RNA–Protein interactions for RNA: ENST00000489764.1

SLC6A9-208, Transcript of solute carrier family 6 member 9, humanhuman

TSL 3

Gene SLC6A9, Length 930 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9-208ENST00000489764 KIF14Q15058 1648 aa30.36■■■□□ 2.45
SLC6A9-208ENST00000489764 ZFYVE16Q7Z3T8 1539 aa30.36■■■□□ 2.45
SLC6A9-208ENST00000489764 MADDQ8WXG6 1647 aa30.36■■■□□ 2.45
SLC6A9-208ENST00000489764 CLIP1P30622 1438 aa30.33■■■□□ 2.45
SLC6A9-208ENST00000489764 CASKIN1Q8WXD9 1431 aa30.33■■■□□ 2.45
SLC6A9-208ENST00000489764 LRRIQ1Q96JM4 1722 aa30.31■■■□□ 2.44
SLC6A9-208ENST00000489764 MYO5CQ9NQX4 1742 aa30.3■■■□□ 2.44
SLC6A9-208ENST00000489764 AFAP1Q8N556 730 aa30.29■■■□□ 2.44
SLC6A9-208ENST00000489764 SIGLEC1Q9BZZ2 1709 aa30.28■■■□□ 2.44
SLC6A9-208ENST00000489764 MLECQ14165 292 aa30.28■■■□□ 2.44
SLC6A9-208ENST00000489764 ARHGAP5Q13017 1502 aa30.26■■■□□ 2.43
SLC6A9-208ENST00000489764 ATP10AO60312 1499 aa30.25■■■□□ 2.43
SLC6A9-208ENST00000489764 PCF11O94913 1555 aaKnown RBP30.24■■■□□ 2.43
SLC6A9-208ENST00000489764 CCDC18Q5T9S5 1454 aa30.23■■■□□ 2.43
SLC6A9-208ENST00000489764 RIMS1Q86UR5 1692 aaKnown RBP30.23■■■□□ 2.43
SLC6A9-208ENST00000489764 PLPPR3Q6T4P5 718 aa30.22■■■□□ 2.43
SLC6A9-208ENST00000489764 ZNF518AQ6AHZ1 1483 aa30.2■■■□□ 2.43
SLC6A9-208ENST00000489764 C9orf84Q5VXU9 1444 aa30.19■■■□□ 2.42
SLC6A9-208ENST00000489764 LMTK3Q96Q04 1460 aa30.18■■■□□ 2.42
SLC6A9-208ENST00000489764 FYCO1Q9BQS8 1478 aa30.16■■■□□ 2.42
SLC6A9-208ENST00000489764 MYT1LQ9UL68 1186 aa30.15■■■□□ 2.42
SLC6A9-208ENST00000489764 CDC42BPBQ9Y5S2 1711 aa30.15■■■□□ 2.42
SLC6A9-208ENST00000489764 KDM5CP41229 1560 aa30.13■■■□□ 2.41
SLC6A9-208ENST00000489764 ARHGEF12Q9NZN5 1544 aa30.12■■■□□ 2.41
SLC6A9-208ENST00000489764 TRAPPC8Q9Y2L5 1435 aa30.12■■■□□ 2.41
SLC6A9-208ENST00000489764 HSPA2P54652 639 aa30.1■■■□□ 2.41
SLC6A9-208ENST00000489764 MLH3Q9UHC1 1453 aa30.08■■■□□ 2.41
SLC6A9-208ENST00000489764 PREX2Q70Z35 1606 aa30.07■■■□□ 2.4
SLC6A9-208ENST00000489764 CEBPAP49715 358 aaPredicted RBP30.05■■■□□ 2.4
SLC6A9-208ENST00000489764 ZNF777Q9ULD5 760 aaPredicted RBP30.04■■■□□ 2.4
SLC6A9-208ENST00000489764 ABCC1P33527 1531 aa30.04■■■□□ 2.4
SLC6A9-208ENST00000489764 FER1L4A9Z1Z3 1794 aa30.03■■■□□ 2.4
SLC6A9-208ENST00000489764 DIP2CQ9Y2E4 1556 aa30.03■■■□□ 2.4
SLC6A9-208ENST00000489764 GPATCH8Q9UKJ3 1502 aaKnown RBP30.01■■■□□ 2.4
SLC6A9-208ENST00000489764 CDC42BPAQ5VT25 1732 aa29.99■■■□□ 2.39
SLC6A9-208ENST00000489764 HNRNPMP52272 730 aaKnown RBP eCLIP29.97■■■□□ 2.39
SLC6A9-208ENST00000489764 REREQ9P2R6 1566 aa29.97■■■□□ 2.39
SLC6A9-208ENST00000489764 ABCA6Q8N139 1617 aa29.96■■■□□ 2.39
SLC6A9-208ENST00000489764 ITSN2Q9NZM3 1697 aa29.95■■■□□ 2.39
SLC6A9-208ENST00000489764 FBXO41Q8TF61 875 aa29.95■■■□□ 2.39
SLC6A9-208ENST00000489764 CFDP1Q9UEE9 299 aaPredicted RBP29.95■■■□□ 2.39
SLC6A9-208ENST00000489764 MTUS2Q5JR59 1369 aa29.92■■■□□ 2.38
SLC6A9-208ENST00000489764 AGLP35573 1532 aa29.91■■■□□ 2.38
SLC6A9-208ENST00000489764 CCNB3Q8WWL7 1395 aa29.91■■■□□ 2.38
SLC6A9-208ENST00000489764 SAMD9LQ8IVG5 1584 aa29.91■■■□□ 2.38
SLC6A9-208ENST00000489764 SPAG9O60271 1321 aaKnown RBP29.9■■■□□ 2.38
SLC6A9-208ENST00000489764 KIDINS220Q9ULH0 1771 aa29.9■■■□□ 2.38
SLC6A9-208ENST00000489764 KIAA1107Q9UPP5 1409 aa29.88■■■□□ 2.37
SLC6A9-208ENST00000489764 CEP162Q5TB80 1403 aa29.87■■■□□ 2.37
SLC6A9-208ENST00000489764 SYCP2Q9BX26 1530 aa29.86■■■□□ 2.37
SLC6A9-208ENST00000489764 ESF1Q9H501 851 aaKnown RBP29.85■■■□□ 2.37
SLC6A9-208ENST00000489764 ZNF644Q9H582 1327 aaPredicted RBP29.82■■■□□ 2.36
SLC6A9-208ENST00000489764 PLEKHH2Q8IVE3 1493 aa29.81■■■□□ 2.36
SLC6A9-208ENST00000489764 PREX1Q8TCU6 1659 aa29.79■■■□□ 2.36
SLC6A9-208ENST00000489764 UHRF1BP1Q6BDS2 1440 aa29.77■■■□□ 2.36
SLC6A9-208ENST00000489764 SETD1BQ9UPS6 1966 aaKnown RBP29.76■■■□□ 2.35
SLC6A9-208ENST00000489764 LOC105371045A0A1W2PR82 267 aa29.76■■■□□ 2.35
SLC6A9-208ENST00000489764 CNTLNQ9NXG0 1405 aa29.74■■■□□ 2.35
SLC6A9-208ENST00000489764 C3P01024 1663 aa29.73■■■□□ 2.35
SLC6A9-208ENST00000489764 ATP7AQ04656 1500 aa29.73■■■□□ 2.35
SLC6A9-208ENST00000489764 EHBP1L1Q8N3D4 1523 aa29.73■■■□□ 2.35
SLC6A9-208ENST00000489764 TIAM1Q13009 1591 aa29.72■■■□□ 2.35
SLC6A9-208ENST00000489764 CERKQ8TCT0 537 aa29.71■■■□□ 2.35
SLC6A9-208ENST00000489764 MBD5Q9P267 1494 aa29.71■■■□□ 2.35
SLC6A9-208ENST00000489764 A2MP01023 1474 aa29.7■■■□□ 2.35
SLC6A9-208ENST00000489764 ZMYM3Q14202 1370 aa29.7■■■□□ 2.35
SLC6A9-208ENST00000489764 DMRT2Q9Y5R5 561 aa29.7■■■□□ 2.35
SLC6A9-208ENST00000489764 INO80Q9ULG1 1556 aaPredicted RBP29.69■■■□□ 2.34
SLC6A9-208ENST00000489764 GGT6Q6P531 493 aa29.66■■■□□ 2.34
SLC6A9-208ENST00000489764 SUPT6HQ7KZ85 1726 aaKnown RBP29.65■■■□□ 2.34
SLC6A9-208ENST00000489764 STRCQ7RTU9 1775 aa29.64■■■□□ 2.34
SLC6A9-208ENST00000489764 PLXNC1O60486 1568 aa29.64■■■□□ 2.33
SLC6A9-208ENST00000489764 NCOA2Q15596 1464 aa29.62■■■□□ 2.33
SLC6A9-208ENST00000489764 RTEL1-TNFRSF6BF6WH68 1400 aa29.61■■■□□ 2.33
SLC6A9-208ENST00000489764 PPP6R1Q9UPN7 881 aa29.6■■■□□ 2.33
SLC6A9-208ENST00000489764 NPATQ14207 1427 aa29.6■■■□□ 2.33
SLC6A9-208ENST00000489764 DHX29Q7Z478 1369 aaKnown RBP29.57■■■□□ 2.32
SLC6A9-208ENST00000489764 RSPH4AQ5TD94 716 aa29.57■■■□□ 2.32
SLC6A9-208ENST00000489764 MROH2AA6NES4 1674 aa29.56■■■□□ 2.32
SLC6A9-208ENST00000489764 PTPRTO14522 1441 aa29.55■■■□□ 2.32
SLC6A9-208ENST00000489764 VPS8Q8N3P4 1428 aa29.55■■■□□ 2.32
SLC6A9-208ENST00000489764 CAMSAP2Q08AD1 1489 aa29.52■■■□□ 2.32
SLC6A9-208ENST00000489764 ADGBQ8N7X0 1667 aa29.52■■■□□ 2.32
SLC6A9-208ENST00000489764 PTPRKQ15262 1439 aa29.52■■■□□ 2.32
SLC6A9-208ENST00000489764 CLTCQ00610 1675 aaKnown RBP29.51■■■□□ 2.31
SLC6A9-208ENST00000489764 NCOA1Q15788 1441 aa29.51■■■□□ 2.31
SLC6A9-208ENST00000489764 CCDC141Q6ZP82 1450 aa29.5■■■□□ 2.31
SLC6A9-208ENST00000489764 KANK4Q5T7N3 995 aaPredicted RBP29.5■■■□□ 2.31
SLC6A9-208ENST00000489764 LRRC9Q6ZRR7 1453 aa29.49■■■□□ 2.31
SLC6A9-208ENST00000489764 KIF3BO15066 747 aa29.48■■■□□ 2.31
SLC6A9-208ENST00000489764 TSPY4P0CV99 314 aa29.45■■■□□ 2.31
SLC6A9-208ENST00000489764 TSPY10P0CW01 314 aa29.45■■■□□ 2.31
SLC6A9-208ENST00000489764 NCKAP5LQ9HCH0 1330 aa29.45■■■□□ 2.3
SLC6A9-208ENST00000489764 CAMSAP1Q5T5Y3 1602 aa29.43■■■□□ 2.3
SLC6A9-208ENST00000489764 MAP3K1Q13233 1512 aa29.4■■■□□ 2.3
SLC6A9-208ENST00000489764 FBXO31Q5XUX0 539 aaPredicted RBP29.39■■■□□ 2.3
SLC6A9-208ENST00000489764 ARHGEF5Q12774 1597 aa29.39■■■□□ 2.29
SLC6A9-208ENST00000489764 PKD2Q13563 968 aa29.36■■■□□ 2.29
SLC6A9-208ENST00000489764 WASHC2CQ9Y4E1 1318 aa29.36■■■□□ 2.29
SLC6A9-208ENST00000489764 LTBP4Q8N2S1 1624 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms