RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 SCAPERQ9BY12 1400 aa22.98■■□□□ 1.27
CTDSP1-210ENST00000491064 PLCH2O75038 1416 aa22.97■■□□□ 1.27
CTDSP1-210ENST00000491064 CERKQ8TCT0 537 aa22.96■■□□□ 1.27
CTDSP1-210ENST00000491064 ARHGEF12Q9NZN5 1544 aa22.94■■□□□ 1.26
CTDSP1-210ENST00000491064 ATP10AO60312 1499 aa22.92■■□□□ 1.26
CTDSP1-210ENST00000491064 PREX1Q8TCU6 1659 aa22.91■■□□□ 1.26
CTDSP1-210ENST00000491064 MYO5CQ9NQX4 1742 aa22.91■■□□□ 1.26
CTDSP1-210ENST00000491064 C9orf84Q5VXU9 1444 aa22.91■■□□□ 1.26
CTDSP1-210ENST00000491064 EFCAB2Q5VUJ9 269 aa22.86■■□□□ 1.25
CTDSP1-210ENST00000491064 KIF14Q15058 1648 aa22.83■■□□□ 1.25
CTDSP1-210ENST00000491064 CEBPAP49715 358 aaPredicted RBP22.83■■□□□ 1.25
CTDSP1-210ENST00000491064 STRCQ7RTU9 1775 aa22.83■■□□□ 1.24
CTDSP1-210ENST00000491064 ZNF518AQ6AHZ1 1483 aa22.82■■□□□ 1.24
CTDSP1-210ENST00000491064 KDM5CP41229 1560 aa22.81■■□□□ 1.24
CTDSP1-210ENST00000491064 SETD1BQ9UPS6 1966 aaKnown RBP22.81■■□□□ 1.24
CTDSP1-210ENST00000491064 FMN1Q68DA7 1419 aa22.81■■□□□ 1.24
CTDSP1-210ENST00000491064 ATP1B4Q9UN42 357 aaPredicted RBP22.79■■□□□ 1.24
CTDSP1-210ENST00000491064 CDK11AQ9UQ88 783 aaPredicted RBP22.78■■□□□ 1.24
CTDSP1-210ENST00000491064 ARHGAP5Q13017 1502 aa22.77■■□□□ 1.24
CTDSP1-210ENST00000491064 ARHGAP35Q9NRY4 1499 aa22.77■■□□□ 1.24
CTDSP1-210ENST00000491064 DIP2CQ9Y2E4 1556 aa22.76■■□□□ 1.23
CTDSP1-210ENST00000491064 UHRF1BP1Q6BDS2 1440 aa22.76■■□□□ 1.23
CTDSP1-210ENST00000491064 AFAP1Q8N556 730 aa22.76■■□□□ 1.23
CTDSP1-210ENST00000491064 DMRT2Q9Y5R5 561 aa22.76■■□□□ 1.23
CTDSP1-210ENST00000491064 TROQ12816 1431 aaPredicted RBP22.75■■□□□ 1.23
CTDSP1-210ENST00000491064 REREQ9P2R6 1566 aa22.75■■□□□ 1.23
CTDSP1-210ENST00000491064 LRRIQ1Q96JM4 1722 aa22.72■■□□□ 1.23
CTDSP1-210ENST00000491064 ABCA6Q8N139 1617 aa22.71■■□□□ 1.23
CTDSP1-210ENST00000491064 C3P01024 1663 aa22.71■■□□□ 1.23
CTDSP1-210ENST00000491064 CDC42BPBQ9Y5S2 1711 aa22.71■■□□□ 1.23
CTDSP1-210ENST00000491064 UBTFP17480 764 aaKnown RBP22.71■■□□□ 1.23
CTDSP1-210ENST00000491064 CLIP1P30622 1438 aa22.71■■□□□ 1.23
CTDSP1-210ENST00000491064 MYT1LQ9UL68 1186 aa22.7■■□□□ 1.22
CTDSP1-210ENST00000491064 MLH3Q9UHC1 1453 aa22.69■■□□□ 1.22
CTDSP1-210ENST00000491064 DISP3Q9P2K9 1392 aa22.69■■□□□ 1.22
CTDSP1-210ENST00000491064 EHMT2Q96KQ7 1210 aa22.69■■□□□ 1.22
CTDSP1-210ENST00000491064 PTPRTO14522 1441 aa22.67■■□□□ 1.22
CTDSP1-210ENST00000491064 ILDR2Q71H61 639 aa22.67■■□□□ 1.22
CTDSP1-210ENST00000491064 AGLP35573 1532 aa22.67■■□□□ 1.22
CTDSP1-210ENST00000491064 PREX2Q70Z35 1606 aa22.65■■□□□ 1.22
CTDSP1-210ENST00000491064 ABCC1P33527 1531 aa22.64■■□□□ 1.21
CTDSP1-210ENST00000491064 ITSN2Q9NZM3 1697 aa22.64■■□□□ 1.21
CTDSP1-210ENST00000491064 TRAPPC8Q9Y2L5 1435 aa22.64■■□□□ 1.21
CTDSP1-210ENST00000491064 KIDINS220Q9ULH0 1771 aa22.61■■□□□ 1.21
CTDSP1-210ENST00000491064 LTBP4Q8N2S1 1624 aa22.6■■□□□ 1.21
CTDSP1-210ENST00000491064 ESF1Q9H501 851 aaKnown RBP22.6■■□□□ 1.21
CTDSP1-210ENST00000491064 SOCS7O14512 581 aa22.59■■□□□ 1.21
CTDSP1-210ENST00000491064 NCOA1Q15788 1441 aa22.57■■□□□ 1.2
CTDSP1-210ENST00000491064 CNTLNQ9NXG0 1405 aa22.57■■□□□ 1.2
CTDSP1-210ENST00000491064 SPATA31D1Q6ZQQ2 1576 aa22.57■■□□□ 1.2
CTDSP1-210ENST00000491064 CDC42BPAQ5VT25 1732 aa22.57■■□□□ 1.2
CTDSP1-210ENST00000491064 IQSEC2Q5JU85 1478 aa22.55■■□□□ 1.2
CTDSP1-210ENST00000491064 CCDC18Q5T9S5 1454 aa22.54■■□□□ 1.2
CTDSP1-210ENST00000491064 CASKIN1Q8WXD9 1431 aa22.53■■□□□ 1.2
CTDSP1-210ENST00000491064 MROH2AA6NES4 1674 aa22.52■■□□□ 1.2
CTDSP1-210ENST00000491064 SAMD9LQ8IVG5 1584 aa22.51■■□□□ 1.19
CTDSP1-210ENST00000491064 CAMSAP1Q5T5Y3 1602 aa22.5■■□□□ 1.19
CTDSP1-210ENST00000491064 NPATQ14207 1427 aa22.5■■□□□ 1.19
CTDSP1-210ENST00000491064 ZMYM3Q14202 1370 aa22.46■■□□□ 1.19
CTDSP1-210ENST00000491064 SYCP2Q9BX26 1530 aa22.46■■□□□ 1.19
CTDSP1-210ENST00000491064 SUPT6HQ7KZ85 1726 aaKnown RBP22.45■■□□□ 1.19
CTDSP1-210ENST00000491064 ZNF777Q9ULD5 760 aaPredicted RBP22.43■■□□□ 1.18
CTDSP1-210ENST00000491064 CLTCQ00610 1675 aaKnown RBP22.42■■□□□ 1.18
CTDSP1-210ENST00000491064 SPAG9O60271 1321 aaKnown RBP22.42■■□□□ 1.18
CTDSP1-210ENST00000491064 ZNF142P52746 1687 aaPredicted RBP22.42■■□□□ 1.18
CTDSP1-210ENST00000491064 GPATCH8Q9UKJ3 1502 aaKnown RBP22.41■■□□□ 1.18
CTDSP1-210ENST00000491064 FYCO1Q9BQS8 1478 aa22.41■■□□□ 1.18
CTDSP1-210ENST00000491064 NCKAP5LQ9HCH0 1330 aa22.41■■□□□ 1.18
CTDSP1-210ENST00000491064 PLXNC1O60486 1568 aa22.41■■□□□ 1.18
CTDSP1-210ENST00000491064 ATP7AQ04656 1500 aa22.41■■□□□ 1.18
CTDSP1-210ENST00000491064 MYO3AQ8NEV4 1616 aa22.4■■□□□ 1.18
CTDSP1-210ENST00000491064 ZNF335Q9H4Z2 1342 aaPredicted RBP22.39■■□□□ 1.18
CTDSP1-210ENST00000491064 INO80Q9ULG1 1556 aaPredicted RBP22.39■■□□□ 1.18
CTDSP1-210ENST00000491064 HNRNPMP52272 730 aaKnown RBP eCLIP22.39■■□□□ 1.17
CTDSP1-210ENST00000491064 CHIC1Q5VXU3 224 aa22.39■■□□□ 1.17
CTDSP1-210ENST00000491064 PLA2R1Q13018 1463 aa22.38■■□□□ 1.17
CTDSP1-210ENST00000491064 CEP170BQ9Y4F5 1589 aaPredicted RBP22.37■■□□□ 1.17
CTDSP1-210ENST00000491064 A2MP01023 1474 aa22.36■■□□□ 1.17
CTDSP1-210ENST00000491064 PTPRKQ15262 1439 aa22.36■■□□□ 1.17
CTDSP1-210ENST00000491064 KIAA1107Q9UPP5 1409 aa22.36■■□□□ 1.17
CTDSP1-210ENST00000491064 TCOF1Q13428 1488 aaKnown RBP22.35■■□□□ 1.17
CTDSP1-210ENST00000491064 PKD2Q13563 968 aa22.35■■□□□ 1.17
CTDSP1-210ENST00000491064 UBAP1LF5GYI3 381 aa22.34■■□□□ 1.17
CTDSP1-210ENST00000491064 PLEKHH2Q8IVE3 1493 aa22.34■■□□□ 1.17
CTDSP1-210ENST00000491064 CFDP1Q9UEE9 299 aaPredicted RBP22.31■■□□□ 1.16
CTDSP1-210ENST00000491064 GGT6Q6P531 493 aa22.3■■□□□ 1.16
CTDSP1-210ENST00000491064 ADGBQ8N7X0 1667 aa22.3■■□□□ 1.16
CTDSP1-210ENST00000491064 CCNB3Q8WWL7 1395 aa22.28■■□□□ 1.16
CTDSP1-210ENST00000491064 PPP6R1Q9UPN7 881 aa22.26■■□□□ 1.15
CTDSP1-210ENST00000491064 DNMT1P26358 1616 aaKnown RBP22.25■■□□□ 1.15
CTDSP1-210ENST00000491064 A2ML1A8K2U0 1454 aa22.24■■□□□ 1.15
CTDSP1-210ENST00000491064 MTUS2Q5JR59 1369 aa22.22■■□□□ 1.15
CTDSP1-210ENST00000491064 MBD5Q9P267 1494 aa22.21■■□□□ 1.15
CTDSP1-210ENST00000491064 TIAM1Q13009 1591 aa22.21■■□□□ 1.15
CTDSP1-210ENST00000491064 POLR1AO95602 1720 aaPredicted RBP22.2■■□□□ 1.14
CTDSP1-210ENST00000491064 ZNF644Q9H582 1327 aaPredicted RBP22.2■■□□□ 1.14
CTDSP1-210ENST00000491064 NEURL4Q96JN8 1562 aa22.18■■□□□ 1.14
CTDSP1-210ENST00000491064 RTEL1-TNFRSF6BF6WH68 1400 aa22.18■■□□□ 1.14
CTDSP1-210ENST00000491064 DHX29Q7Z478 1369 aaKnown RBP22.16■■□□□ 1.14
CTDSP1-210ENST00000491064 CPS1P31327 1500 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms