382 ADGBQ8N7X0 1667 aa24.99■■□□□ 1.59
PFDN6-207ENST00000491382 RTEL1-TNFRSF6BF6WH68 1400 aa24.98■■□□□ 1.59
PFDN6-207ENST00000491382 A2MP01023 1474 aa24.94■■□□□ 1.58
PFDN6-207ENST00000491382 PLXNC1O60486 1568 aa24.93■■□□□ 1.58
PFDN6-207ENST00000491382 PTPN23Q9H3S7 1636 aa24.92■■□□□ 1.58
PFDN6-207ENST00000491382 TSPY4P0CV99 314 aa24.91■■□□□ 1.58
PFDN6-207ENST00000491382 TSPY10P0CW01 314 aa24.91■■□□□ 1.58
PFDN6-207ENST00000491382 FGD6Q6ZV73 1430 aa24.89■■□□□ 1.58
PFDN6-207ENST00000491382 MAST1Q9Y2H9 1570 aa24.88■■□□□ 1.57
PFDN6-207ENST00000491382 ESF1Q9H501 851 aaKnown RBP24.86■■□□□ 1.57
PFDN6-207ENST00000491382 TCOF1Q13428 1488 aaKnown RBP24.84■■□□□ 1.57
PFDN6-207ENST00000491382 CROCC2H7BZ55 1655 aa24.84■■□□□ 1.57
PFDN6-207ENST00000491382 DHX29Q7Z478 1369 aaKnown RBP24.82■■□□□ 1.56
PFDN6-207ENST00000491382 PLPPR3Q6T4P5 718 aa24.82■■□□□ 1.56
PFDN6-207ENST00000491382 CNTLNQ9NXG0 1405 aa24.82■■□□□ 1.56
PFDN6-207ENST00000491382 DNMT1P26358 1616 aaKnown RBP24.8■■□□□ 1.56
PFDN6-207ENST00000491382 SHANK2Q9UPX8 1470 aa24.79■■□□□ 1.56
PFDN6-207ENST00000491382 MROH2AA6NES4 1674 aa24.78■■□□□ 1.56
PFDN6-207ENST00000491382 C3P01024 1663 aa24.78■■□□□ 1.56
PFDN6-207ENST00000491382 ABCC5O15440 1437 aa24.76■■□□□ 1.55
PFDN6-207ENST00000491382 DAPK1P53355 1430 aa24.76■■□□□ 1.55
PFDN6-207ENST00000491382 GGT6Q6P531 493 aa24.75■■□□□ 1.55
PFDN6-207ENST00000491382 CLTCQ00610 1675 aaKnown RBP24.75■■□□□ 1.55
PFDN6-207ENST00000491382 PPP6R1Q9UPN7 881 aa24.73■■□□□ 1.55
PFDN6-207ENST00000491382 PREX1Q8TCU6 1659 aa24.72■■□□□ 1.55
PFDN6-207ENST00000491382 KIF3BO15066 747 aa24.72■■□□□ 1.55
PFDN6-207ENST00000491382 CEBPAP49715 358 aaPredicted RBP24.72■■□□□ 1.55
PFDN6-207ENST00000491382 EIF2AK4Q9P2K8 1649 aaKnown RBP24.72■■□□□ 1.55
PFDN6-207ENST00000491382 LMTK3Q96Q04 1460 aa24.71■■□□□ 1.55
PFDN6-207ENST00000491382 DUOX2Q9NRD8 1548 aa24.71■■□□□ 1.55
PFDN6-207ENST00000491382 FAM50AQ14320 339 aaKnown RBP24.7■■□□□ 1.54
PFDN6-207ENST00000491382 FAM135AQ9P2D6 1515 aa24.7■■□□□ 1.54
PFDN6-207ENST00000491382 SETD1BQ9UPS6 1966 aaKnown RBP24.67■■□□□ 1.54
PFDN6-207ENST00000491382 RNF17Q9BXT8 1623 aaKnown RBP24.66■■□□□ 1.54
PFDN6-207ENST00000491382 ZMYM3Q14202 1370 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms