RNA–Protein interactions for RNA: ENST00000490537.6

EXOSC8-210, Transcript of exosome component 8, humanhuman

TSL 1 (best)

Gene EXOSC8, Length 2,423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8-210ENST00000490537 HECW1Q76N89 1606 aa11.95□□□□□ -0.5
EXOSC8-210ENST00000490537 ZNF335Q9H4Z2 1342 aaPredicted RBP11.95□□□□□ -0.5
EXOSC8-210ENST00000490537 GOLGA3Q08378 1498 aa11.95□□□□□ -0.5
EXOSC8-210ENST00000490537 EFCAB5A4FU69 1503 aa11.95□□□□□ -0.5
EXOSC8-210ENST00000490537 SRCAPQ6ZRS2 3230 aa11.94□□□□□ -0.5
EXOSC8-210ENST00000490537 P3H3Q8IVL6 736 aa11.94□□□□□ -0.5
EXOSC8-210ENST00000490537 NCOA1Q15788 1441 aa11.92□□□□□ -0.5
EXOSC8-210ENST00000490537 C3P01024 1663 aa11.9□□□□□ -0.5
EXOSC8-210ENST00000490537 MAGI2Q86UL8 1455 aa11.9□□□□□ -0.5
EXOSC8-210ENST00000490537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.89□□□□□ -0.51
EXOSC8-210ENST00000490537 HNRNPUL2Q1KMD3 747 aaKnown RBP11.89□□□□□ -0.51
EXOSC8-210ENST00000490537 ATP10AO60312 1499 aa11.88□□□□□ -0.51
EXOSC8-210ENST00000490537 SCAF1Q9H7N4 1312 aaKnown RBP11.88□□□□□ -0.51
EXOSC8-210ENST00000490537 PIP4K2BP78356 416 aa11.88□□□□□ -0.51
EXOSC8-210ENST00000490537 PHF23Q9BUL5 403 aaPredicted RBP11.88□□□□□ -0.51
EXOSC8-210ENST00000490537 NCKAP5LQ9HCH0 1330 aa11.87□□□□□ -0.51
EXOSC8-210ENST00000490537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.86□□□□□ -0.51
EXOSC8-210ENST00000490537 C9orf84Q5VXU9 1444 aa11.86□□□□□ -0.51
EXOSC8-210ENST00000490537 CFAP74Q9C0B2 1584 aa11.86□□□□□ -0.51
EXOSC8-210ENST00000490537 CAMSAP1Q5T5Y3 1602 aa11.86□□□□□ -0.51
EXOSC8-210ENST00000490537 RAPGEF6Q8TEU7 1601 aa11.85□□□□□ -0.51
EXOSC8-210ENST00000490537 SCAPERQ9BY12 1400 aa11.85□□□□□ -0.51
EXOSC8-210ENST00000490537 RGS17Q9UGC6 210 aaPredicted RBP11.84□□□□□ -0.51
EXOSC8-210ENST00000490537 NUP153P49790 1475 aaKnown RBP11.84□□□□□ -0.51
EXOSC8-210ENST00000490537 TRAPPC8Q9Y2L5 1435 aa11.83□□□□□ -0.52
EXOSC8-210ENST00000490537 SENP3Q9H4L4 574 aaPredicted RBP11.8□□□□□ -0.52
EXOSC8-210ENST00000490537 ALKQ9UM73 1620 aa11.78□□□□□ -0.52
EXOSC8-210ENST00000490537 PLEKHD1A6NEE1 506 aa11.78□□□□□ -0.52
EXOSC8-210ENST00000490537 DIP2CQ9Y2E4 1556 aa11.76□□□□□ -0.53
EXOSC8-210ENST00000490537 AFAP1Q8N556 730 aa11.76□□□□□ -0.53
EXOSC8-210ENST00000490537 SAMD9Q5K651 1589 aa11.76□□□□□ -0.53
EXOSC8-210ENST00000490537 TOM1O60784 492 aa11.75□□□□□ -0.53
EXOSC8-210ENST00000490537 FAM9AQ8IZU1 332 aaPredicted RBP11.75□□□□□ -0.53
EXOSC8-210ENST00000490537 PLCH2O75038 1416 aa11.74□□□□□ -0.53
EXOSC8-210ENST00000490537 TCOF1Q13428 1488 aaKnown RBP11.74□□□□□ -0.53
EXOSC8-210ENST00000490537 ABCA6Q8N139 1617 aa11.73□□□□□ -0.53
EXOSC8-210ENST00000490537 POTEAQ6S8J7 498 aa11.72□□□□□ -0.53
EXOSC8-210ENST00000490537 PRXQ9BXM0 1461 aa11.72□□□□□ -0.53
EXOSC8-210ENST00000490537 PPP6R1Q9UPN7 881 aa11.72□□□□□ -0.53
EXOSC8-210ENST00000490537 KDM5CP41229 1560 aa11.72□□□□□ -0.53
EXOSC8-210ENST00000490537 SETD1AO15047 1707 aaKnown RBP11.72□□□□□ -0.53
EXOSC8-210ENST00000490537 SUPT6HQ7KZ85 1726 aaKnown RBP11.72□□□□□ -0.53
EXOSC8-210ENST00000490537 PKD2Q13563 968 aa11.71□□□□□ -0.54
EXOSC8-210ENST00000490537 ESF1Q9H501 851 aaKnown RBP11.71□□□□□ -0.54
EXOSC8-210ENST00000490537 REREQ9P2R6 1566 aa11.7□□□□□ -0.54
EXOSC8-210ENST00000490537 PLA2R1Q13018 1463 aa11.7□□□□□ -0.54
EXOSC8-210ENST00000490537 MYT1LQ9UL68 1186 aa11.7□□□□□ -0.54
EXOSC8-210ENST00000490537 AGLP35573 1532 aa11.7□□□□□ -0.54
EXOSC8-210ENST00000490537 ZNF518AQ6AHZ1 1483 aa11.69□□□□□ -0.54
EXOSC8-210ENST00000490537 MYO3AQ8NEV4 1616 aa11.69□□□□□ -0.54
EXOSC8-210ENST00000490537 ZNF142P52746 1687 aaPredicted RBP11.69□□□□□ -0.54
EXOSC8-210ENST00000490537 NPATQ14207 1427 aa11.69□□□□□ -0.54
EXOSC8-210ENST00000490537 CDK13Q14004 1512 aaKnown RBP11.68□□□□□ -0.54
EXOSC8-210ENST00000490537 RANGAP1P46060 587 aaPredicted RBP11.68□□□□□ -0.54
EXOSC8-210ENST00000490537 CEP170BQ9Y4F5 1589 aaPredicted RBP11.67□□□□□ -0.54
EXOSC8-210ENST00000490537 EFCAB2Q5VUJ9 269 aa11.67□□□□□ -0.54
EXOSC8-210ENST00000490537 ZMYM3Q14202 1370 aa11.67□□□□□ -0.54
EXOSC8-210ENST00000490537 SHANK2Q9UPX8 1470 aa11.67□□□□□ -0.54
EXOSC8-210ENST00000490537 CPS1P31327 1500 aa11.67□□□□□ -0.54
EXOSC8-210ENST00000490537 MYO5CQ9NQX4 1742 aa11.67□□□□□ -0.54
EXOSC8-210ENST00000490537 CNTLNQ9NXG0 1405 aa11.66□□□□□ -0.54
EXOSC8-210ENST00000490537 MROH2AA6NES4 1674 aa11.65□□□□□ -0.54
EXOSC8-210ENST00000490537 NEURL4Q96JN8 1562 aa11.65□□□□□ -0.55
EXOSC8-210ENST00000490537 MLH3Q9UHC1 1453 aa11.63□□□□□ -0.55
EXOSC8-210ENST00000490537 PTPRKQ15262 1439 aa11.63□□□□□ -0.55
EXOSC8-210ENST00000490537 VWDEQ8N2E2 1590 aa11.63□□□□□ -0.55
EXOSC8-210ENST00000490537 KIF14Q15058 1648 aa11.63□□□□□ -0.55
EXOSC8-210ENST00000490537 CLTCQ00610 1675 aaKnown RBP11.62□□□□□ -0.55
EXOSC8-210ENST00000490537 KIDINS220Q9ULH0 1771 aa11.62□□□□□ -0.55
EXOSC8-210ENST00000490537 STRCP1A6NGW2 1772 aa11.61□□□□□ -0.55
EXOSC8-210ENST00000490537 ARHGAP5Q13017 1502 aa11.6□□□□□ -0.55
EXOSC8-210ENST00000490537 DNMT1P26358 1616 aaKnown RBP11.6□□□□□ -0.55
EXOSC8-210ENST00000490537 POLR1AO95602 1720 aaPredicted RBP11.6□□□□□ -0.55
EXOSC8-210ENST00000490537 CDC42BPBQ9Y5S2 1711 aa11.57□□□□□ -0.56
EXOSC8-210ENST00000490537 UPF1Q92900 1129 aaKnown RBP eCLIP11.57□□□□□ -0.56
EXOSC8-210ENST00000490537 A2ML1A8K2U0 1454 aa11.56□□□□□ -0.56
EXOSC8-210ENST00000490537 LRRC7Q96NW7 1537 aa11.56□□□□□ -0.56
EXOSC8-210ENST00000490537 ITSN2Q9NZM3 1697 aa11.55□□□□□ -0.56
EXOSC8-210ENST00000490537 ABCC1P33527 1531 aa11.54□□□□□ -0.56
EXOSC8-210ENST00000490537 RNF17Q9BXT8 1623 aaKnown RBP11.54□□□□□ -0.56
EXOSC8-210ENST00000490537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.52□□□□□ -0.57
EXOSC8-210ENST00000490537 FBXO31Q5XUX0 539 aaPredicted RBP11.5□□□□□ -0.57
EXOSC8-210ENST00000490537 GGT6Q6P531 493 aa11.5□□□□□ -0.57
EXOSC8-210ENST00000490537 ATP1B4Q9UN42 357 aaPredicted RBP11.5□□□□□ -0.57
EXOSC8-210ENST00000490537 SAMD9LQ8IVG5 1584 aa11.5□□□□□ -0.57
EXOSC8-210ENST00000490537 NPHP4O75161 1426 aaPredicted RBP11.49□□□□□ -0.57
EXOSC8-210ENST00000490537 XIRP1Q702N8 1843 aaKnown RBP11.49□□□□□ -0.57
EXOSC8-210ENST00000490537 ANKLE2Q86XL3 938 aa11.48□□□□□ -0.57
EXOSC8-210ENST00000490537 PLXNC1O60486 1568 aa11.48□□□□□ -0.57
EXOSC8-210ENST00000490537 TROQ12816 1431 aaPredicted RBP11.48□□□□□ -0.57
EXOSC8-210ENST00000490537 MED14O60244 1454 aa11.48□□□□□ -0.57
EXOSC8-210ENST00000490537 PREX2Q70Z35 1606 aa11.47□□□□□ -0.57
EXOSC8-210ENST00000490537 IQGAP1P46940 1657 aa11.47□□□□□ -0.57
EXOSC8-210ENST00000490537 TRIM52Q96A61 297 aa11.46□□□□□ -0.57
EXOSC8-210ENST00000490537 LRRIQ1Q96JM4 1722 aa11.46□□□□□ -0.57
EXOSC8-210ENST00000490537 SYNMO15061 1565 aa11.46□□□□□ -0.58
EXOSC8-210ENST00000490537 DEPDC5O75140 1603 aa11.45□□□□□ -0.58
EXOSC8-210ENST00000490537 TNRQ92752 1358 aa11.45□□□□□ -0.58
EXOSC8-210ENST00000490537 CSRNP3Q8WYN3 585 aa11.44□□□□□ -0.58
EXOSC8-210ENST00000490537 A2MP01023 1474 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms